FFCP PHASE1:Mm9::chr17:86020156..86020183,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20473|HGNC=|MCL_coexpression_id=492|UniProt=Q62233|association_with_transcript=0bp_to_ENSMUST00000162436,NM_011381,uc008dub.2_5end|description=CAGE_peak_1_at_Six3_5end|id=chr17:86020156..86020183,+|ontology_enrichment_celltype=CL:0002319!2.12e-07!43;CL:0000117!2.15e-07!23;CL:0000337!2.15e-07!23;CL:0000221!4.36e-07!44;CL:0000133!4.36e-07!44|ontology_enrichment_celltype_v019_2=CL:0002453,3.75e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!7.24e-25!49;UBERON:0000033!3.04e-20!63;UBERON:0003080!1.90e-15!40;UBERON:0002780!1.26e-14!39;UBERON:0001890!1.26e-14!39;UBERON:0006240!1.26e-14!39;UBERON:0002616!2.36e-14!49;UBERON:0002346!2.77e-14!71;UBERON:0003075!2.77e-14!71;UBERON:0007284!2.77e-14!71;UBERON:0000955!7.28e-14!50;UBERON:0006238!7.28e-14!50;UBERON:0004121!1.02e-13!102;UBERON:0000924!1.02e-13!102;UBERON:0006601!1.02e-13!102;UBERON:0001017!4.91e-13!73;UBERON:0005743!4.91e-13!73;UBERON:0000073!2.30e-12!75;UBERON:0001016!2.30e-12!75;UBERON:0001894!7.08e-12!10;UBERON:0006222!7.08e-12!10;UBERON:0000970!1.08e-11!9;UBERON:0000019!1.08e-11!9;UBERON:0000047!1.08e-11!9;UBERON:0004088!1.08e-11!9;UBERON:0002104!1.08e-11!9;UBERON:0001456!1.08e-11!9;UBERON:0003072!1.08e-11!9;UBERON:0003071!1.08e-11!9;UBERON:0004128!1.08e-11!9;UBERON:0007811!2.63e-11!86;UBERON:0001049!7.81e-11!52;UBERON:0005068!7.81e-11!52;UBERON:0006241!7.81e-11!52;UBERON:0007135!7.81e-11!52;UBERON:0000007!4.23e-10!8;UBERON:0003296!4.23e-10!8;UBERON:0010133!4.23e-10!8;UBERON:0000153!2.64e-09!94;UBERON:0001444!4.91e-09!11;UBERON:0000020!4.78e-08!12;UBERON:0001032!4.78e-08!12;UBERON:0004456!4.78e-08!12;UBERON:0001954!1.70e-07!7;UBERON:0003022!1.70e-07!7;UBERON:0002421!1.70e-07!7;UBERON:0000349!1.70e-07!7;UBERON:0002600!1.70e-07!7;UBERON:0005085!3.24e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.65e-23,49;UBERON:0002346,7.91e-17,64;UBERON:0003075,7.91e-17,64;UBERON:0007284,7.91e-17,64;UBERON:0004121,4.63e-16,95;UBERON:0000924,4.63e-16,95;UBERON:0006601,4.63e-16,95;UBERON:0001894,8.00e-14,10;UBERON:0006222,8.00e-14,10;UBERON:0000970,1.32e-13,9;UBERON:0000019,1.32e-13,9;UBERON:0000047,1.32e-13,9;UBERON:0010312,1.32e-13,9;UBERON:0004088,1.32e-13,9;UBERON:0002104,1.32e-13,9;UBERON:0001456,1.32e-13,9;UBERON:0003072,1.32e-13,9;UBERON:0004128,1.32e-13,9;UBERON:0003071,1.32e-13,9;UBERON:0010371,1.76e-13,73;UBERON:0003080,2.60e-13,40;UBERON:0002780,1.93e-12,39;UBERON:0001890,1.93e-12,39;UBERON:0006240,1.93e-12,39;UBERON:0001017,4.03e-12,73;UBERON:0002616,7.58e-12,46;UBERON:0000007,1.03e-11,8;UBERON:0003296,1.03e-11,8;UBERON:0010133,1.03e-11,8;UBERON:0001016,1.53e-11,75;UBERON:0000955,1.93e-11,47;UBERON:0006238,1.93e-11,47;UBERON:0000073,5.28e-11,54;UBERON:0001444,1.17e-10,11;UBERON:0001049,1.17e-09,52;UBERON:0005068,1.17e-09,52;UBERON:0006241,1.17e-09,52;UBERON:0007135,1.17e-09,52;UBERON:0000020,1.47e-09,12;UBERON:0001032,1.47e-09,12;UBERON:0004456,1.47e-09,12;UBERON:0010314,1.12e-08,92;UBERON:0000033,1.24e-08,13;UBERON:0005085,1.24e-08,13;UBERON:0000369,1.75e-07,5;UBERON:0002435,1.75e-07,5;UBERON:0000204,1.75e-07,5;UBERON:0010082,1.75e-07,5;UBERON:0001954,6.76e-07,7;UBERON:0003022,6.76e-07,7;UBERON:0002421,6.76e-07,7;UBERON:0000349,6.76e-07,7;UBERON:0002600,6.76e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23260375313072,6.15121311656521,9.91592485278845,2.79972843250725,1.43752564364972,0,0,0,0,0,0,7.89034197352431,6.34789175126439,6.97214543856797,0,0,0,0,0,1.79760066311043,2.68952813725088,0.103689612308478,0.540023753326763,0,0,0,22.1708346579067,21.1818490950302,22.9804696652505,0,2.55374676170375,1.84327839907492,14.3756053625911,9.42322729104819,11.4600941522487,0.837548997004143,0,1.37518422999129,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99162557619291,16.0125210986519,15.5811396619952,0.347648640384553,1.27857728665165,7.48036960414416,4.86723789203273,0,0,0,3.36706969418358,28.106015679944,28.0480567408837,55.9993223694636,42.9508730831788,54.5652723193649,59.0604250513157,47.9752829745812,11.6416516832557,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.13195073617213,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2558258071364,22.8677589419764,24.8368672862889,18.8616590827801,21.6355085043574,19.4422011186257,14.973960874793,16.4411072521884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59468368960442,1.59609949360412,1.02440163452481,1.21553358534147,1.67690530102386,1.83843508450014,1.33348036680969,1.03017528619447,1.28367683836726,1.26348605881899,0.50695859978048,1.50901073108861,0.936415074698824,1.79270426733634,2.01024141344646,1.42888107384922,1.62238056322798,0.192909220463705,1.64834360321323,1.91358596174717,1.37147700954166,2.66213709239006,2.14592570952589,1.59881058295561,0.658765662907314,1.35383372626682,0.914639864363863,2.10455769150274,1.08643291076689,1.12228454331548,1.18635018124174,1.28055827088233,1.22769312950907,1.39443157067369,0.385813221962283,4.99621155875892,0.467863216890817,1.28922632428979,0,0,0|short_description=p1@Six3}} | ||
|EntrezGene=20473 | |||
|HGNC= | |||
|MCL_coexpression_id=492 | |||
|UniProt=Q62233 | |||
|association_with_transcript=0bp_to_ENSMUST00000162436,NM_011381,uc008dub.2_5end | |||
|description=CAGE_peak_1_at_Six3_5end | |||
|id=chr17:86020156..86020183,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.12e-07!43;CL:0000117!2.15e-07!23;CL:0000337!2.15e-07!23;CL:0000221!4.36e-07!44;CL:0000133!4.36e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.75e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!7.24e-25!49;UBERON:0000033!3.04e-20!63;UBERON:0003080!1.90e-15!40;UBERON:0002780!1.26e-14!39;UBERON:0001890!1.26e-14!39;UBERON:0006240!1.26e-14!39;UBERON:0002616!2.36e-14!49;UBERON:0002346!2.77e-14!71;UBERON:0003075!2.77e-14!71;UBERON:0007284!2.77e-14!71;UBERON:0000955!7.28e-14!50;UBERON:0006238!7.28e-14!50;UBERON:0004121!1.02e-13!102;UBERON:0000924!1.02e-13!102;UBERON:0006601!1.02e-13!102;UBERON:0001017!4.91e-13!73;UBERON:0005743!4.91e-13!73;UBERON:0000073!2.30e-12!75;UBERON:0001016!2.30e-12!75;UBERON:0001894!7.08e-12!10;UBERON:0006222!7.08e-12!10;UBERON:0000970!1.08e-11!9;UBERON:0000019!1.08e-11!9;UBERON:0000047!1.08e-11!9;UBERON:0004088!1.08e-11!9;UBERON:0002104!1.08e-11!9;UBERON:0001456!1.08e-11!9;UBERON:0003072!1.08e-11!9;UBERON:0003071!1.08e-11!9;UBERON:0004128!1.08e-11!9;UBERON:0007811!2.63e-11!86;UBERON:0001049!7.81e-11!52;UBERON:0005068!7.81e-11!52;UBERON:0006241!7.81e-11!52;UBERON:0007135!7.81e-11!52;UBERON:0000007!4.23e-10!8;UBERON:0003296!4.23e-10!8;UBERON:0010133!4.23e-10!8;UBERON:0000153!2.64e-09!94;UBERON:0001444!4.91e-09!11;UBERON:0000020!4.78e-08!12;UBERON:0001032!4.78e-08!12;UBERON:0004456!4.78e-08!12;UBERON:0001954!1.70e-07!7;UBERON:0003022!1.70e-07!7;UBERON:0002421!1.70e-07!7;UBERON:0000349!1.70e-07!7;UBERON:0002600!1.70e-07!7;UBERON:0005085!3.24e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.65e-23,49;UBERON:0002346,7.91e-17,64;UBERON:0003075,7.91e-17,64;UBERON:0007284,7.91e-17,64;UBERON:0004121,4.63e-16,95;UBERON:0000924,4.63e-16,95;UBERON:0006601,4.63e-16,95;UBERON:0001894,8.00e-14,10;UBERON:0006222,8.00e-14,10;UBERON:0000970,1.32e-13,9;UBERON:0000019,1.32e-13,9;UBERON:0000047,1.32e-13,9;UBERON:0010312,1.32e-13,9;UBERON:0004088,1.32e-13,9;UBERON:0002104,1.32e-13,9;UBERON:0001456,1.32e-13,9;UBERON:0003072,1.32e-13,9;UBERON:0004128,1.32e-13,9;UBERON:0003071,1.32e-13,9;UBERON:0010371,1.76e-13,73;UBERON:0003080,2.60e-13,40;UBERON:0002780,1.93e-12,39;UBERON:0001890,1.93e-12,39;UBERON:0006240,1.93e-12,39;UBERON:0001017,4.03e-12,73;UBERON:0002616,7.58e-12,46;UBERON:0000007,1.03e-11,8;UBERON:0003296,1.03e-11,8;UBERON:0010133,1.03e-11,8;UBERON:0001016,1.53e-11,75;UBERON:0000955,1.93e-11,47;UBERON:0006238,1.93e-11,47;UBERON:0000073,5.28e-11,54;UBERON:0001444,1.17e-10,11;UBERON:0001049,1.17e-09,52;UBERON:0005068,1.17e-09,52;UBERON:0006241,1.17e-09,52;UBERON:0007135,1.17e-09,52;UBERON:0000020,1.47e-09,12;UBERON:0001032,1.47e-09,12;UBERON:0004456,1.47e-09,12;UBERON:0010314,1.12e-08,92;UBERON:0000033,1.24e-08,13;UBERON:0005085,1.24e-08,13;UBERON:0000369,1.75e-07,5;UBERON:0002435,1.75e-07,5;UBERON:0000204,1.75e-07,5;UBERON:0010082,1.75e-07,5;UBERON:0001954,6.76e-07,7;UBERON:0003022,6.76e-07,7;UBERON:0002421,6.76e-07,7;UBERON:0000349,6.76e-07,7;UBERON:0002600,6.76e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23260375313072,6.15121311656521,9.91592485278845,2.79972843250725,1.43752564364972,0,0,0,0,0,0,7.89034197352431,6.34789175126439,6.97214543856797,0,0,0,0,0,1.79760066311043,2.68952813725088,0.103689612308478,0.540023753326763,0,0,0,22.1708346579067,21.1818490950302,22.9804696652505,0,2.55374676170375,1.84327839907492,14.3756053625911,9.42322729104819,11.4600941522487,0.837548997004143,0,1.37518422999129,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99162557619291,16.0125210986519,15.5811396619952,0.347648640384553,1.27857728665165,7.48036960414416,4.86723789203273,0,0,0,3.36706969418358,28.106015679944,28.0480567408837,55.9993223694636,42.9508730831788,54.5652723193649,59.0604250513157,47.9752829745812,11.6416516832557,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.13195073617213,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2558258071364,22.8677589419764,24.8368672862889,18.8616590827801,21.6355085043574,19.4422011186257,14.973960874793,16.4411072521884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59468368960442,1.59609949360412,1.02440163452481,1.21553358534147,1.67690530102386,1.83843508450014,1.33348036680969,1.03017528619447,1.28367683836726,1.26348605881899,0.50695859978048,1.50901073108861,0.936415074698824,1.79270426733634,2.01024141344646,1.42888107384922,1.62238056322798,0.192909220463705,1.64834360321323,1.91358596174717,1.37147700954166,2.66213709239006,2.14592570952589,1.59881058295561,0.658765662907314,1.35383372626682,0.914639864363863,2.10455769150274,1.08643291076689,1.12228454331548,1.18635018124174,1.28055827088233,1.22769312950907,1.39443157067369,0.385813221962283,4.99621155875892,0.467863216890817,1.28922632428979,0,0,0 | |||
|short_description=p1@Six3 | |||
}} |
Revision as of 15:31, 13 September 2013
Short description: | p1@Six3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Six3_5end |
Coexpression cluster: | MCL_coexpression_mm9:492 |
Association with transcript: | 0bp_to_ENSMUST00000162436, NM_011381, uc008dub.2_5end |
EntrezGene: | Six3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.75e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.