FFCP PHASE1:Mm9::chr17:86014504..86014516,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=133|UniProt=|association_with_transcript=172bp_to_ENSMUST00000162311_5end|description=CAGE_peak_2_at_ENSMUST00000162311_5end|id=chr17:86014504..86014516,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002613,3.86e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!4.49e-18!49;UBERON:0000033!2.92e-15!63;UBERON:0000970!4.67e-15!9;UBERON:0000019!4.67e-15!9;UBERON:0000047!4.67e-15!9;UBERON:0004088!4.67e-15!9;UBERON:0002104!4.67e-15!9;UBERON:0001456!4.67e-15!9;UBERON:0003072!4.67e-15!9;UBERON:0003071!4.67e-15!9;UBERON:0004128!4.67e-15!9;UBERON:0001444!5.40e-12!11;UBERON:0000007!5.80e-12!8;UBERON:0003296!5.80e-12!8;UBERON:0010133!5.80e-12!8;UBERON:0001894!5.84e-12!10;UBERON:0006222!5.84e-12!10;UBERON:0000020!7.57e-11!12;UBERON:0001032!7.57e-11!12;UBERON:0004456!7.57e-11!12;UBERON:0002346!1.65e-10!71;UBERON:0003075!1.65e-10!71;UBERON:0007284!1.65e-10!71;UBERON:0005085!7.05e-10!13;UBERON:0007811!2.19e-09!86;UBERON:0004121!1.36e-08!102;UBERON:0000924!1.36e-08!102;UBERON:0006601!1.36e-08!102;UBERON:0003080!1.48e-08!40;UBERON:0002616!2.58e-08!49;UBERON:0000955!4.60e-08!50;UBERON:0006238!4.60e-08!50;UBERON:0000153!4.88e-08!94;UBERON:0002780!9.69e-08!39;UBERON:0001890!9.69e-08!39;UBERON:0006240!9.69e-08!39|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.95e-35,9;UBERON:0000019,4.95e-35,9;UBERON:0000047,4.95e-35,9;UBERON:0010312,4.95e-35,9;UBERON:0004088,4.95e-35,9;UBERON:0002104,4.95e-35,9;UBERON:0001456,4.95e-35,9;UBERON:0003072,4.95e-35,9;UBERON:0004128,4.95e-35,9;UBERON:0003071,4.95e-35,9;UBERON:0001444,1.36e-28,11;UBERON:0000020,3.55e-26,12;UBERON:0001032,3.55e-26,12;UBERON:0004456,3.55e-26,12;UBERON:0000033,3.95e-24,13;UBERON:0005085,3.95e-24,13;UBERON:0003056,1.36e-20,49;UBERON:0002346,1.86e-15,64;UBERON:0003075,1.86e-15,64;UBERON:0007284,1.86e-15,64;UBERON:0010371,2.21e-13,73;UBERON:0000007,1.42e-12,8;UBERON:0003296,1.42e-12,8;UBERON:0010133,1.42e-12,8;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0010314,2.54e-10,92;UBERON:0001894,4.10e-10,10;UBERON:0006222,4.10e-10,10;UBERON:0007811,2.30e-08,36;UBERON:0000153,6.72e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0.191690942036473,0,0,0.510749352340751,0.153606533256243,2.1101806036831,1.55528994124096,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0,0,0.324482526135515,0,0,0,0,4.29397461776922,8.04657365517155,11.1638520479317,7.9873553452929,8.64063539221864,6.91814089538189,6.55912071918102,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42116078659489,2.8458910432206,1.50035924522115,1.24138163549592,0.535106452806212,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.114870937911227,0.476293691283074,0.347652977834566,0,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0,0.464810523557898,0.192906610981141,0.999242311751784,0,0,0,0,0|short_description=p2@ENSMUST00000162311}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=133 | |||
|UniProt= | |||
|association_with_transcript=172bp_to_ENSMUST00000162311_5end | |||
|description=CAGE_peak_2_at_ENSMUST00000162311_5end | |||
|id=chr17:86014504..86014516,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.86e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.49e-18!49;UBERON:0000033!2.92e-15!63;UBERON:0000970!4.67e-15!9;UBERON:0000019!4.67e-15!9;UBERON:0000047!4.67e-15!9;UBERON:0004088!4.67e-15!9;UBERON:0002104!4.67e-15!9;UBERON:0001456!4.67e-15!9;UBERON:0003072!4.67e-15!9;UBERON:0003071!4.67e-15!9;UBERON:0004128!4.67e-15!9;UBERON:0001444!5.40e-12!11;UBERON:0000007!5.80e-12!8;UBERON:0003296!5.80e-12!8;UBERON:0010133!5.80e-12!8;UBERON:0001894!5.84e-12!10;UBERON:0006222!5.84e-12!10;UBERON:0000020!7.57e-11!12;UBERON:0001032!7.57e-11!12;UBERON:0004456!7.57e-11!12;UBERON:0002346!1.65e-10!71;UBERON:0003075!1.65e-10!71;UBERON:0007284!1.65e-10!71;UBERON:0005085!7.05e-10!13;UBERON:0007811!2.19e-09!86;UBERON:0004121!1.36e-08!102;UBERON:0000924!1.36e-08!102;UBERON:0006601!1.36e-08!102;UBERON:0003080!1.48e-08!40;UBERON:0002616!2.58e-08!49;UBERON:0000955!4.60e-08!50;UBERON:0006238!4.60e-08!50;UBERON:0000153!4.88e-08!94;UBERON:0002780!9.69e-08!39;UBERON:0001890!9.69e-08!39;UBERON:0006240!9.69e-08!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.95e-35,9;UBERON:0000019,4.95e-35,9;UBERON:0000047,4.95e-35,9;UBERON:0010312,4.95e-35,9;UBERON:0004088,4.95e-35,9;UBERON:0002104,4.95e-35,9;UBERON:0001456,4.95e-35,9;UBERON:0003072,4.95e-35,9;UBERON:0004128,4.95e-35,9;UBERON:0003071,4.95e-35,9;UBERON:0001444,1.36e-28,11;UBERON:0000020,3.55e-26,12;UBERON:0001032,3.55e-26,12;UBERON:0004456,3.55e-26,12;UBERON:0000033,3.95e-24,13;UBERON:0005085,3.95e-24,13;UBERON:0003056,1.36e-20,49;UBERON:0002346,1.86e-15,64;UBERON:0003075,1.86e-15,64;UBERON:0007284,1.86e-15,64;UBERON:0010371,2.21e-13,73;UBERON:0000007,1.42e-12,8;UBERON:0003296,1.42e-12,8;UBERON:0010133,1.42e-12,8;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0010314,2.54e-10,92;UBERON:0001894,4.10e-10,10;UBERON:0006222,4.10e-10,10;UBERON:0007811,2.30e-08,36;UBERON:0000153,6.72e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0.191690942036473,0,0,0.510749352340751,0.153606533256243,2.1101806036831,1.55528994124096,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0,0,0.324482526135515,0,0,0,0,4.29397461776922,8.04657365517155,11.1638520479317,7.9873553452929,8.64063539221864,6.91814089538189,6.55912071918102,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42116078659489,2.8458910432206,1.50035924522115,1.24138163549592,0.535106452806212,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.114870937911227,0.476293691283074,0.347652977834566,0,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0,0.464810523557898,0.192906610981141,0.999242311751784,0,0,0,0,0 | |||
|short_description=p2@ENSMUST00000162311 | |||
}} |
Revision as of 15:31, 13 September 2013
Short description: | p2@ENSMUST00000162311 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000162311_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | 172bp_to_ENSMUST00000162311_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.86e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 4.95e-35 | 9 |
camera-type eye | 4.95e-35 | 9 |
simple eye | 4.95e-35 | 9 |
immature eye | 4.95e-35 | 9 |
ocular region | 4.95e-35 | 9 |
visual system | 4.95e-35 | 9 |
face | 4.95e-35 | 9 |
optic cup | 4.95e-35 | 9 |
optic vesicle | 4.95e-35 | 9 |
eye primordium | 4.95e-35 | 9 |
subdivision of head | 1.36e-28 | 11 |
sense organ | 3.55e-26 | 12 |
sensory system | 3.55e-26 | 12 |
entire sense organ system | 3.55e-26 | 12 |
head | 3.95e-24 | 13 |
ectodermal placode | 3.95e-24 | 13 |
pre-chordal neural plate | 1.36e-20 | 49 |
neurectoderm | 1.86e-15 | 64 |
neural plate | 1.86e-15 | 64 |
presumptive neural plate | 1.86e-15 | 64 |
ecto-epithelium | 2.21e-13 | 73 |
pituitary gland | 1.42e-12 | 8 |
gland of diencephalon | 1.42e-12 | 8 |
neuroendocrine gland | 1.42e-12 | 8 |
ectoderm-derived structure | 1.10e-11 | 95 |
ectoderm | 1.10e-11 | 95 |
presumptive ectoderm | 1.10e-11 | 95 |
structure with developmental contribution from neural crest | 2.54e-10 | 92 |
diencephalon | 4.10e-10 | 10 |
future diencephalon | 4.10e-10 | 10 |
craniocervical region | 2.30e-08 | 36 |
anterior region of body | 6.72e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.