FFCP PHASE1:Hg19::chr5:18697987..18697993,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C21|description=CAGE_peak_at_chr5:18697987..18697993,-|id=chr5:18697987..18697993,-|ontology_enrichment_celltype=CL:0002031!1.92e-22!124;CL:0000738!3.41e-22!140;CL:0002087!5.55e-22!119;CL:0000988!8.72e-21!182;CL:0002057!2.28e-20!42;CL:0000860!9.40e-19!45;CL:0000037!6.35e-18!172;CL:0000566!6.35e-18!172;CL:0002032!1.07e-17!165;CL:0000837!1.07e-17!165;CL:0000766!2.07e-17!76;CL:0000839!3.08e-17!70;CL:0000557!6.25e-17!71;CL:0002194!9.51e-16!63;CL:0000576!9.51e-16!63;CL:0000040!9.51e-16!63;CL:0000559!9.51e-16!63;CL:0002009!3.86e-15!65;CL:0000763!1.90e-11!112;CL:0000049!1.90e-11!112;CL:0000080!3.06e-11!6|ontology_enrichment_celltype_v019=CL:1000415;9.87e-10;2!CL:0000054;1.57e-09;2!CL:0000771;1.57e-09;2!CL:0000137;1.57e-09;2!CL:0000092;1.57e-09;2!CL:0000860;1.23e-07;33!CL:0002057;1.23e-07;33!CL:0000081;5.31e-07;11|ontology_enrichment_celltype_v019_2=CL:1000415,1.03e-09,2;CL:0000054,1.33e-09,2;CL:0000137,1.33e-09,2;CL:0000092,1.33e-09,2;CL:0000771,1.57e-09,2;CL:0000766,7.14e-08,72;CL:0000081,5.31e-07,11;CL:0002194,7.55e-07,59;CL:0000576,7.55e-07,59;CL:0000040,7.55e-07,59;CL:0000559,7.55e-07,59;CL:0000988,8.95e-07,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060085;1.03e-17;1!DOID:3165;1.03e-17;1!DOID:0060121;1.03e-17;1!DOID:2438;1.03e-17;1!DOID:4418;1.03e-17;1!DOID:200;1.57e-09;2!DOID:4305;1.57e-09;2|ontology_enrichment_disease_v019_2=DOID:0060085,7.37e-18,1;DOID:3165,7.37e-18,1;DOID:0060121,7.37e-18,1;DOID:2438,7.37e-18,1;DOID:4418,7.37e-18,1;DOID:200,1.33e-09,2;DOID:4305,1.33e-09,2|ontology_enrichment_uberon=UBERON:0002390!7.48e-18!102;UBERON:0003061!7.48e-18!102;UBERON:0002193!9.86e-16!112;UBERON:0002371!1.64e-14!80;UBERON:0001474!3.50e-13!86;UBERON:0004765!1.48e-10!101;UBERON:0001434!1.48e-10!101;UBERON:0002405!8.34e-10!115|ontology_enrichment_uberon_v019=UBERON:0002331;9.32e-16;10!UBERON:0000178;1.03e-10;15!UBERON:0000179;1.03e-10;15!UBERON:0000463;1.03e-10;15!UBERON:0002390;7.29e-09;32!UBERON:0000478;6.68e-07;24!UBERON:0002110;6.69e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.10e-16,10;UBERON:0000358,9.10e-16,10;UBERON:0000307,9.10e-16,10;UBERON:0000091,9.10e-16,10;UBERON:0000087,9.10e-16,10;UBERON:0007010,9.10e-16,10;UBERON:0007806,9.10e-16,10;UBERON:0008780,9.10e-16,10;UBERON:0005728,9.10e-16,10;UBERON:0000178,1.01e-10,15;UBERON:0000179,1.01e-10,15;UBERON:0000463,1.01e-10,15;UBERON:0002390,4.09e-10,98;UBERON:0003061,4.09e-10,98;UBERON:0002193,3.94e-09,108;UBERON:0000478,6.61e-07,24;UBERON:0002110,6.88e-07,3;UBERON:0006242,6.88e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,1.37898272294647,1.29096936716765,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0.870627715885752,1.13477044938228,0,0,1.0429658368404,0,0.605399502633369,0,0.949387162322653,0.211255286311942,0,0,0,0,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,6.61608583148786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4538874045861,5.31324937469962,4.9078316267564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0,0,1.39100228192093,0,0,5.05000567584662,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr5:18697987..18697993,- | |||
|id=chr5:18697987..18697993,- | |||
|ontology_enrichment_celltype=CL:0002031!1.92e-22!124;CL:0000738!3.41e-22!140;CL:0002087!5.55e-22!119;CL:0000988!8.72e-21!182;CL:0002057!2.28e-20!42;CL:0000860!9.40e-19!45;CL:0000037!6.35e-18!172;CL:0000566!6.35e-18!172;CL:0002032!1.07e-17!165;CL:0000837!1.07e-17!165;CL:0000766!2.07e-17!76;CL:0000839!3.08e-17!70;CL:0000557!6.25e-17!71;CL:0002194!9.51e-16!63;CL:0000576!9.51e-16!63;CL:0000040!9.51e-16!63;CL:0000559!9.51e-16!63;CL:0002009!3.86e-15!65;CL:0000763!1.90e-11!112;CL:0000049!1.90e-11!112;CL:0000080!3.06e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:1000415;9.87e-10;2!CL:0000054;1.57e-09;2!CL:0000771;1.57e-09;2!CL:0000137;1.57e-09;2!CL:0000092;1.57e-09;2!CL:0000860;1.23e-07;33!CL:0002057;1.23e-07;33!CL:0000081;5.31e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.03e-09,2;CL:0000054,1.33e-09,2;CL:0000137,1.33e-09,2;CL:0000092,1.33e-09,2;CL:0000771,1.57e-09,2;CL:0000766,7.14e-08,72;CL:0000081,5.31e-07,11;CL:0002194,7.55e-07,59;CL:0000576,7.55e-07,59;CL:0000040,7.55e-07,59;CL:0000559,7.55e-07,59;CL:0000988,8.95e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.03e-17;1!DOID:3165;1.03e-17;1!DOID:0060121;1.03e-17;1!DOID:2438;1.03e-17;1!DOID:4418;1.03e-17;1!DOID:200;1.57e-09;2!DOID:4305;1.57e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,7.37e-18,1;DOID:3165,7.37e-18,1;DOID:0060121,7.37e-18,1;DOID:2438,7.37e-18,1;DOID:4418,7.37e-18,1;DOID:200,1.33e-09,2;DOID:4305,1.33e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.48e-18!102;UBERON:0003061!7.48e-18!102;UBERON:0002193!9.86e-16!112;UBERON:0002371!1.64e-14!80;UBERON:0001474!3.50e-13!86;UBERON:0004765!1.48e-10!101;UBERON:0001434!1.48e-10!101;UBERON:0002405!8.34e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;9.32e-16;10!UBERON:0000178;1.03e-10;15!UBERON:0000179;1.03e-10;15!UBERON:0000463;1.03e-10;15!UBERON:0002390;7.29e-09;32!UBERON:0000478;6.68e-07;24!UBERON:0002110;6.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.10e-16,10;UBERON:0000358,9.10e-16,10;UBERON:0000307,9.10e-16,10;UBERON:0000091,9.10e-16,10;UBERON:0000087,9.10e-16,10;UBERON:0007010,9.10e-16,10;UBERON:0007806,9.10e-16,10;UBERON:0008780,9.10e-16,10;UBERON:0005728,9.10e-16,10;UBERON:0000178,1.01e-10,15;UBERON:0000179,1.01e-10,15;UBERON:0000463,1.01e-10,15;UBERON:0002390,4.09e-10,98;UBERON:0003061,4.09e-10,98;UBERON:0002193,3.94e-09,108;UBERON:0000478,6.61e-07,24;UBERON:0002110,6.88e-07,3;UBERON:0006242,6.88e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,1.37898272294647,1.29096936716765,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0.870627715885752,1.13477044938228,0,0,1.0429658368404,0,0.605399502633369,0,0.949387162322653,0.211255286311942,0,0,0,0,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,6.61608583148786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4538874045861,5.31324937469962,4.9078316267564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0,0,1.39100228192093,0,0,5.05000567584662,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,1.40363678077263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:18697987..18697993,- | |||
}} |
Revision as of 15:18, 13 September 2013
Short description: | p@chr5:18697987..18697993, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:18697987..18697993, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.03e-09 | 2 |
bone matrix secreting cell | 1.33e-09 | 2 |
osteocyte | 1.33e-09 | 2 |
osteoclast | 1.33e-09 | 2 |
eosinophil | 1.57e-09 | 2 |
myeloid leukocyte | 7.14e-08 | 72 |
blood cell | 5.31e-07 | 11 |
monopoietic cell | 7.55e-07 | 59 |
monocyte | 7.55e-07 | 59 |
monoblast | 7.55e-07 | 59 |
promonocyte | 7.55e-07 | 59 |
hematopoietic cell | 8.95e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.10e-16 | 10 |
blastocyst | 9.10e-16 | 10 |
blastula | 9.10e-16 | 10 |
bilaminar disc | 9.10e-16 | 10 |
inner cell mass | 9.10e-16 | 10 |
cleaving embryo | 9.10e-16 | 10 |
connecting stalk | 9.10e-16 | 10 |
inner cell mass derived epiblast | 9.10e-16 | 10 |
extraembryonic mesoderm | 9.10e-16 | 10 |
blood | 1.01e-10 | 15 |
haemolymphatic fluid | 1.01e-10 | 15 |
organism substance | 1.01e-10 | 15 |
hematopoietic system | 4.09e-10 | 98 |
blood island | 4.09e-10 | 98 |
hemolymphoid system | 3.94e-09 | 108 |
extraembryonic structure | 6.61e-07 | 24 |
gallbladder | 6.88e-07 | 3 |
gall bladder primordium | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 7.37e-18 | 1 |
skin benign neoplasm | 7.37e-18 | 1 |
integumentary system benign neoplasm | 7.37e-18 | 1 |
dermis tumor | 7.37e-18 | 1 |
cutaneous fibrous histiocytoma | 7.37e-18 | 1 |
giant cell tumor | 1.33e-09 | 2 |
bone giant cell tumor | 1.33e-09 | 2 |
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