FFCP PHASE1:Hg19::chr5:16742330..16742344,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4651|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7593|TSSclassifier=W|UniProt=E7EPL7,E9PEW5|association_with_transcript=0bp_to_ENST00000427430,ENST00000505695,uc011cne.1_5end|coexpression_cluster_id=C4487|description=CAGE_peak_6_at_MYO10_5end|id=chr5:16742330..16742344,-|ontology_enrichment_celltype=CL:0000047!3.54e-11!8;CL:0000540!1.68e-08!6;CL:0000031!1.68e-08!6;CL:0000404!1.68e-08!6;CL:0002139!3.48e-07!24;CL:0002322!7.70e-07!5|ontology_enrichment_celltype_v019=CL:0000540;1.45e-14;6!CL:0000404;1.45e-14;6!CL:0002322;2.53e-11;5|ontology_enrichment_celltype_v019_2=CL:0000047,2.28e-19,8;CL:0000540,2.06e-14,6;CL:0000031,2.06e-14,6;CL:0000404,2.06e-14,6;CL:0002322,2.39e-11,5|ontology_enrichment_development_v019=CL:0000031;1.45e-14;6!UBERON:0006601;6.06e-14;82!UBERON:0006241;9.63e-08;3!UBERON:0003057;9.63e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.09e-60!82;UBERON:0005743!8.18e-60!86;UBERON:0001049!1.21e-53!57;UBERON:0005068!1.21e-53!57;UBERON:0006241!1.21e-53!57;UBERON:0007135!1.21e-53!57;UBERON:0000073!2.95e-53!94;UBERON:0001016!2.95e-53!94;UBERON:0002616!4.80e-46!59;UBERON:0000955!5.92e-45!69;UBERON:0006238!5.92e-45!69;UBERON:0002780!2.12e-44!41;UBERON:0001890!2.12e-44!41;UBERON:0006240!2.12e-44!41;UBERON:0003080!5.37e-43!42;UBERON:0003075!5.98e-43!86;UBERON:0007284!5.98e-43!86;UBERON:0002346!1.91e-41!90;UBERON:0001893!8.61e-39!34;UBERON:0002020!1.86e-38!34;UBERON:0003528!1.86e-38!34;UBERON:0002791!1.38e-37!33;UBERON:0001869!1.38e-36!32;UBERON:0003056!1.35e-33!61;UBERON:0000153!2.10e-30!129;UBERON:0007811!2.10e-30!129;UBERON:0004121!2.71e-29!169;UBERON:0000924!6.96e-29!173;UBERON:0006601!6.96e-29!173;UBERON:0000033!2.03e-28!123;UBERON:0000956!5.61e-28!25;UBERON:0000203!5.61e-28!25;UBERON:0007023!1.58e-25!115;UBERON:0002619!1.89e-25!22;UBERON:0001950!3.81e-23!20;UBERON:0000025!1.32e-20!194;UBERON:0004111!4.97e-19!241;UBERON:0000477!7.63e-17!286;UBERON:0000483!2.99e-13!309;UBERON:0000119!7.22e-13!312;UBERON:0002420!5.29e-12!9;UBERON:0007245!5.29e-12!9;UBERON:0010009!5.29e-12!9;UBERON:0010011!5.29e-12!9;UBERON:0000454!5.29e-12!9;UBERON:0002308!8.08e-12!9;UBERON:0000125!8.08e-12!9;UBERON:0003076!1.33e-11!15;UBERON:0003057!1.33e-11!15;UBERON:0000468!3.96e-11!659;UBERON:0000922!2.00e-10!612;UBERON:0009663!8.50e-10!7;UBERON:0004733!1.71e-08!12;UBERON:0002028!1.71e-08!12;UBERON:0007277!1.71e-08!12;UBERON:0000200!1.89e-08!6;UBERON:0000467!2.42e-08!625;UBERON:0000480!2.87e-08!626;UBERON:0001871!3.26e-08!7;UBERON:0000064!7.83e-08!219;UBERON:0004732!1.20e-07!13;UBERON:0002050!1.37e-07!605;UBERON:0005423!1.37e-07!605;UBERON:0001872!1.47e-07!5;UBERON:0000475!1.58e-07!365;UBERON:0002021!1.75e-07!5;UBERON:0000349!2.16e-07!5;UBERON:0000923!2.95e-07!604;UBERON:0005291!2.95e-07!604;UBERON:0006598!2.95e-07!604;UBERON:0002532!2.95e-07!604;UBERON:0002298!3.31e-07!8;UBERON:0001894!5.11e-07!7;UBERON:0006222!5.11e-07!7;UBERON:0000369!8.38e-07!4;UBERON:0002435!8.38e-07!4;UBERON:0000204!8.38e-07!4;UBERON:0010082!8.38e-07!4|ontology_enrichment_uberon_v019=UBERON:0002780;1.70e-48;41!UBERON:0001890;1.70e-48;41!UBERON:0001893;3.47e-48;34!UBERON:0003528;1.52e-46;34!UBERON:0002020;1.52e-46;34!UBERON:0001869;2.65e-46;32!UBERON:0002791;3.96e-46;32!UBERON:0000073;2.69e-41;53!UBERON:0002616;2.69e-41;53!UBERON:0002619;5.85e-39;22!UBERON:0000956;3.82e-37;25!UBERON:0000203;3.82e-37;25!UBERON:0001950;9.26e-35;20!UBERON:0001017;6.24e-29;75!UBERON:0000955;9.42e-26;68!UBERON:0001016;9.04e-24;83!UBERON:0000125;1.56e-20;9!UBERON:0002308;1.56e-20;9!UBERON:0002420;5.84e-17;9!UBERON:0007245;5.84e-17;9!UBERON:0010009;5.84e-17;9!UBERON:0010011;5.84e-17;9!UBERON:0000454;5.84e-17;9!UBERON:0009663;7.75e-17;7!UBERON:0001872;1.12e-12;5!UBERON:0002021;1.22e-12;5!UBERON:0001894;3.29e-12;7!UBERON:0000922;1.10e-11;49!UBERON:0000369;3.16e-11;4!UBERON:0002435;3.16e-11;4!UBERON:0000204;3.16e-11;4!UBERON:0000200;1.61e-10;6!UBERON:0011216;4.70e-10;132!UBERON:0007023;4.91e-10;114!UBERON:0002298;3.54e-09;6!UBERON:0005383;7.07e-09;3!UBERON:0005382;7.07e-09;3!UBERON:0001871;8.27e-09;6!UBERON:0000349;1.60e-08;5!UBERON:0004733;3.32e-08;12!UBERON:0002028;3.32e-08;12!UBERON:0002240;9.63e-08;3!UBERON:0005174;9.63e-08;3!UBERON:0001137;9.63e-08;3!UBERON:0004732;1.69e-07;13!UBERON:0000988;3.72e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-85,81;UBERON:0001049,4.22e-79,56;UBERON:0005068,4.22e-79,56;UBERON:0006241,4.22e-79,56;UBERON:0007135,4.22e-79,56;UBERON:0001016,8.73e-76,89;UBERON:0000073,8.81e-73,53;UBERON:0002616,8.81e-73,53;UBERON:0002780,1.64e-67,41;UBERON:0001890,1.64e-67,41;UBERON:0003080,1.64e-67,41;UBERON:0006240,1.64e-67,41;UBERON:0000955,4.43e-62,68;UBERON:0006238,4.43e-62,68;UBERON:0001893,1.72e-56,34;UBERON:0003528,6.21e-56,34;UBERON:0002020,6.21e-56,34;UBERON:0001869,1.85e-52,32;UBERON:0002791,4.77e-52,32;UBERON:0003075,3.73e-50,82;UBERON:0007284,3.73e-50,82;UBERON:0002346,3.05e-4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4651 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7593 | |||
|TSSclassifier=W | |||
|UniProt=E7EPL7,E9PEW5 | |||
|association_with_transcript=0bp_to_ENST00000427430,ENST00000505695,uc011cne.1_5end | |||
|coexpression_cluster_id=C4487 | |||
|description=CAGE_peak_6_at_MYO10_5end | |||
|id=chr5:16742330..16742344,- | |||
|ontology_enrichment_celltype=CL:0000047!3.54e-11!8;CL:0000540!1.68e-08!6;CL:0000031!1.68e-08!6;CL:0000404!1.68e-08!6;CL:0002139!3.48e-07!24;CL:0002322!7.70e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.45e-14;6!CL:0000404;1.45e-14;6!CL:0002322;2.53e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.28e-19,8;CL:0000540,2.06e-14,6;CL:0000031,2.06e-14,6;CL:0000404,2.06e-14,6;CL:0002322,2.39e-11,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.45e-14;6!UBERON:0006601;6.06e-14;82!UBERON:0006241;9.63e-08;3!UBERON:0003057;9.63e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@MYO10 | |||
}} |
Revision as of 14:40, 13 September 2013
Short description: | p6@MYO10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_MYO10_5end |
Coexpression cluster: | C4487_Neural_testicular_hippocampus_amygdala_maxillary_parietal_caudate |
Association with transcript: | 0bp_to_ENST00000427430, ENST00000505695, uc011cne.1_5end |
EntrezGene: | MYO10 |
HGNC: | 7593 |
UniProt: | E7EPL7E9PEW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.28e-19 | 8 |
neuron | 2.06e-14 | 6 |
neuroblast | 2.06e-14 | 6 |
electrically signaling cell | 2.06e-14 | 6 |
embryonic stem cell | 2.39e-11 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.