FFCP PHASE1:Mm9::chr17:34229300..34229311,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15001|HGNC=|MCL_coexpression_id=18|UniProt=B2RST7,Q9QWV1|association_with_transcript=-12bp_to_NM_008206,uc008cbg.2,uc012aps.1_5end|description=CAGE_peak_2_at_H2-Oa_5end|id=chr17:34229300..34229311,+|ontology_enrichment_celltype=CL:0000988!4.51e-11!32;CL:0002032!4.51e-11!32;CL:0000037!4.51e-11!32;CL:0000566!4.51e-11!32;CL:0000837!4.51e-11!32;CL:0002031!5.72e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,3.28e-12,32;CL:0002032,3.28e-12,32;CL:0000037,3.28e-12,32;CL:0000837,3.28e-12,32;CL:0002031,1.73e-08,25;CL:0002320,1.51e-07,46;CL:0000134,1.51e-07,46;CL:0000553,2.08e-07,6;CL:0000556,2.08e-07,6;CL:0000049,4.60e-07,19;CL:0000838,5.09e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.56e-19!48;UBERON:0002390!9.96e-17!45;UBERON:0003061!9.96e-17!45;UBERON:0004177!1.80e-13!29;UBERON:0002405!2.18e-13!70;UBERON:0003408!1.34e-09!24;UBERON:0002370!6.04e-09!23;UBERON:0000974!6.04e-09!23;UBERON:0004807!6.04e-09!23;UBERON:0005058!6.04e-09!23;UBERON:0003351!6.04e-09!23;UBERON:0009113!6.04e-09!23;UBERON:0003295!6.04e-09!23;UBERON:0009722!6.04e-09!23;UBERON:0005562!6.04e-09!23;UBERON:0007690!6.04e-09!23;UBERON:0006562!2.54e-08!24;UBERON:0001557!2.54e-08!24;UBERON:0001042!2.54e-08!24;UBERON:0008814!2.54e-08!24;UBERON:0009145!2.54e-08!24;UBERON:0005057!7.36e-08!51;UBERON:0003081!1.08e-07!88;UBERON:0000072!9.31e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.41e-24,48;UBERON:0002405,4.41e-24,48;UBERON:0002390,2.62e-19,45;UBERON:0003061,2.62e-19,45;UBERON:0004177,1.77e-15,29;UBERON:0005057,1.77e-15,29;UBERON:0000077,3.09e-12,35;UBERON:0003408,1.27e-11,24;UBERON:0002370,2.57e-10,23;UBERON:0000974,2.57e-10,23;UBERON:0004807,2.57e-10,23;UBERON:0005058,2.57e-10,23;UBERON:0003351,2.57e-10,23;UBERON:0009113,2.57e-10,23;UBERON:0003295,2.57e-10,23;UBERON:0009722,2.57e-10,23;UBERON:0005562,2.57e-10,23;UBERON:0007690,2.57e-10,23;UBERON:0006562,8.56e-10,24;UBERON:0001557,8.56e-10,24;UBERON:0001042,8.56e-10,24;UBERON:0008814,8.56e-10,24;UBERON:0009145,8.56e-10,24;UBERON:0003081,1.68e-09,87;UBERON:0000072,1.84e-08,27;UBERON:0002465,8.55e-08,3;UBERON:0002384,1.51e-07,46;UBERON:0002106,5.40e-07,6;UBERON:0004457,5.40e-07,6;UBERON:0000042,5.40e-07,6;UBERON:0004854,5.40e-07,6;UBERON:0009034,5.40e-07,6;UBERON:0002095,5.40e-07,6;UBERON:0004782,5.40e-07,6;UBERON:0003281,5.40e-07,6;UBERON:0009664,5.40e-07,6;UBERON:0002296,5.40e-07,6;UBERON:0005602,5.40e-07,6;UBERON:0001179,5.40e-07,6;UBERON:0006293,5.40e-07,6;UBERON:0007811,6.18e-07,36|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.422366166455,0,0,0,0.856003649656029,0.699363219351979,0.666219523631325,2.42970320867791,0.699561878128147,19.0854610041734,17.6877619351403,14.8536378129311,0.340173160604279,4.86525660884338,2.61199789138935,1.59992422793407,1.83527424853736,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1071301815427,2.17608642603403,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,5.69663344023778,0,0,0,0,0,0.23517741427141,0,0,0,0,0,1.10420759230197,1.45462575940567,0,0,0,0,1.67741174308288,0.599902730993408,1.77898317902291,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.622034853050465,0,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,2.27330799516474,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0.292399974850665,0,0.268412837520744,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0.472905432318573,0,0.318909537314974,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,3.07567585436135,0.619160603889667,0.925972636848558,1.69531611304222,4.51090951479383,5.94823250336959,3.0596117398894,3.07893195112048,3.04039942369732,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.632022241256357,0.810900861160657,1.23253148597793,1.29920822977795,1.61124026100733,0.79472541912506,2.88469078847925,1.32920574457119,2.72609414859999,2.66723823292499,3.42809029465258,3.31356794515158,2.50150788264857,3.62318396762864,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p2@H2-Oa}} | ||
|EntrezGene=15001 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=B2RST7,Q9QWV1 | |||
|association_with_transcript=-12bp_to_NM_008206,uc008cbg.2,uc012aps.1_5end | |||
|description=CAGE_peak_2_at_H2-Oa_5end | |||
|id=chr17:34229300..34229311,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.51e-11!32;CL:0002032!4.51e-11!32;CL:0000037!4.51e-11!32;CL:0000566!4.51e-11!32;CL:0000837!4.51e-11!32;CL:0002031!5.72e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.28e-12,32;CL:0002032,3.28e-12,32;CL:0000037,3.28e-12,32;CL:0000837,3.28e-12,32;CL:0002031,1.73e-08,25;CL:0002320,1.51e-07,46;CL:0000134,1.51e-07,46;CL:0000553,2.08e-07,6;CL:0000556,2.08e-07,6;CL:0000049,4.60e-07,19;CL:0000838,5.09e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.56e-19!48;UBERON:0002390!9.96e-17!45;UBERON:0003061!9.96e-17!45;UBERON:0004177!1.80e-13!29;UBERON:0002405!2.18e-13!70;UBERON:0003408!1.34e-09!24;UBERON:0002370!6.04e-09!23;UBERON:0000974!6.04e-09!23;UBERON:0004807!6.04e-09!23;UBERON:0005058!6.04e-09!23;UBERON:0003351!6.04e-09!23;UBERON:0009113!6.04e-09!23;UBERON:0003295!6.04e-09!23;UBERON:0009722!6.04e-09!23;UBERON:0005562!6.04e-09!23;UBERON:0007690!6.04e-09!23;UBERON:0006562!2.54e-08!24;UBERON:0001557!2.54e-08!24;UBERON:0001042!2.54e-08!24;UBERON:0008814!2.54e-08!24;UBERON:0009145!2.54e-08!24;UBERON:0005057!7.36e-08!51;UBERON:0003081!1.08e-07!88;UBERON:0000072!9.31e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.41e-24,48;UBERON:0002405,4.41e-24,48;UBERON:0002390,2.62e-19,45;UBERON:0003061,2.62e-19,45;UBERON:0004177,1.77e-15,29;UBERON:0005057,1.77e-15,29;UBERON:0000077,3.09e-12,35;UBERON:0003408,1.27e-11,24;UBERON:0002370,2.57e-10,23;UBERON:0000974,2.57e-10,23;UBERON:0004807,2.57e-10,23;UBERON:0005058,2.57e-10,23;UBERON:0003351,2.57e-10,23;UBERON:0009113,2.57e-10,23;UBERON:0003295,2.57e-10,23;UBERON:0009722,2.57e-10,23;UBERON:0005562,2.57e-10,23;UBERON:0007690,2.57e-10,23;UBERON:0006562,8.56e-10,24;UBERON:0001557,8.56e-10,24;UBERON:0001042,8.56e-10,24;UBERON:0008814,8.56e-10,24;UBERON:0009145,8.56e-10,24;UBERON:0003081,1.68e-09,87;UBERON:0000072,1.84e-08,27;UBERON:0002465,8.55e-08,3;UBERON:0002384,1.51e-07,46;UBERON:0002106,5.40e-07,6;UBERON:0004457,5.40e-07,6;UBERON:0000042,5.40e-07,6;UBERON:0004854,5.40e-07,6;UBERON:0009034,5.40e-07,6;UBERON:0002095,5.40e-07,6;UBERON:0004782,5.40e-07,6;UBERON:0003281,5.40e-07,6;UBERON:0009664,5.40e-07,6;UBERON:0002296,5.40e-07,6;UBERON:0005602,5.40e-07,6;UBERON:0001179,5.40e-07,6;UBERON:0006293,5.40e-07,6;UBERON:0007811,6.18e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.422366166455,0,0,0,0.856003649656029,0.699363219351979,0.666219523631325,2.42970320867791,0.699561878128147,19.0854610041734,17.6877619351403,14.8536378129311,0.340173160604279,4.86525660884338,2.61199789138935,1.59992422793407,1.83527424853736,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1071301815427,2.17608642603403,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,5.69663344023778,0,0,0,0,0,0.23517741427141,0,0,0,0,0,1.10420759230197,1.45462575940567,0,0,0,0,1.67741174308288,0.599902730993408,1.77898317902291,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.622034853050465,0,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,2.27330799516474,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0.292399974850665,0,0.268412837520744,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0.472905432318573,0,0.318909537314974,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,3.07567585436135,0.619160603889667,0.925972636848558,1.69531611304222,4.51090951479383,5.94823250336959,3.0596117398894,3.07893195112048,3.04039942369732,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.632022241256357,0.810900861160657,1.23253148597793,1.29920822977795,1.61124026100733,0.79472541912506,2.88469078847925,1.32920574457119,2.72609414859999,2.66723823292499,3.42809029465258,3.31356794515158,2.50150788264857,3.62318396762864,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p2@H2-Oa | |||
}} |
Revision as of 14:11, 13 September 2013
Short description: | p2@H2-Oa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_H2-Oa_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -12bp_to_NM_008206, uc008cbg.2, uc012aps.1_5end |
EntrezGene: | H2-Oa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.28e-12 | 32 |
hematopoietic oligopotent progenitor cell | 3.28e-12 | 32 |
hematopoietic stem cell | 3.28e-12 | 32 |
hematopoietic multipotent progenitor cell | 3.28e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 1.73e-08 | 25 |
connective tissue cell | 1.51e-07 | 46 |
mesenchymal cell | 1.51e-07 | 46 |
megakaryocyte progenitor cell | 2.08e-07 | 6 |
megakaryocyte | 2.08e-07 | 6 |
common myeloid progenitor | 4.60e-07 | 19 |
lymphoid lineage restricted progenitor cell | 5.09e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.