FFCP PHASE1:Mm9::chr16:91545918..91545939,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=33|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:91545918..91545939,+|id=chr16:91545918..91545939,+|ontology_enrichment_celltype=CL:0000988!6.61e-12!32;CL:0002032!6.61e-12!32;CL:0000037!6.61e-12!32;CL:0000566!6.61e-12!32;CL:0000837!6.61e-12!32;CL:0002031!1.07e-11!25;CL:0000838!4.06e-09!12;CL:0000084!2.34e-08!11;CL:0000827!2.34e-08!11;CL:0000542!5.25e-08!13;CL:0000051!5.25e-08!13;CL:0000791!1.49e-07!9;CL:0000789!1.49e-07!9;CL:0002420!1.49e-07!9;CL:0002419!1.49e-07!9;CL:0000790!1.49e-07!9;CL:0002320!1.96e-07!46;CL:0000134!1.96e-07!46;CL:0000738!2.46e-07!17;CL:0002087!2.46e-07!17|ontology_enrichment_celltype_v019_2=CL:0002031,3.28e-15,25;CL:0000988,2.06e-12,32;CL:0002032,2.06e-12,32;CL:0000037,2.06e-12,32;CL:0000837,2.06e-12,32;CL:0000838,7.69e-12,12;CL:0000738,2.65e-11,17;CL:0002087,2.65e-11,17;CL:0000542,8.97e-11,13;CL:0000051,8.97e-11,13;CL:0002320,1.35e-10,46;CL:0000134,1.35e-10,46;CL:0000791,2.48e-10,9;CL:0000789,2.48e-10,9;CL:0002420,2.48e-10,9;CL:0002419,2.48e-10,9;CL:0000790,2.48e-10,9;CL:0000084,2.87e-10,11;CL:0000827,2.87e-10,11;CL:0000624,1.37e-08,8;CL:0000219,2.68e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.13e-21!48;UBERON:0002390!1.18e-19!45;UBERON:0003061!1.18e-19!45;UBERON:0002405!3.43e-15!70;UBERON:0004177!6.85e-15!29;UBERON:0003408!4.79e-12!24;UBERON:0002370!1.15e-11!23;UBERON:0000974!1.15e-11!23;UBERON:0004807!1.15e-11!23;UBERON:0005058!1.15e-11!23;UBERON:0003351!1.15e-11!23;UBERON:0009113!1.15e-11!23;UBERON:0003295!1.15e-11!23;UBERON:0009722!1.15e-11!23;UBERON:0005562!1.15e-11!23;UBERON:0007690!1.15e-11!23;UBERON:0006562!8.69e-11!24;UBERON:0001557!8.69e-11!24;UBERON:0001042!8.69e-11!24;UBERON:0008814!8.69e-11!24;UBERON:0009145!8.69e-11!24;UBERON:0001004!2.24e-10!42;UBERON:0003081!3.11e-10!88;UBERON:0000065!5.30e-10!41;UBERON:0005057!5.68e-09!51;UBERON:0000072!1.37e-08!27;UBERON:0002384!1.96e-07!46;UBERON:0000077!1.98e-07!97;UBERON:0001041!2.20e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.58e-34,45;UBERON:0003061,3.58e-34,45;UBERON:0002193,5.61e-34,48;UBERON:0002405,5.61e-34,48;UBERON:0004177,1.25e-26,29;UBERON:0005057,1.25e-26,29;UBERON:0002370,3.23e-21,23;UBERON:0000974,3.23e-21,23;UBERON:0004807,3.23e-21,23;UBERON:0005058,3.23e-21,23;UBERON:0003351,3.23e-21,23;UBERON:0009113,3.23e-21,23;UBERON:0003295,3.23e-21,23;UBERON:0009722,3.23e-21,23;UBERON:0005562,3.23e-21,23;UBERON:0007690,3.23e-21,23;UBERON:0000077,5.32e-21,35;UBERON:0006562,3.94e-20,24;UBERON:0003408,3.94e-20,24;UBERON:0001557,3.94e-20,24;UBERON:0001042,3.94e-20,24;UBERON:0008814,3.94e-20,24;UBERON:0009145,3.94e-20,24;UBERON:0003081,1.99e-18,87;UBERON:0000072,2.33e-17,27;UBERON:0000926,7.56e-14,120;UBERON:0004120,7.56e-14,120;UBERON:0006603,7.56e-14,120;UBERON:0007811,7.55e-12,36;UBERON:0000065,4.46e-11,41;UBERON:0001004,1.06e-10,42;UBERON:0002384,1.35e-10,46;UBERON:0001474,6.47e-10,22;UBERON:0004765,6.47e-10,22;UBERON:0001434,6.47e-10,22;UBERON:0002204,9.03e-10,32;UBERON:0000153,3.46e-09,43;UBERON:0002371,1.95e-08,16;UBERON:0000490,1.21e-07,66;UBERON:0001041,2.20e-07,80;UBERON:0003929,4.78e-07,55|phase1_expression=0,0,0,0,0.500895729946347,0,0,3.48632973292256,10.559154161375,7.95819389494778,0.513653904676515,0.957265907944037,14.8944635040149,8.39235863222375,0.999329285446988,2.02475267389826,0.699561878128147,4.41647031501533,5.48457734422955,2.97072756258621,0.255129870453209,0.595745707205312,1.30599894569468,0.639969691173627,0.45881856213434,0,0,0.215471232685889,0,0,0.443461021310609,0.635030673459631,1.84519436275371,0,0,0,0,6.69650609179052,2.3440060335714,5.23523743973798,6.47054636834116,2.73218193983378,5.82612423637384,0,0,0.183546752161682,0,0,0,0,0,0,10.5703041816374,36.2681071005672,17.8129713545506,0,0,0,0,0,0,0,0,1.7997994345628,1.97773272513395,1.4209602298922,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,9.58070169494535,0.148442139064825,0,0,0,0.452167921657868,0,0,0,0.289198713839823,3.5384422077995,0.161766849947409,1.54589062922275,2.90925151881133,0,0,0,0,0.359445373517761,0.599902730993408,0.762421362438388,0.149790639404823,0,0,0.347648640384553,0,0,0.162241263067758,0,1.8661045591514,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,1.40442637462647,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0.72353147925725,1.01850340712568,0.575392274901621,0.972811360650212,0.549122826376163,0,0.372140947668503,0.624075346229121,0,0,0,0.739012760666419,0,0,0.509235257325564,0,0.837531287209079,0,0.195133647857799,0.472905432318573,0.664394068946325,0.637819074629948,0.81931657357869,1.55416483679306,0.723245292907558,0,2.17562273527484,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.42366414172764,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,0.18542530201051,1.02522528478712,0.412773735926445,2.03713980106683,1.69531611304222,1.91371918809435,2.74533807847827,0.169978429993855,0.559805809294632,0.829199842826543,0,0,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,12.0084225838708,0.202725215290164,1.1298205288131,1.55904987573354,4.65469408735452,8.14593554603186,13.8224766947964,11.519783119617,14.7411016924296,16.15584301086,16.434668177305,14.5212242302231,15.3938946624527,19.6353195665036,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.548783918618318,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0.818462086339379,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,1.85494268496337|short_description=p@chr16:91545918..91545939,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:91545918..91545939,+ | |||
|id=chr16:91545918..91545939,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.61e-12!32;CL:0002032!6.61e-12!32;CL:0000037!6.61e-12!32;CL:0000566!6.61e-12!32;CL:0000837!6.61e-12!32;CL:0002031!1.07e-11!25;CL:0000838!4.06e-09!12;CL:0000084!2.34e-08!11;CL:0000827!2.34e-08!11;CL:0000542!5.25e-08!13;CL:0000051!5.25e-08!13;CL:0000791!1.49e-07!9;CL:0000789!1.49e-07!9;CL:0002420!1.49e-07!9;CL:0002419!1.49e-07!9;CL:0000790!1.49e-07!9;CL:0002320!1.96e-07!46;CL:0000134!1.96e-07!46;CL:0000738!2.46e-07!17;CL:0002087!2.46e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.28e-15,25;CL:0000988,2.06e-12,32;CL:0002032,2.06e-12,32;CL:0000037,2.06e-12,32;CL:0000837,2.06e-12,32;CL:0000838,7.69e-12,12;CL:0000738,2.65e-11,17;CL:0002087,2.65e-11,17;CL:0000542,8.97e-11,13;CL:0000051,8.97e-11,13;CL:0002320,1.35e-10,46;CL:0000134,1.35e-10,46;CL:0000791,2.48e-10,9;CL:0000789,2.48e-10,9;CL:0002420,2.48e-10,9;CL:0002419,2.48e-10,9;CL:0000790,2.48e-10,9;CL:0000084,2.87e-10,11;CL:0000827,2.87e-10,11;CL:0000624,1.37e-08,8;CL:0000219,2.68e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.13e-21!48;UBERON:0002390!1.18e-19!45;UBERON:0003061!1.18e-19!45;UBERON:0002405!3.43e-15!70;UBERON:0004177!6.85e-15!29;UBERON:0003408!4.79e-12!24;UBERON:0002370!1.15e-11!23;UBERON:0000974!1.15e-11!23;UBERON:0004807!1.15e-11!23;UBERON:0005058!1.15e-11!23;UBERON:0003351!1.15e-11!23;UBERON:0009113!1.15e-11!23;UBERON:0003295!1.15e-11!23;UBERON:0009722!1.15e-11!23;UBERON:0005562!1.15e-11!23;UBERON:0007690!1.15e-11!23;UBERON:0006562!8.69e-11!24;UBERON:0001557!8.69e-11!24;UBERON:0001042!8.69e-11!24;UBERON:0008814!8.69e-11!24;UBERON:0009145!8.69e-11!24;UBERON:0001004!2.24e-10!42;UBERON:0003081!3.11e-10!88;UBERON:0000065!5.30e-10!41;UBERON:0005057!5.68e-09!51;UBERON:0000072!1.37e-08!27;UBERON:0002384!1.96e-07!46;UBERON:0000077!1.98e-07!97;UBERON:0001041!2.20e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.58e-34,45;UBERON:0003061,3.58e-34,45;UBERON:0002193,5.61e-34,48;UBERON:0002405,5.61e-34,48;UBERON:0004177,1.25e-26,29;UBERON:0005057,1.25e-26,29;UBERON:0002370,3.23e-21,23;UBERON:0000974,3.23e-21,23;UBERON:0004807,3.23e-21,23;UBERON:0005058,3.23e-21,23;UBERON:0003351,3.23e-21,23;UBERON:0009113,3.23e-21,23;UBERON:0003295,3.23e-21,23;UBERON:0009722,3.23e-21,23;UBERON:0005562,3.23e-21,23;UBERON:0007690,3.23e-21,23;UBERON:0000077,5.32e-21,35;UBERON:0006562,3.94e-20,24;UBERON:0003408,3.94e-20,24;UBERON:0001557,3.94e-20,24;UBERON:0001042,3.94e-20,24;UBERON:0008814,3.94e-20,24;UBERON:0009145,3.94e-20,24;UBERON:0003081,1.99e-18,87;UBERON:0000072,2.33e-17,27;UBERON:0000926,7.56e-14,120;UBERON:0004120,7.56e-14,120;UBERON:0006603,7.56e-14,120;UBERON:0007811,7.55e-12,36;UBERON:0000065,4.46e-11,41;UBERON:0001004,1.06e-10,42;UBERON:0002384,1.35e-10,46;UBERON:0001474,6.47e-10,22;UBERON:0004765,6.47e-10,22;UBERON:0001434,6.47e-10,22;UBERON:0002204,9.03e-10,32;UBERON:0000153,3.46e-09,43;UBERON:0002371,1.95e-08,16;UBERON:0000490,1.21e-07,66;UBERON:0001041,2.20e-07,80;UBERON:0003929,4.78e-07,55 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,3.48632973292256,10.559154161375,7.95819389494778,0.513653904676515,0.957265907944037,14.8944635040149,8.39235863222375,0.999329285446988,2.02475267389826,0.699561878128147,4.41647031501533,5.48457734422955,2.97072756258621,0.255129870453209,0.595745707205312,1.30599894569468,0.639969691173627,0.45881856213434,0,0,0.215471232685889,0,0,0.443461021310609,0.635030673459631,1.84519436275371,0,0,0,0,6.69650609179052,2.3440060335714,5.23523743973798,6.47054636834116,2.73218193983378,5.82612423637384,0,0,0.183546752161682,0,0,0,0,0,0,10.5703041816374,36.2681071005672,17.8129713545506,0,0,0,0,0,0,0,0,1.7997994345628,1.97773272513395,1.4209602298922,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,9.58070169494535,0.148442139064825,0,0,0,0.452167921657868,0,0,0,0.289198713839823,3.5384422077995,0.161766849947409,1.54589062922275,2.90925151881133,0,0,0,0,0.359445373517761,0.599902730993408,0.762421362438388,0.149790639404823,0,0,0.347648640384553,0,0,0.162241263067758,0,1.8661045591514,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,1.40442637462647,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0.72353147925725,1.01850340712568,0.575392274901621,0.972811360650212,0.549122826376163,0,0.372140947668503,0.624075346229121,0,0,0,0.739012760666419,0,0,0.509235257325564,0,0.837531287209079,0,0.195133647857799,0.472905432318573,0.664394068946325,0.637819074629948,0.81931657357869,1.55416483679306,0.723245292907558,0,2.17562273527484,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.42366414172764,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,0.18542530201051,1.02522528478712,0.412773735926445,2.03713980106683,1.69531611304222,1.91371918809435,2.74533807847827,0.169978429993855,0.559805809294632,0.829199842826543,0,0,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,12.0084225838708,0.202725215290164,1.1298205288131,1.55904987573354,4.65469408735452,8.14593554603186,13.8224766947964,11.519783119617,14.7411016924296,16.15584301086,16.434668177305,14.5212242302231,15.3938946624527,19.6353195665036,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.548783918618318,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0.818462086339379,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,1.85494268496337 | |||
|short_description=p@chr16:91545918..91545939,+ | |||
}} |
Revision as of 13:18, 13 September 2013
Short description: | p@chr16:91545918..91545939, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:91545918..91545939, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.28e-15 | 25 |
hematopoietic cell | 2.06e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.06e-12 | 32 |
hematopoietic stem cell | 2.06e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.06e-12 | 32 |
lymphoid lineage restricted progenitor cell | 7.69e-12 | 12 |
leukocyte | 2.65e-11 | 17 |
nongranular leukocyte | 2.65e-11 | 17 |
lymphocyte | 8.97e-11 | 13 |
common lymphoid progenitor | 8.97e-11 | 13 |
connective tissue cell | 1.35e-10 | 46 |
mesenchymal cell | 1.35e-10 | 46 |
mature alpha-beta T cell | 2.48e-10 | 9 |
alpha-beta T cell | 2.48e-10 | 9 |
immature T cell | 2.48e-10 | 9 |
mature T cell | 2.48e-10 | 9 |
immature alpha-beta T cell | 2.48e-10 | 9 |
T cell | 2.87e-10 | 11 |
pro-T cell | 2.87e-10 | 11 |
CD4-positive, alpha-beta T cell | 1.37e-08 | 8 |
motile cell | 2.68e-08 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.