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FFCP PHASE1:Mm9::chr16:8637805..8637869,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=54128|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=0bp_to_ENSMUST00000130885,ENSMUST00000143174_5end|description=CAGE_peak_1_at_Pmm2_5end|id=chr16:8637805..8637869,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.63e-23!130;UBERON:0000925!5.63e-23!130;UBERON:0006595!5.63e-23!130;UBERON:0001007!1.25e-22!128;UBERON:0001555!1.25e-22!128;UBERON:0007026!1.25e-22!128;UBERON:0004921!2.33e-21!126;UBERON:0004185!2.33e-21!126;UBERON:0005409!2.66e-16!59;UBERON:0000160!1.22e-13!43;UBERON:0000344!5.32e-10!15;UBERON:0004923!1.39e-09!24;UBERON:0001242!8.31e-09!13;UBERON:0000060!8.31e-09!13;UBERON:0001262!8.31e-09!13;UBERON:0004786!8.31e-09!13;UBERON:0003929!1.67e-08!55;UBERON:0000077!4.41e-08!97;UBERON:0005911!6.60e-08!69;UBERON:0001041!2.70e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.08e-22,118;UBERON:0000925,1.08e-22,118;UBERON:0006595,1.08e-22,118;UBERON:0001007,2.24e-22,116;UBERON:0001555,2.24e-22,116;UBERON:0007026,2.24e-22,116;UBERON:0004921,4.12e-21,114;UBERON:0005409,1.28e-17,47;UBERON:0000160,1.08e-15,31;UBERON:0000344,5.32e-10,15;UBERON:0004923,1.39e-09,24;UBERON:0001242,8.31e-09,13;UBERON:0001262,8.31e-09,13;UBERON:0004786,8.31e-09,13;UBERON:0003929,1.67e-08,55;UBERON:0005911,6.60e-08,69;UBERON:0001041,4.72e-07,80|phase1_expression=18.5772662641561,136.100408979351,106.014822777762,78.338230728469,86.6549612807181,96.8663398931604,99.2853722530984,34.0885573885761,22.9485617107217,20.3636137900134,41.6059662787977,38.9288135897242,47.422602190944,46.6824948917446,23.6507930889121,32.3960427823721,31.4802845157666,33.2812584452941,38.5291558432126,33.5267824920444,29.4249783922701,27.702175385047,24.5527801790599,101.275203628226,100.940083669555,103.361753540704,110.705833012882,143.503840968802,168.170726218891,127.275215528765,151.885399798884,21.5910428976275,18.4519436275371,0,49.1047753577167,59.1795337476233,46.7547825840825,32.2269355667419,46.880120671428,42.4054232618777,25.8821854733646,19.1252735788365,26.7030694167134,16.7442767907518,19.9712554502444,17.0698479510364,8.60630478782843,7.84890562969608,16.9158360705543,8.94377535741704,9.09911740564856,4.31257693094915,28.019695211642,23.211588544363,31.2567233202492,20.8380143189117,13.7536051170603,19.5955395065428,13.1505699558739,14.2827564403449,11.4089652631112,10.165335962074,13.3394219416671,19.7977937801908,15.8218618010716,12.0781619540837,9.28760342607055,9.22123932771731,16.4866483570479,13.6355997715008,14.7227472945967,11.4260393761521,13.4729809980484,14.3314235081496,17.827257609392,12.8690630125403,12.1127469099328,8.42736431362239,9.36999852863085,18.0684214190366,16.1933129176265,13.5437476344758,11.1673199600552,12.9435400307286,11.3070703354839,10.606629077052,13.0981946335175,11.5567656411686,46.7230612865746,27.2057616384428,29.5661778475711,47.3233132339763,22.4390540123558,37.7792234146472,42.2354671340985,38.9783391774682,34.1279940920157,39.0285438703752,28.8362465109184,28.9738451098479,16.9012103732017,25.6652954828636,7.64415719119937,14.2213340630666,20.3501578550541,26.8561457403604,26.7927955857835,57.206123739249,56.9663344023778,22.4147629987885,18.7364152907427,16.7456013071678,15.912469310668,19.2924979907357,29.1619993696548,26.2643175879022,34.360100515078,42.6568102913739,17.6922110389975,23.6179600923217,21.6424688091186,26.6681389224372,70.8288692628864,17.8596286177044,27.2280718857492,99.372794476142,27.5574786363617,22.1964010467561,28.8449415455857,12.1330417917906,10.980014467647,17.9685723521396,14.4274185759589,19.4343747571051,11.0127663616567,16.3863675698435,20.5715514977639,27.3695335342205,31.3376220457757,36.6168829242465,17.1758984710769,14.4838325793088,13.5046597354012,17.6324636867787,24.493139694478,25.8789714975397,21.1765897504987,25.8703370739016,17.4610074275602,19.0997140969497,20.2343792788541,18.1932457914887,18.9072129473407,30.2979384874285,20.7839957772023,14.3304672109315,22.4708219940235,22.6466158260949,31.2579849335152,18.2270679831242,19.7001890384121,19.6267646992506,17.7558551688908,20.6602443334774,18.6663206593728,22.5557926407896,18.7791380979733,30.4757543578312,24.1902979372816,29.8784784623953,28.2119457219578,25.8773977742838,33.1520674089486,27.5123158458762,13.6688466566683,16.8763564302026,124.898299967876,94.4088522988853,18.9826542976358,19.9723537799977,30.9281907173024,47.5973118111088,61.1539620573393,70.1932560355343,97.2784576166249,91.078521962378,90.7320103768973,83.163805313201,75.8410298893377,124.037078394283,131.411934323814,140.792880190838,17.6391147886366,18.965253093215,15.7790829942313,18.3286195060783,21.3347735884388,30.2986741926176,32.3771070076197,35.7216558110637,33.911725213737,35.7851775373221,45.6537045714209,20.1882577916474,20.4421354917731,27.2083155985673,21.9088931099583,21.2235900582127,25.9718368817048,21.5772103088108,46.3706748576601,50.519300026607,6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|EntrezGene=54128
|HGNC=
|MCL_coexpression_id=12
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000130885,ENSMUST00000143174_5end
|description=CAGE_peak_1_at_Pmm2_5end
|id=chr16:8637805..8637869,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.08e-22,118;UBERON:0000925,1.08e-22,118;UBERON:0006595,1.08e-22,118;UBERON:0001007,2.24e-22,116;UBERON:0001555,2.24e-22,116;UBERON:0007026,2.24e-22,116;UBERON:0004921,4.12e-21,114;UBERON:0005409,1.28e-17,47;UBERON:0000160,1.08e-15,31;UBERON:0000344,5.32e-10,15;UBERON:0004923,1.39e-09,24;UBERON:0001242,8.31e-09,13;UBERON:0001262,8.31e-09,13;UBERON:0004786,8.31e-09,13;UBERON:0003929,1.67e-08,55;UBERON:0005911,6.60e-08,69;UBERON:0001041,4.72e-07,80
|phase1_expression=18.5772662641561,136.100408979351,106.014822777762,78.338230728469,86.6549612807181,96.8663398931604,99.2853722530984,34.0885573885761,22.9485617107217,20.3636137900134,41.6059662787977,38.9288135897242,47.422602190944,46.6824948917446,23.6507930889121,32.3960427823721,31.4802845157666,33.2812584452941,38.5291558432126,33.5267824920444,29.4249783922701,27.702175385047,24.5527801790599,101.275203628226,100.940083669555,103.361753540704,110.705833012882,143.503840968802,168.170726218891,127.275215528765,151.885399798884,21.5910428976275,18.4519436275371,0,49.1047753577167,59.1795337476233,46.7547825840825,32.2269355667419,46.880120671428,42.4054232618777,25.8821854733646,19.1252735788365,26.7030694167134,16.7442767907518,19.9712554502444,17.0698479510364,8.60630478782843,7.84890562969608,16.9158360705543,8.94377535741704,9.09911740564856,4.31257693094915,28.019695211642,23.211588544363,31.2567233202492,20.8380143189117,13.7536051170603,19.5955395065428,13.1505699558739,14.2827564403449,11.4089652631112,10.165335962074,13.3394219416671,19.7977937801908,15.8218618010716,12.0781619540837,9.28760342607055,9.22123932771731,16.4866483570479,13.6355997715008,14.7227472945967,11.4260393761521,13.4729809980484,14.3314235081496,17.827257609392,12.8690630125403,12.1127469099328,8.42736431362239,9.36999852863085,18.0684214190366,16.1933129176265,13.5437476344758,11.1673199600552,12.9435400307286,11.3070703354839,10.606629077052,13.0981946335175,11.5567656411686,46.7230612865746,27.2057616384428,29.5661778475711,47.3233132339763,22.4390540123558,37.7792234146472,42.2354671340985,38.9783391774682,34.1279940920157,39.0285438703752,28.8362465109184,28.9738451098479,16.9012103732017,25.6652954828636,7.64415719119937,14.2213340630666,20.3501578550541,26.8561457403604,26.7927955857835,57.206123739249,56.9663344023778,22.4147629987885,18.7364152907427,16.7456013071678,15.912469310668,19.2924979907357,29.1619993696548,26.2643175879022,34.360100515078,42.6568102913739,17.6922110389975,23.6179600923217,21.6424688091186,26.6681389224372,70.8288692628864,17.8596286177044,27.2280718857492,99.372794476142,27.5574786363617,22.1964010467561,28.8449415455857,12.1330417917906,10.980014467647,17.9685723521396,14.4274185759589,19.4343747571051,11.0127663616567,16.3863675698435,20.5715514977639,27.3695335342205,31.3376220457757,36.6168829242465,17.1758984710769,14.4838325793088,13.5046597354012,17.6324636867787,24.493139694478,25.8789714975397,21.1765897504987,25.8703370739016,17.4610074275602,19.0997140969497,20.2343792788541,18.1932457914887,18.9072129473407,30.2979384874285,20.7839957772023,14.3304672109315,22.4708219940235,22.6466158260949,31.2579849335152,18.2270679831242,19.7001890384121,19.6267646992506,17.7558551688908,20.6602443334774,18.6663206593728,22.5557926407896,18.7791380979733,30.4757543578312,24.1902979372816,29.8784784623953,28.2119457219578,25.8773977742838,33.1520674089486,27.5123158458762,13.6688466566683,16.8763564302026,124.898299967876,94.4088522988853,18.9826542976358,19.9723537799977,30.9281907173024,47.5973118111088,61.1539620573393,70.1932560355343,97.2784576166249,91.078521962378,90.7320103768973,83.163805313201,75.8410298893377,124.037078394283,131.411934323814,140.792880190838,17.6391147886366,18.965253093215,15.7790829942313,18.3286195060783,21.3347735884388,30.2986741926176,32.3771070076197,35.7216558110637,33.911725213737,35.7851775373221,45.6537045714209,20.1882577916474,20.4421354917731,27.2083155985673,21.9088931099583,21.2235900582127,25.9718368817048,21.5772103088108,46.3706748576601,50.519300026607,63.258010872036,59.914692574629,65.8399490271723,59.6086151955184,51.3076602672669,59.3405531276942,19.9533445379933,14.5908387063273,21.8373068432315,19.5206848641466,22.5302638356962,24.6234198439469,21.4239276797412,27.5138443479496,30.5812179566011,26.575762757853,32.3693180374699,30.4785765371273,31.6013516814589,35.1497212353073,49.7611236999598,28.8270012423916,44.7505488447323,39.183017975272,13.0045977890111,15.8235776899474,12.131185957874,27.5193310652767,15.7754109708128,16.7888660047555,16.5876016254255,13.3822526853429,15.1503098376028,20.9476632783736,16.1924280669958,15.4895604692995,13.8350722281283,15.4234231882467,21.8587731220734,15.4917075190512,22.3155134314399,24.5805483229078,25.2215762845929,17.9657670754686,19.6510312027088,23.3870298897314,20.3758306087733,18.4461088766356,42.6406683727565,33.081569382453,29.2327850275471,35.7121536467472,37.9506990869996,30.9406629744561,19.7454971337197,19.6266592494128,18.4982917809339,16.5039516974326,15.6059405605201,15.161349496176,15.3030589159972,23.1393361327095,31.4460088805372,26.9026729997052,127.465414075768,27.5360042412272,34.3919228862279,34.2577413591925,32.7080222568594,32.6640390492672,101.435331147188,15.5757253688828,26.1432447620715,18.3684312487268,26.4828174138688,39.3690075139804,36.3606645737927,38.4347330986958,23.9669586291336,24.6314556089638,23.7703954943609,80.1923319132695,18.5056556244964,28.0580864635051,31.3215488383224,30.5268912181124,31.2258466157034,49.3603507768444,53.2288254871163,63.6066939021192,115.746171149571,90.7155397106911,20.856638731315,13.90503878209,18.5313509311949,14.7782903141476,14.8533796999391,20.1057789334026,24.5276628769626,22.7857673476913,20.0281347853108,29.4732627407727,29.3790606383023,27.8089786152797,15.8125667926328,20.5421914329654,18.9684401547581,22.9154170454376,23.8417625737518,32.3325759208716,29.9809740164392,34.7324587821628,37.6461624875699,35.389990983031,30.5043166715425,34.155203782317,45.1144842420856,29.0214891027471,21.9766093840324,40.6403770440925,20.1461539636894,25.6942160062813,30.4045610230915,37.9123862233239,30.6546782083064,146.459054378326,11.2950368523413,11.9684561491866,10.8850147553485,15.4667864109319,10.9613203163303,10.5755145634558,14.1754725048679,9.90706647093285,16.3131267234314,10.3552062350364,13.5961425335271,15.9609949360412,22.5368359595457,16.531256760644,14.2536950587028,10.4790799816508,22.4469195079631,24.1061016969506,19.8969909946925,22.2373546352142,21.0387818908899,22.0692819421709,32.3063200771094,30.0918216302886,33.714620276945,26.1961530205691,23.7562868186954,27.7789277467735,23.4888963457885,23.5518272215036,18.8578088811978,21.2970967391205,30.0429599333624,25.4356229106575,26.2565171358772,25.638226191178,27.2562679580431,26.5700408552221,21.1854417599544,17.9565526930476,20.405223117358,24.3306071467642,24.5538625901814,25.0997682721265,21.0268205969444,18.9856039232839,21.0538447600868,29.6522054586652,28.11938481412,16.7649478530832,24.3461227401443
|short_description=p1@Pmm2
}}

Revision as of 13:12, 13 September 2013

Short description:p1@Pmm2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pmm2_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000130885, ENSMUST00000143174_5end
EntrezGene:Pmm2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pmm2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5136.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6106.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I378.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I486.65
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I796.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I899.29
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.09
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E641.61
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F138.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E447.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E846.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A123.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A332.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A531.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A233.28
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A438.53
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A633.53
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1101.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2100.94
GP2+ M cell, pool1.CNhs13228.11845-124H9103.36
GP2+ M cell, pool2.CNhs13231.11846-124I1110.71
GP2+ M cell, pool3.CNhs13240.11847-124I2143.50
Ileum epithelium, pool1.CNhs13199.10252-104B9168.17
Ileum epithelium, pool2.CNhs13232.10253-104C1127.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8151.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I321.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G618.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F549.10
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F659.18
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F746.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G832.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H146.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H342.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G925.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H426.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.97
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.07
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.92
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A228.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.26
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.84
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.60
Mouse Granule cells, donor1.CNhs12131.11713-123C313.15
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E715.82
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.08
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.56
Mouse Schwann, donor1.CNhs12507.11728-123D946.72
Mouse Schwann, donor2.CNhs12573.11746-123F927.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F747.32
Mouse hepatocyte, donor1.CNhs13078.11714-123C422.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C837.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F442.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F638.98
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I739.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E328.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I828.97
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B657.21
accessory axillary lymph node, adult.CNhs10475.1063-29H956.97
adrenal gland, adult.CNhs10508.49-24D722.41
adrenal gland, embryo E14.CNhs11038.406-44C518.74
adrenal gland, embryo E16.CNhs11004.1254-43D616.75
adrenal gland, embryo E17.CNhs11043.1263-45I115.91
adrenal gland, embryo E18.CNhs11026.1262-18F519.29
adrenal gland, neonate N00.CNhs11191.1311-23C129.16
adrenal gland, neonate N25.CNhs11223.1377-27I326.26
amnion, adult pregnant day17.5.CNhs10488.583-22A834.36
aorta, adult.CNhs10498.46-23H142.66
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F523.62
bone (os femoris), neonate N16.CNhs11225.1525-43A621.64
bone (os femoris), neonate N20.CNhs11195.1350-25C326.67
cecum, adult.CNhs10467.37-13H470.83
cerebellum, adult.CNhs10494.15-8B217.86
cerebellum, neonate N30.CNhs11135.1395-42I227.23
colon, adult.CNhs10468.36-18H799.37
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C727.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.84
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F117.97
cortex, adult.CNhs10473.12-14D514.43
cortex, neonate N30.CNhs11107.1392-42F219.43
diencephalon, adult.CNhs10482.20-12F211.01
diencephalon, neonate N30.CNhs11201.1388-42B216.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.37
epididymis, adult.CNhs10490.58-23B231.34
eyeball, adult.CNhs10484.31-12G436.62
eyeball, embryo E12.CNhs11016.345-16C617.18
eyeball, embryo E14.CNhs10521.399-16E214.48
eyeball, embryo E15.CNhs10593.426-16C913.50
eyeball, embryo E17.CNhs11023.1261-18D417.63
eyeball, neonate N00.CNhs11207.633-15C624.49
eyeball, neonate N01.CNhs11140.1532-43E725.88
eyeball, neonate N02.CNhs11205.1551-44G821.18
eyeball, neonate N16.CNhs11188.777-19A225.87
forelimb, embryo E11.CNhs10596.335-25E217.46
forelimb, embryo E12.CNhs10600.359-14H219.10
forelimb, embryo E13.CNhs10589.384-1E220.23
forelimb, embryo E14.CNhs10577.413-26A818.19
forelimb, embryo E15.CNhs11007.437-20E718.91
forelimb, embryo E17.CNhs10598.1517-43C430.30
forelimb, embryo E18.CNhs11008.1520-43B520.78
gonad, embryo E13.CNhs11044.1564-45I614.33
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C822.47
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D222.65
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D531.26
heart, embryo E11.CNhs10586.331-24E918.23
heart, embryo E12.CNhs11015.353-12F519.70
heart, embryo E13.CNhs11013.376-3I919.63
heart, embryo E14.CNhs10597.403-26D417.76
heart, embryo E15.CNhs11017.431-16C820.66
heart, embryo E16.CNhs11021.457-17C618.67
heart, embryo E17.CNhs11025.479-18E522.56
heart, embryo E18.CNhs11030.1283-20G318.78
heart, neonate N00.CNhs11213.639-21E330.48
heart, neonate N03.CNhs11221.1349-25I224.19
heart, neonate N10.CNhs11118.749-24G129.88
heart, neonate N16.CNhs11209.782-15G128.21
heart, neonate N20.CNhs11127.821-26I625.88
heart, neonate N25.CNhs11196.1351-25D333.15
heart, neonate N30.CNhs11202.1390-42D227.51
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G116.88
intestinal mucosa, adult.CNhs10506.860-29I3124.90
intestine, adult.CNhs10496.178-9A394.41
intestine, embryo E12.CNhs11019.1251-16I518.98
intestine, embryo E13.CNhs11010.381-16D519.97
intestine, embryo E15.CNhs10602.976-16D830.93
intestine, embryo E16.CNhs10585.463-22H447.60
intestine, embryo E17.CNhs10582.482-18D361.15
intestine, embryo E18.CNhs10526.1289-20F770.19
intestine, neonate N00.CNhs11126.644-26D197.28
intestine, neonate N01.CNhs11192.1322-23E991.08
intestine, neonate N06.CNhs11102.688-20B890.73
intestine, neonate N07.CNhs11095.720-20F283.16
intestine, neonate N10.CNhs11098.755-23A575.84
intestine, neonate N20.CNhs11187.827-18D1124.04
intestine, neonate N25.CNhs11121.1352-25E3131.41
intestine, neonate N30.CNhs11131.1384-42G1140.79
kidney, embryo E14.CNhs10606.411-4I917.64
kidney, embryo E15.CNhs10997.434-16F818.97
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I218.33
kidney, embryo E18.CNhs11001.1288-20C721.33
kidney, neonate N00.CNhs11214.646-21G730.30
kidney, neonate N10.CNhs11206.758-6D532.38
kidney, neonate N20.CNhs11113.832-19I135.72
kidney, neonate N25.CNhs11122.1353-25F333.91
kidney, neonate N30.CNhs11203.1385-42H135.79
liver, adult pregnant day01.CNhs10466.508-5B245.65
liver, embryo E12.CNhs10601.355-15F820.19
liver, embryo E13.CNhs10524.378-3H620.44
liver, embryo E14.CNhs10594.409-16E127.21
liver, embryo E15.CNhs10520.433-16D721.91
liver, embryo E16.CNhs10523.462-17F521.22
liver, embryo E17.CNhs10510.481-18A325.97
liver, embryo E18.CNhs10579.499-43G421.58
liver, neonate N00.CNhs11117.641-24F446.37
liver, neonate N03.CNhs11123.1345-25G250.52
liver, neonate N06.CNhs11101.684-20A863.26
liver, neonate N07.CNhs11103.716-20H259.91
liver, neonate N10.CNhs11115.751-24B965.84
liver, neonate N20.CNhs11220.823-25A359.61
liver, neonate N25.CNhs11198.1368-26H151.31
liver, neonate N30.CNhs11106.1382-42D159.34
lung, adult.CNhs10474.28-22B119.95
lung, embryo E12.CNhs10522.354-16G214.59
lung, embryo E14.CNhs10604.404-26F821.84
lung, embryo E15.CNhs11020.432-17C519.52
lung, embryo E16.CNhs10998.458-17B622.53
lung, embryo E17.CNhs10605.480-44A624.62
lung, embryo E18.CNhs10583.1287-20I621.42
lung, neonate N00.CNhs11224.640-42C627.51
lung, neonate N06.CNhs11212.683-20E530.58
lung, neonate N07.CNhs11111.715-19A326.58
lung, neonate N10.CNhs11219.750-23E632.37
lung, neonate N20.CNhs11109.822-18A430.48
lung, neonate N25.CNhs11119.1359-25C731.60
lung, neonate N30.CNhs11133.1394-42H235.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A149.76
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A128.83
mammary gland, adult lactating day02.CNhs10480.595-22B644.75
mammary gland, adult pregnant day19.CNhs10476.588-5H239.18
medulla oblongata, adult.CNhs10477.17-12C213.00
medulla oblongata, neonate N30.CNhs11200.1396-42A315.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.79
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.15
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.19
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I721.86
ovary, embryo E18.CNhs11040.505-44H715.49
ovary, neonate N00.CNhs11217.1299-22I422.32
oviduct, adult pregnant day01.CNhs10500.988-6G624.58
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F417.97
pancreas, embryo E15.CNhs11042.1556-45F219.65
pancreas, embryo E16.CNhs11003.460-26E523.39
pancreas, embryo E17.CNhs10599.1558-45G320.38
pancreas, embryo E18.CNhs10580.1535-43I718.45
pancreas, neonate N00.CNhs11105.645-26G942.64
pancreas, neonate N01.CNhs11138.1531-43D733.08
pancreas, neonate N02.CNhs11139.1539-43D829.23
pancreas, neonate N16.CNhs11136.787-43B635.71
pancreas, neonate N25.CNhs11094.1555-45E237.95
pancreas, neonate N30.CNhs11182.1548-44H530.94
pituitary gland, adult.CNhs10493.21-1G819.75
pituitary gland, embryo E12.CNhs11018.346-16E619.63
pituitary gland, embryo E13.CNhs11009.370-44C718.50
pituitary gland, embryo E14.CNhs11037.398-44A516.50
pituitary gland, embryo E15.CNhs10592.427-16B915.61
pituitary gland, embryo E16.CNhs11036.449-43F615.16
pituitary gland, embryo E17.CNhs11039.1265-44F515.30
pituitary gland, neonate N00.CNhs11190.1308-22E923.14
placenta, adult pregnant day10.CNhs10472.539-13I731.45
placenta, adult pregnant day17.CNhs10464.577-18G326.90
prostate, adult.CNhs10470.859-1F8127.47
skin, adult.CNhs10492.30-1C327.54
skin, neonate N00.CNhs11124.650-25G434.39
skin, neonate N03.CNhs11215.662-22H334.26
skin, neonate N06.CNhs11097.693-20I532.71
skin, neonate N10.CNhs11108.762-6C432.66
small intestine, neonate N16.CNhs11114.790-21I1101.44
spinal cord, adult.CNhs10505.24-13C915.58
spleen, adult.CNhs10465.25-2G226.14
spleen, embryo E16.CNhs11035.461-43C118.37
spleen, embryo E18.CNhs11011.1271-21F226.48
spleen, neonate N10.CNhs11116.752-24D139.37
spleen, neonate N20.CNhs11112.824-19H136.36
spleen, neonate N25.CNhs11099.1354-25G338.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C623.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C924.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.77
stomach, adult.CNhs10503.33-1H680.19
stomach, embryo E12.CNhs10588.356-43E318.51
stomach, embryo E15.CNhs10603.1252-16G828.06
stomach, embryo E16.CNhs11022.459-17D431.32
stomach, embryo E17.CNhs11006.1035-18D530.53
stomach, embryo E18.CNhs10999.1286-20C631.23
stomach, neonate N03.CNhs11193.1340-24B849.36
stomach, neonate N07.CNhs11210.718-18A953.23
stomach, neonate N25.CNhs11104.1355-25E463.61
stomach, neonate N30.CNhs11134.1386-42I1115.75
submandibular gland, adult.CNhs10469.59-29C190.72
testis, adult.CNhs10504.57-7G520.86
testis, embryo E13.CNhs11031.389-23F513.91
testis, embryo E15.CNhs11034.443-27C518.53
testis, embryo E16.CNhs11033.470-26G514.78
testis, embryo E17.CNhs11029.486-18I514.85
testis, embryo E18.CNhs11027.503-18G520.11
testis, neonate N00.CNhs11189.1300-22B724.53
testis, neonate N07.CNhs11222.726-26I422.79
testis, neonate N10.CNhs11204.763-44D920.03
testis, neonate N20.CNhs11110.839-18H329.47
testis, neonate N30.CNhs11130.1391-42E229.38
thymus, adult.CNhs10471.38-12B527.81
thymus, embryo E14.CNhs11041.402-44I415.81
thymus, embryo E15.CNhs11005.430-45I220.54
thymus, embryo E16.CNhs11002.456-26C518.97
thymus, embryo E17.CNhs10581.478-18C122.92
thymus, embryo E18.CNhs10595.1273-19G423.84
thymus, neonate N02.CNhs11181.1541-43F832.33
thymus, neonate N03.CNhs11137.2104-43C729.98
thymus, neonate N06.CNhs11197.681-26C434.73
thymus, neonate N07.CNhs11211.713-19D337.65
thymus, neonate N10.CNhs11194.748-24E435.39
thymus, neonate N20.CNhs11186.820-7A230.50
thymus, neonate N25.CNhs11125.1362-25G734.16
thymus, neonate N30.CNhs11132.1393-42G245.11
tongue, adult.CNhs10499.32-1B429.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F740.64
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.15
urinary bladder, adult.CNhs10481.879-12E425.69
uterus, adult pregnant day19.CNhs10497.590-15F530.40
uterus, adult.CNhs10509.92-27E537.91
vagina, adult.CNhs10502.89-27D530.65
vesicular gland, adult.CNhs10491.51-27F8146.46
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I813.60
whole body, embryo E12.CNhs10587.857-27C915.96
whole body, embryo E13.CNhs10512.372-23H222.54
whole body, embryo E14.5.CNhs10578.420-27D216.53
whole body, embryo E14.CNhs10519.395-14B114.25
whole body, embryo E16.CNhs10514.453-14F210.48
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.11
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G532.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G533.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.55
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G526.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G525.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.26
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.19
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G525.10
whole body, embryo E17.5.CNhs10513.490-9F921.03
whole body, embryo E17.CNhs10517.475-3I518.99
whole body, embryo E18.CNhs10516.493-3B321.05
whole body, neonate N00.CNhs10525.657-19C229.65
whole body, neonate N01.CNhs10576.659-23C628.12
whole body, neonate N06.CNhs10515.692-21D116.76
whole body, neonate N10.CNhs10518.761-6B424.35





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.08e-22118
endoderm1.08e-22118
presumptive endoderm1.08e-22118
digestive system2.24e-22116
digestive tract2.24e-22116
primitive gut2.24e-22116
subdivision of digestive tract4.12e-21114
gastrointestinal system1.28e-1747
intestine1.08e-1531
mucosa5.32e-1015
organ component layer1.39e-0924
intestinal mucosa8.31e-0913
wall of intestine8.31e-0913
gastrointestinal system mucosa8.31e-0913
gut epithelium1.67e-0855
endo-epithelium6.60e-0869
foregut4.72e-0780







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