FFCP PHASE1:Mm9::chr14:99625384..99625393,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=104|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:99625384..99625393,+|id=chr14:99625384..99625393,+|ontology_enrichment_celltype=CL:0002563!1.98e-07!9;CL:0002251!1.98e-07!9|ontology_enrichment_celltype_v019_2=CL:0002250,1.88e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.48e-27!43;UBERON:0005409!6.68e-20!59;UBERON:0000344!6.52e-15!15;UBERON:0001242!1.37e-11!13;UBERON:0000060!1.37e-11!13;UBERON:0001262!1.37e-11!13;UBERON:0004786!1.37e-11!13;UBERON:0004923!2.30e-08!24;UBERON:0000331!1.13e-07!3;UBERON:0002116!1.13e-07!3;UBERON:0001204!1.13e-07!3;UBERON:0001168!1.13e-07!3;UBERON:0003350!1.98e-07!9;UBERON:0004808!1.98e-07!9;UBERON:0001277!1.98e-07!9;UBERON:0001007!6.00e-07!128;UBERON:0001555!6.00e-07!128;UBERON:0007026!6.00e-07!128;UBERON:0004119!9.81e-07!130;UBERON:0000925!9.81e-07!130;UBERON:0006595!9.81e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.27e-47,31;UBERON:0005409,1.33e-33,47;UBERON:0000344,6.55e-18,15;UBERON:0002108,2.26e-15,4;UBERON:0001007,4.36e-14,116;UBERON:0001555,4.36e-14,116;UBERON:0007026,4.36e-14,116;UBERON:0004119,8.85e-14,118;UBERON:0000925,8.85e-14,118;UBERON:0006595,8.85e-14,118;UBERON:0001242,1.06e-12,13;UBERON:0001262,1.06e-12,13;UBERON:0004786,1.06e-12,13;UBERON:0000331,2.71e-12,3;UBERON:0002116,2.71e-12,3;UBERON:0001204,2.71e-12,3;UBERON:0001168,2.71e-12,3;UBERON:0004921,1.39e-11,114;UBERON:0004923,1.15e-10,24;UBERON:0001155,1.64e-08,2;UBERON:0000059,1.64e-08,2;UBERON:0001962,4.84e-08,2;UBERON:0001961,4.84e-08,2;UBERON:0001744,4.84e-08,2|phase1_expression=0,0,0.454999239389536,0,0,0.671517087647559,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,2.2940928106717,0.57423196411502,2.15380998079537,0.861884930743556,6.84084310042946,3.78045194639896,8.64748991555688,0,0,0,1.1554064790051,1.16364251750945,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.1422698558057,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0,0.77320476793256,1.4117846723634,0.667134131534611,1.14135375667535,2.37264530772256,1.81168850196412,1.50801125280162,3.97912944082302,2.72949721966768,1.79763881730844,3.8904848977445,7.76650965692032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.2191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr14:99625384..99625393,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=104 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:99625384..99625393,+ | |||
|id=chr14:99625384..99625393,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.98e-07!9;CL:0002251!1.98e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.88e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.48e-27!43;UBERON:0005409!6.68e-20!59;UBERON:0000344!6.52e-15!15;UBERON:0001242!1.37e-11!13;UBERON:0000060!1.37e-11!13;UBERON:0001262!1.37e-11!13;UBERON:0004786!1.37e-11!13;UBERON:0004923!2.30e-08!24;UBERON:0000331!1.13e-07!3;UBERON:0002116!1.13e-07!3;UBERON:0001204!1.13e-07!3;UBERON:0001168!1.13e-07!3;UBERON:0003350!1.98e-07!9;UBERON:0004808!1.98e-07!9;UBERON:0001277!1.98e-07!9;UBERON:0001007!6.00e-07!128;UBERON:0001555!6.00e-07!128;UBERON:0007026!6.00e-07!128;UBERON:0004119!9.81e-07!130;UBERON:0000925!9.81e-07!130;UBERON:0006595!9.81e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.27e-47,31;UBERON:0005409,1.33e-33,47;UBERON:0000344,6.55e-18,15;UBERON:0002108,2.26e-15,4;UBERON:0001007,4.36e-14,116;UBERON:0001555,4.36e-14,116;UBERON:0007026,4.36e-14,116;UBERON:0004119,8.85e-14,118;UBERON:0000925,8.85e-14,118;UBERON:0006595,8.85e-14,118;UBERON:0001242,1.06e-12,13;UBERON:0001262,1.06e-12,13;UBERON:0004786,1.06e-12,13;UBERON:0000331,2.71e-12,3;UBERON:0002116,2.71e-12,3;UBERON:0001204,2.71e-12,3;UBERON:0001168,2.71e-12,3;UBERON:0004921,1.39e-11,114;UBERON:0004923,1.15e-10,24;UBERON:0001155,1.64e-08,2;UBERON:0000059,1.64e-08,2;UBERON:0001962,4.84e-08,2;UBERON:0001961,4.84e-08,2;UBERON:0001744,4.84e-08,2 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.671517087647559,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,2.2940928106717,0.57423196411502,2.15380998079537,0.861884930743556,6.84084310042946,3.78045194639896,8.64748991555688,0,0,0,1.1554064790051,1.16364251750945,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.1422698558057,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0,0.77320476793256,1.4117846723634,0.667134131534611,1.14135375667535,2.37264530772256,1.81168850196412,1.50801125280162,3.97912944082302,2.72949721966768,1.79763881730844,3.8904848977445,7.76650965692032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.2191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr14:99625384..99625393,+ | |||
}} |
Revision as of 03:17, 13 September 2013
Short description: | p@chr14:99625384..99625393, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:99625384..99625393, + |
Coexpression cluster: | MCL_coexpression_mm9:104 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.88e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.27e-47 | 31 |
gastrointestinal system | 1.33e-33 | 47 |
mucosa | 6.55e-18 | 15 |
small intestine | 2.26e-15 | 4 |
digestive system | 4.36e-14 | 116 |
digestive tract | 4.36e-14 | 116 |
primitive gut | 4.36e-14 | 116 |
endoderm-derived structure | 8.85e-14 | 118 |
endoderm | 8.85e-14 | 118 |
presumptive endoderm | 8.85e-14 | 118 |
intestinal mucosa | 1.06e-12 | 13 |
wall of intestine | 1.06e-12 | 13 |
gastrointestinal system mucosa | 1.06e-12 | 13 |
ileal mucosa | 2.71e-12 | 3 |
ileum | 2.71e-12 | 3 |
mucosa of small intestine | 2.71e-12 | 3 |
wall of small intestine | 2.71e-12 | 3 |
subdivision of digestive tract | 1.39e-11 | 114 |
organ component layer | 1.15e-10 | 24 |
colon | 1.64e-08 | 2 |
large intestine | 1.64e-08 | 2 |
gut-associated lymphoid tissue | 4.84e-08 | 2 |
mucosa-associated lymphoid tissue | 4.84e-08 | 2 |
lymphoid tissue | 4.84e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.