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FFCP PHASE1:Mm9::chr14:75347672..75347690,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=380916|HGNC=|MCL_coexpression_id=2846|UniProt=F6V185,P62046,Q3UP01|association_with_transcript=0bp_to_ENSMUST00000088968,ENSMUST00000088970,NM_001033439,NM_001252132,uc007uqf.1,uc007uqg.1_5end|description=CAGE_peak_1_at_Lrch1_5end|id=chr14:75347672..75347690,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!3.01e-12!42;UBERON:0000065!3.62e-12!41;UBERON:0004177!4.50e-12!29;UBERON:0002390!3.62e-11!45;UBERON:0003061!3.62e-11!45;UBERON:0002193!6.87e-11!48;UBERON:0006562!1.70e-10!24;UBERON:0001557!1.70e-10!24;UBERON:0001042!1.70e-10!24;UBERON:0008814!1.70e-10!24;UBERON:0009145!1.70e-10!24;UBERON:0003408!5.26e-10!24;UBERON:0002370!5.51e-10!23;UBERON:0000974!5.51e-10!23;UBERON:0004807!5.51e-10!23;UBERON:0005058!5.51e-10!23;UBERON:0003351!5.51e-10!23;UBERON:0009113!5.51e-10!23;UBERON:0003295!5.51e-10!23;UBERON:0009722!5.51e-10!23;UBERON:0005562!5.51e-10!23;UBERON:0007690!5.51e-10!23;UBERON:0000072!5.23e-08!27;UBERON:0000077!1.53e-07!97;UBERON:0003081!2.27e-07!88;UBERON:0001041!4.44e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.22e-12,35;UBERON:0001004,3.01e-12,42;UBERON:0000065,3.62e-12,41;UBERON:0004177,4.50e-12,29;UBERON:0005057,4.50e-12,29;UBERON:0002390,3.62e-11,45;UBERON:0003061,3.62e-11,45;UBERON:0002193,6.87e-11,48;UBERON:0002405,6.87e-11,48;UBERON:0006562,1.70e-10,24;UBERON:0001557,1.70e-10,24;UBERON:0001042,1.70e-10,24;UBERON:0008814,1.70e-10,24;UBERON:0009145,1.70e-10,24;UBERON:0003408,5.26e-10,24;UBERON:0002370,5.51e-10,23;UBERON:0000974,5.51e-10,23;UBERON:0004807,5.51e-10,23;UBERON:0005058,5.51e-10,23;UBERON:0003351,5.51e-10,23;UBERON:0009113,5.51e-10,23;UBERON:0003295,5.51e-10,23;UBERON:0009722,5.51e-10,23;UBERON:0005562,5.51e-10,23;UBERON:0007690,5.51e-10,23;UBERON:0001041,1.23e-08,80;UBERON:0000072,5.23e-08,27;UBERON:0003081,5.98e-07,87|phase1_expression=14.8938427807458,9.77131141390211,9.55498402718026,16.9379958331825,13.023288978605,34.7510092857612,32.004931761587,60.946208664424,79.9679941821467,82.1566487390197,28.2509647572083,28.3988886023398,50.8466167895681,54.2006494997784,45.9691471305615,44.1396082909821,22.3859801001007,74.1336088591859,92.8264715510851,76.8145269754435,23.7270779521485,11.1205865344992,9.40319240900167,19.3590831580022,16.0586496747019,12.6331032105304,27.5687677541808,19.39241094173,10.6413114895569,13.6096270070363,14.8559442139054,17.14582818341,11.6862309641068,15.8481681015439,30.0405684541326,19.2832188615851,32.6670970019791,38.0863783970586,23.440060335714,19.8939022710043,41.176204162171,33.4692287629638,29.6161315349004,14.7299277031425,14.6996550268296,13.7660064121261,10.9534788208725,6.5407546914134,8.5677611266444,11.665793944457,8.81914456239784,14.3752564364972,63.4218250898243,63.8318684969983,80.3264179950489,7.46052364504246,14.6132054368766,13.4074743992135,12.3413041124355,10.0508286061686,13.3104594736298,6.43804610931351,5.33576877666684,18.8978940629094,17.7995945262055,20.6039233334369,11.3848041996994,11.5265491596466,13.1685807631767,11.0704869431986,9.46462326081219,21.7094748146891,16.565140571371,9.92175473641128,9.10531974673246,5.51531271966013,14.3150645299205,26.0482169693783,19.2008166570304,14.1118327871307,9.97215315266265,9.89735404057844,20.1011759280994,19.1339287410771,14.2102370432433,25.6326869362091,21.0710087582672,10.0655700745662,12.2676433199758,9.3708734532414,117.974846901583,35.2773789562368,7.47968467078526,6.47643829965381,20.1430689408777,23.7454250161588,17.1342192560737,17.8951838706961,13.2490862347463,21.9070536196411,16.4786801138716,43.6310023208681,96.8259910885254,206.209343914466,12.5564803786504,13.4280728701802,16.6823066854878,23.2935114626882,125.066997801584,28.797774978576,11.9704875468634,13.0920155674221,15.4512383161559,12.8114244469729,19.4021366773913,13.4463252722753,21.7531571606249,32.1010572362204,42.461306493594,20.8679236432158,31.3594956213759,32.0017667069247,33.550517019262,28.3997373101201,24.0863712835473,29.377561348988,24.6819156482196,14.3976655438418,20.7124470129095,27.4116870110826,22.8750301409313,21.3612398591869,20.1636211423041,18.9229438424445,21.1943805450751,23.3627418817571,20.0623546785123,24.2593592689681,9.09801930361229,19.7815344533286,10.0192741081282,9.88579049063934,10.9837899181263,17.1803492332715,16.8730517895293,14.3487366719032,13.118241438362,20.4375662883822,10.1316956678436,22.5036235399705,22.3457927688215,17.9740500590611,25.0242524303038,38.6559904839605,29.6326276427439,19.3063238813938,19.6619692447706,17.2423097766859,24.438060948021,19.0555710732662,15.4787199587523,14.4049649168812,24.8581972364471,20.0699516382352,21.9059300300077,21.6256568617879,19.8522317035718,23.8201298429026,19.9117418395311,29.221808606079,37.6159276292771,29.9709974221931,33.5911676395307,30.1964442210836,19.9775451135921,18.5228302282712,13.2167513193519,23.5361004330554,14.5036010363959,21.3657738111603,23.0672755766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|EntrezGene=380916
|HGNC=
|MCL_coexpression_id=2846
|UniProt=F6V185,P62046,Q3UP01
|association_with_transcript=0bp_to_ENSMUST00000088968,ENSMUST00000088970,NM_001033439,NM_001252132,uc007uqf.1,uc007uqg.1_5end
|description=CAGE_peak_1_at_Lrch1_5end
|id=chr14:75347672..75347690,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!3.01e-12!42;UBERON:0000065!3.62e-12!41;UBERON:0004177!4.50e-12!29;UBERON:0002390!3.62e-11!45;UBERON:0003061!3.62e-11!45;UBERON:0002193!6.87e-11!48;UBERON:0006562!1.70e-10!24;UBERON:0001557!1.70e-10!24;UBERON:0001042!1.70e-10!24;UBERON:0008814!1.70e-10!24;UBERON:0009145!1.70e-10!24;UBERON:0003408!5.26e-10!24;UBERON:0002370!5.51e-10!23;UBERON:0000974!5.51e-10!23;UBERON:0004807!5.51e-10!23;UBERON:0005058!5.51e-10!23;UBERON:0003351!5.51e-10!23;UBERON:0009113!5.51e-10!23;UBERON:0003295!5.51e-10!23;UBERON:0009722!5.51e-10!23;UBERON:0005562!5.51e-10!23;UBERON:0007690!5.51e-10!23;UBERON:0000072!5.23e-08!27;UBERON:0000077!1.53e-07!97;UBERON:0003081!2.27e-07!88;UBERON:0001041!4.44e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.22e-12,35;UBERON:0001004,3.01e-12,42;UBERON:0000065,3.62e-12,41;UBERON:0004177,4.50e-12,29;UBERON:0005057,4.50e-12,29;UBERON:0002390,3.62e-11,45;UBERON:0003061,3.62e-11,45;UBERON:0002193,6.87e-11,48;UBERON:0002405,6.87e-11,48;UBERON:0006562,1.70e-10,24;UBERON:0001557,1.70e-10,24;UBERON:0001042,1.70e-10,24;UBERON:0008814,1.70e-10,24;UBERON:0009145,1.70e-10,24;UBERON:0003408,5.26e-10,24;UBERON:0002370,5.51e-10,23;UBERON:0000974,5.51e-10,23;UBERON:0004807,5.51e-10,23;UBERON:0005058,5.51e-10,23;UBERON:0003351,5.51e-10,23;UBERON:0009113,5.51e-10,23;UBERON:0003295,5.51e-10,23;UBERON:0009722,5.51e-10,23;UBERON:0005562,5.51e-10,23;UBERON:0007690,5.51e-10,23;UBERON:0001041,1.23e-08,80;UBERON:0000072,5.23e-08,27;UBERON:0003081,5.98e-07,87
|phase1_expression=14.8938427807458,9.77131141390211,9.55498402718026,16.9379958331825,13.023288978605,34.7510092857612,32.004931761587,60.946208664424,79.9679941821467,82.1566487390197,28.2509647572083,28.3988886023398,50.8466167895681,54.2006494997784,45.9691471305615,44.1396082909821,22.3859801001007,74.1336088591859,92.8264715510851,76.8145269754435,23.7270779521485,11.1205865344992,9.40319240900167,19.3590831580022,16.0586496747019,12.6331032105304,27.5687677541808,19.39241094173,10.6413114895569,13.6096270070363,14.8559442139054,17.14582818341,11.6862309641068,15.8481681015439,30.0405684541326,19.2832188615851,32.6670970019791,38.0863783970586,23.440060335714,19.8939022710043,41.176204162171,33.4692287629638,29.6161315349004,14.7299277031425,14.6996550268296,13.7660064121261,10.9534788208725,6.5407546914134,8.5677611266444,11.665793944457,8.81914456239784,14.3752564364972,63.4218250898243,63.8318684969983,80.3264179950489,7.46052364504246,14.6132054368766,13.4074743992135,12.3413041124355,10.0508286061686,13.3104594736298,6.43804610931351,5.33576877666684,18.8978940629094,17.7995945262055,20.6039233334369,11.3848041996994,11.5265491596466,13.1685807631767,11.0704869431986,9.46462326081219,21.7094748146891,16.565140571371,9.92175473641128,9.10531974673246,5.51531271966013,14.3150645299205,26.0482169693783,19.2008166570304,14.1118327871307,9.97215315266265,9.89735404057844,20.1011759280994,19.1339287410771,14.2102370432433,25.6326869362091,21.0710087582672,10.0655700745662,12.2676433199758,9.3708734532414,117.974846901583,35.2773789562368,7.47968467078526,6.47643829965381,20.1430689408777,23.7454250161588,17.1342192560737,17.8951838706961,13.2490862347463,21.9070536196411,16.4786801138716,43.6310023208681,96.8259910885254,206.209343914466,12.5564803786504,13.4280728701802,16.6823066854878,23.2935114626882,125.066997801584,28.797774978576,11.9704875468634,13.0920155674221,15.4512383161559,12.8114244469729,19.4021366773913,13.4463252722753,21.7531571606249,32.1010572362204,42.461306493594,20.8679236432158,31.3594956213759,32.0017667069247,33.550517019262,28.3997373101201,24.0863712835473,29.377561348988,24.6819156482196,14.3976655438418,20.7124470129095,27.4116870110826,22.8750301409313,21.3612398591869,20.1636211423041,18.9229438424445,21.1943805450751,23.3627418817571,20.0623546785123,24.2593592689681,9.09801930361229,19.7815344533286,10.0192741081282,9.88579049063934,10.9837899181263,17.1803492332715,16.8730517895293,14.3487366719032,13.118241438362,20.4375662883822,10.1316956678436,22.5036235399705,22.3457927688215,17.9740500590611,25.0242524303038,38.6559904839605,29.6326276427439,19.3063238813938,19.6619692447706,17.2423097766859,24.438060948021,19.0555710732662,15.4787199587523,14.4049649168812,24.8581972364471,20.0699516382352,21.9059300300077,21.6256568617879,19.8522317035718,23.8201298429026,19.9117418395311,29.221808606079,37.6159276292771,29.9709974221931,33.5911676395307,30.1964442210836,19.9775451135921,18.5228302282712,13.2167513193519,23.5361004330554,14.5036010363959,21.3657738111603,23.0672755766547,17.9498336914775,15.3440850252961,15.0278244628922,24.2009821387701,12.8465184684728,17.8447998248191,25.068515477185,16.9618755793635,26.9645822596266,16.2103537406021,20.9098336917086,14.2250925714811,19.6507441688734,42.8289395557706,30.5476991767971,25.7956807932942,27.7737846765661,31.8079781735014,27.1602672282468,29.6727595620198,23.1986668172985,15.1190839814446,12.6802280344231,15.3316016188298,15.9652099793246,20.6917323816273,22.9118301764796,21.8978232532021,26.7557407829254,17.1863340381537,12.0807021802756,23.0029130443767,27.1662891798007,25.2750515222794,22.7320990152401,16.8633568710597,14.473305640901,81.1066504831394,14.9698215298683,22.4891667489996,28.1776842386812,28.8669005394858,35.6788328351068,47.3706845363167,39.807264162991,51.0737866904059,44.0714732401062,44.6473352240964,54.402620485625,50.9420696504392,56.1238347296265,37.6978209848181,47.8637001760464,23.1129208318947,23.4546234359023,21.9954308283275,18.2850231083837,6.22952792431367,14.1383719234449,12.9358369960665,14.055794794679,18.9572590004863,15.0550342710108,11.1399337041197,23.7784285862619,19.02610297872,15.7818163272108,20.5549644532192,19.6006003017302,33.0720398535266,13.7110514823787,20.5237568785506,40.7476203742163,25.2215762845929,16.7518638946937,11.7906187216253,11.5049098651098,16.2416041084425,22.1353306519628,25.0675444373175,29.0826983582004,24.241821730161,26.2310509086727,21.0837217149998,15.470331487228,20.0859367394735,12.784337676223,9.05510786479281,15.6466035573062,18.9754049997233,17.3017753074008,20.404078554663,18.5723618959906,14.3149741918863,38.3416048263514,20.9501978152214,63.4812073824698,52.7988675295611,38.4193331792353,31.8724158488374,34.3054480467178,23.3184669303881,27.999220603587,52.9699730473343,27.6558403070718,32.9646258718087,35.2249014598772,51.5337238508265,40.0361803111415,31.2760311188694,37.9268435797113,32.3387938702352,32.4588010125139,13.1279437336171,27.0414891278709,17.6048705539536,21.9542710815192,27.5136830320184,30.074749243815,33.8052633916624,29.3166655022113,19.0534010738935,28.5816084019986,2.25477175473676,15.5497207885738,9.43113395605456,17.1117045742762,14.0784207590727,19.767866682421,27.2268793658149,23.436789271911,24.3273679067649,7.00593950395418,5.76060012515731,70.7864910207119,19.2588954525656,24.6506297195585,27.9329769402259,42.9664069601955,40.7296777301593,37.1403939016704,42.977652407802,40.4875464292072,43.9713274399349,46.9850022737677,57.9874390401527,48.5869800283664,58.0878203842398,46.4797286411183,5.99362074109975,4.57540668708326,4.02923079273788,39.7970563706312,26.4632290386167,35.3482634835822,37.0857295806784,29.5927541380864,31.6261031865557,27.1591889539234,27.498984645091,21.4816477929609,13.7016503954128,17.3740596399631,22.2757425076496,16.6618845192962,20.8445508132734,20.192652158321,6.84996494055566,26.3356416444681,15.7074917293803,25.2830985751026,13.8344687334468,23.5319690816018,30.8922951644245,38.940625818151,45.2496085524459,40.9369483057352,42.8380016814505,32.4437307184051,28.4670182708443,33.2290540981272,30.2684921396082,29.5302088595506,31.6364209829455,30.8654752741928,29.6701848578381,32.236563509433,33.9440559861561,31.5906934963621,31.950449452941,35.0284864083912,28.6092516462605,32.1535509988371,32.195323225608,38.1451081584872,32.457183209161,38.718816744384,34.8786953285072,31.6199388425559,36.0123317989327,28.0435682546598,32.0224974228695,25.2308683717325,32.2825619654664,33.7347554855828,30.6061331310149,27.3533359708199,19.9406338633562
|short_description=p1@Lrch1
}}

Revision as of 03:05, 13 September 2013

Short description:p1@Lrch1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrch1_5end
Coexpression cluster:MCL_coexpression_mm9:2846
Association with transcript: 0bp_to_ENSMUST00000088968, ENSMUST00000088970, NM_001033439, NM_001252132, uc007uqf.1, uc007uqg.1_5end
EntrezGene:Lrch1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrch1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.75
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I832.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E960.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E779.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F282.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E628.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F128.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E450.85
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E854.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A145.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A344.14
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A522.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A274.13
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A492.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A676.81
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.06
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I127.57
GP2+ M cell, pool3.CNhs13240.11847-124I219.39
Ileum epithelium, pool1.CNhs13199.10252-104B910.64
Ileum epithelium, pool2.CNhs13232.10253-104C113.61
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F530.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G838.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H319.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G941.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H233.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.70
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A263.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I963.83
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A180.33
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C312.34
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D220.60
Mouse Microglia, donor1.CNhs12629.11718-123C811.38
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.17
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.57
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.63
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.07
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D912.27
Mouse Schwann, donor2.CNhs12573.11746-123F99.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3117.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F735.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.91
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H143.63
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I896.83
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6206.21
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.29
accessory axillary lymph node, adult.CNhs10475.1063-29H9125.07
adrenal gland, adult.CNhs10508.49-24D728.80
adrenal gland, embryo E14.CNhs11038.406-44C511.97
adrenal gland, embryo E16.CNhs11004.1254-43D613.09
adrenal gland, embryo E17.CNhs11043.1263-45I115.45
adrenal gland, embryo E18.CNhs11026.1262-18F512.81
adrenal gland, neonate N00.CNhs11191.1311-23C119.40
adrenal gland, neonate N25.CNhs11223.1377-27I313.45
amnion, adult pregnant day17.5.CNhs10488.583-22A821.75
aorta, adult.CNhs10498.46-23H132.10
bone (os femoris), adult.CNhs10483.56-12G242.46
bone (os femoris), neonate N02.CNhs11227.1985-43F520.87
bone (os femoris), neonate N16.CNhs11225.1525-43A631.36
bone (os femoris), neonate N20.CNhs11195.1350-25C332.00
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B228.40
cerebellum, neonate N30.CNhs11135.1395-42I224.09
colon, adult.CNhs10468.36-18H729.38
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.71
corpora quadrigemina, adult.CNhs10501.16-22A427.41
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F121.36
cortex, adult.CNhs10473.12-14D520.16
cortex, neonate N30.CNhs11107.1392-42F218.92
diencephalon, adult.CNhs10482.20-12F221.19
diencephalon, neonate N30.CNhs11201.1388-42B223.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.26
epididymis, adult.CNhs10490.58-23B29.10
eyeball, adult.CNhs10484.31-12G419.78
eyeball, embryo E12.CNhs11016.345-16C610.02
eyeball, embryo E14.CNhs10521.399-16E29.89
eyeball, embryo E15.CNhs10593.426-16C910.98
eyeball, embryo E17.CNhs11023.1261-18D417.18
eyeball, neonate N00.CNhs11207.633-15C616.87
eyeball, neonate N01.CNhs11140.1532-43E714.35
eyeball, neonate N02.CNhs11205.1551-44G813.12
eyeball, neonate N16.CNhs11188.777-19A220.44
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H222.50
forelimb, embryo E13.CNhs10589.384-1E222.35
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E725.02
forelimb, embryo E17.CNhs10598.1517-43C438.66
forelimb, embryo E18.CNhs11008.1520-43B529.63
gonad, embryo E13.CNhs11044.1564-45I619.31
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D217.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D524.44
heart, embryo E11.CNhs10586.331-24E919.06
heart, embryo E12.CNhs11015.353-12F515.48
heart, embryo E13.CNhs11013.376-3I914.40
heart, embryo E14.CNhs10597.403-26D424.86
heart, embryo E15.CNhs11017.431-16C820.07
heart, embryo E16.CNhs11021.457-17C621.91
heart, embryo E17.CNhs11025.479-18E521.63
heart, embryo E18.CNhs11030.1283-20G319.85
heart, neonate N00.CNhs11213.639-21E323.82
heart, neonate N03.CNhs11221.1349-25I219.91
heart, neonate N10.CNhs11118.749-24G129.22
heart, neonate N16.CNhs11209.782-15G137.62
heart, neonate N20.CNhs11127.821-26I629.97
heart, neonate N25.CNhs11196.1351-25D333.59
heart, neonate N30.CNhs11202.1390-42D230.20
hippocampus, adult.CNhs10478.13-16E819.98
hippocampus, neonate N00.CNhs11228.627-43G118.52
intestinal mucosa, adult.CNhs10506.860-29I313.22
intestine, adult.CNhs10496.178-9A323.54
intestine, embryo E12.CNhs11019.1251-16I514.50
intestine, embryo E13.CNhs11010.381-16D521.37
intestine, embryo E15.CNhs10602.976-16D823.07
intestine, embryo E16.CNhs10585.463-22H417.95
intestine, embryo E17.CNhs10582.482-18D315.34
intestine, embryo E18.CNhs10526.1289-20F715.03
intestine, neonate N00.CNhs11126.644-26D124.20
intestine, neonate N01.CNhs11192.1322-23E912.85
intestine, neonate N06.CNhs11102.688-20B817.84
intestine, neonate N07.CNhs11095.720-20F225.07
intestine, neonate N10.CNhs11098.755-23A516.96
intestine, neonate N20.CNhs11187.827-18D126.96
intestine, neonate N25.CNhs11121.1352-25E316.21
intestine, neonate N30.CNhs11131.1384-42G120.91
kidney, embryo E14.CNhs10606.411-4I914.23
kidney, embryo E15.CNhs10997.434-16F819.65
kidney, embryo E16.CNhs10584.464-22A542.83
kidney, embryo E17.CNhs11028.483-18I230.55
kidney, embryo E18.CNhs11001.1288-20C725.80
kidney, neonate N00.CNhs11214.646-21G727.77
kidney, neonate N10.CNhs11206.758-6D531.81
kidney, neonate N20.CNhs11113.832-19I127.16
kidney, neonate N25.CNhs11122.1353-25F329.67
kidney, neonate N30.CNhs11203.1385-42H123.20
liver, adult pregnant day01.CNhs10466.508-5B215.12
liver, embryo E12.CNhs10601.355-15F812.68
liver, embryo E13.CNhs10524.378-3H615.33
liver, embryo E14.CNhs10594.409-16E115.97
liver, embryo E15.CNhs10520.433-16D720.69
liver, embryo E16.CNhs10523.462-17F522.91
liver, embryo E17.CNhs10510.481-18A321.90
liver, embryo E18.CNhs10579.499-43G426.76
liver, neonate N00.CNhs11117.641-24F417.19
liver, neonate N03.CNhs11123.1345-25G212.08
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H227.17
liver, neonate N10.CNhs11115.751-24B925.28
liver, neonate N20.CNhs11220.823-25A322.73
liver, neonate N25.CNhs11198.1368-26H116.86
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B181.11
lung, embryo E12.CNhs10522.354-16G214.97
lung, embryo E14.CNhs10604.404-26F822.49
lung, embryo E15.CNhs11020.432-17C528.18
lung, embryo E16.CNhs10998.458-17B628.87
lung, embryo E17.CNhs10605.480-44A635.68
lung, embryo E18.CNhs10583.1287-20I647.37
lung, neonate N00.CNhs11224.640-42C639.81
lung, neonate N06.CNhs11212.683-20E551.07
lung, neonate N07.CNhs11111.715-19A344.07
lung, neonate N10.CNhs11219.750-23E644.65
lung, neonate N20.CNhs11109.822-18A454.40
lung, neonate N25.CNhs11119.1359-25C750.94
lung, neonate N30.CNhs11133.1394-42H256.12
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A137.70
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A147.86
mammary gland, adult lactating day02.CNhs10480.595-22B623.11
mammary gland, adult pregnant day19.CNhs10476.588-5H223.45
medulla oblongata, adult.CNhs10477.17-12C222.00
medulla oblongata, neonate N30.CNhs11200.1396-42A318.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.14
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.96
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.55
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I733.07
ovary, embryo E18.CNhs11040.505-44H713.71
ovary, neonate N00.CNhs11217.1299-22I420.52
oviduct, adult pregnant day01.CNhs10500.988-6G640.75
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F416.75
pancreas, embryo E15.CNhs11042.1556-45F211.79
pancreas, embryo E16.CNhs11003.460-26E511.50
pancreas, embryo E17.CNhs10599.1558-45G316.24
pancreas, embryo E18.CNhs10580.1535-43I722.14
pancreas, neonate N00.CNhs11105.645-26G925.07
pancreas, neonate N01.CNhs11138.1531-43D729.08
pancreas, neonate N02.CNhs11139.1539-43D824.24
pancreas, neonate N16.CNhs11136.787-43B626.23
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E612.78
pituitary gland, embryo E13.CNhs11009.370-44C79.06
pituitary gland, embryo E14.CNhs11037.398-44A515.65
pituitary gland, embryo E15.CNhs10592.427-16B918.98
pituitary gland, embryo E16.CNhs11036.449-43F617.30
pituitary gland, embryo E17.CNhs11039.1265-44F520.40
pituitary gland, neonate N00.CNhs11190.1308-22E918.57
placenta, adult pregnant day10.CNhs10472.539-13I714.31
placenta, adult pregnant day17.CNhs10464.577-18G338.34
prostate, adult.CNhs10470.859-1F820.95
skin, adult.CNhs10492.30-1C363.48
skin, neonate N00.CNhs11124.650-25G452.80
skin, neonate N03.CNhs11215.662-22H338.42
skin, neonate N06.CNhs11097.693-20I531.87
skin, neonate N10.CNhs11108.762-6C434.31
small intestine, neonate N16.CNhs11114.790-21I123.32
spinal cord, adult.CNhs10505.24-13C928.00
spleen, adult.CNhs10465.25-2G252.97
spleen, embryo E16.CNhs11035.461-43C127.66
spleen, embryo E18.CNhs11011.1271-21F232.96
spleen, neonate N10.CNhs11116.752-24D135.22
spleen, neonate N20.CNhs11112.824-19H151.53
spleen, neonate N25.CNhs11099.1354-25G340.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C631.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.34
stomach, adult.CNhs10503.33-1H632.46
stomach, embryo E12.CNhs10588.356-43E313.13
stomach, embryo E15.CNhs10603.1252-16G827.04
stomach, embryo E16.CNhs11022.459-17D417.60
stomach, embryo E17.CNhs11006.1035-18D521.95
stomach, embryo E18.CNhs10999.1286-20C627.51
stomach, neonate N03.CNhs11193.1340-24B830.07
stomach, neonate N07.CNhs11210.718-18A933.81
stomach, neonate N25.CNhs11104.1355-25E429.32
stomach, neonate N30.CNhs11134.1386-42I119.05
submandibular gland, adult.CNhs10469.59-29C128.58
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F515.55
testis, embryo E15.CNhs11034.443-27C59.43
testis, embryo E16.CNhs11033.470-26G517.11
testis, embryo E17.CNhs11029.486-18I514.08
testis, embryo E18.CNhs11027.503-18G519.77
testis, neonate N00.CNhs11189.1300-22B727.23
testis, neonate N07.CNhs11222.726-26I423.44
testis, neonate N10.CNhs11204.763-44D924.33
testis, neonate N20.CNhs11110.839-18H37.01
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B570.79
thymus, embryo E14.CNhs11041.402-44I419.26
thymus, embryo E15.CNhs11005.430-45I224.65
thymus, embryo E16.CNhs11002.456-26C527.93
thymus, embryo E17.CNhs10581.478-18C142.97
thymus, embryo E18.CNhs10595.1273-19G440.73
thymus, neonate N02.CNhs11181.1541-43F837.14
thymus, neonate N03.CNhs11137.2104-43C742.98
thymus, neonate N06.CNhs11197.681-26C440.49
thymus, neonate N07.CNhs11211.713-19D343.97
thymus, neonate N10.CNhs11194.748-24E446.99
thymus, neonate N20.CNhs11186.820-7A257.99
thymus, neonate N25.CNhs11125.1362-25G748.59
thymus, neonate N30.CNhs11132.1393-42G258.09
tongue, adult.CNhs10499.32-1B446.48
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.58
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E439.80
uterus, adult pregnant day19.CNhs10497.590-15F526.46
uterus, adult.CNhs10509.92-27E535.35
vagina, adult.CNhs10502.89-27D537.09
vesicular gland, adult.CNhs10491.51-27F829.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A327.50
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I86.85
whole body, embryo E12.CNhs10587.857-27C926.34
whole body, embryo E13.CNhs10512.372-23H215.71
whole body, embryo E14.5.CNhs10578.420-27D225.28
whole body, embryo E14.CNhs10519.395-14B113.83
whole body, embryo E16.CNhs10514.453-14F223.53
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G538.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G545.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G540.94
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G542.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G532.44
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G529.67
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G533.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.59
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G532.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G532.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G538.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G538.72
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G534.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G536.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.04
whole body, embryo E17.5.CNhs10513.490-9F932.02
whole body, embryo E17.CNhs10517.475-3I525.23
whole body, embryo E18.CNhs10516.493-3B332.28
whole body, neonate N00.CNhs10525.657-19C233.73
whole body, neonate N01.CNhs10576.659-23C630.61
whole body, neonate N06.CNhs10515.692-21D127.35
whole body, neonate N10.CNhs10518.761-6B419.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mixed endoderm/mesoderm-derived structure1.22e-1235
respiratory system3.01e-1242
respiratory tract3.62e-1241
hemopoietic organ4.50e-1229
immune organ4.50e-1229
hematopoietic system3.62e-1145
blood island3.62e-1145
hemolymphoid system6.87e-1148
immune system6.87e-1148
pharynx1.70e-1024
upper respiratory tract1.70e-1024
chordate pharynx1.70e-1024
pharyngeal arch system1.70e-1024
pharyngeal region of foregut1.70e-1024
gland of gut5.26e-1024
thymus5.51e-1023
neck5.51e-1023
respiratory system epithelium5.51e-1023
hemolymphoid system gland5.51e-1023
pharyngeal epithelium5.51e-1023
thymic region5.51e-1023
pharyngeal gland5.51e-1023
entire pharyngeal arch endoderm5.51e-1023
thymus primordium5.51e-1023
early pharyngeal endoderm5.51e-1023
foregut1.23e-0880
segment of respiratory tract5.23e-0827
lateral plate mesoderm5.98e-0787







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