FFCP PHASE1:Mm9::chr12:3873135..3873145,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=86|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:3873135..3873145,+|id=chr12:3873135..3873145,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,1.78e-26,2;CL:0002194,8.72e-14,4;CL:0000766,8.72e-14,4;CL:0000234,8.72e-14,4;CL:0000576,8.72e-14,4;CL:0000235,8.72e-14,4;CL:0000864,8.72e-14,4;CL:0002009,8.72e-14,4;CL:0000040,8.72e-14,4;CL:0000559,8.72e-14,4;CL:0000473,2.72e-08,7;CL:0000557,2.72e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.87e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0000981,1.56e-13,4;UBERON:0003608,1.56e-13,4;UBERON:0003826,1.56e-13,4;UBERON:0008202,1.56e-13,4;UBERON:0004381,1.56e-13,4;UBERON:0007273,1.56e-13,4;UBERON:0010912,1.56e-13,4;UBERON:0002513,1.56e-13,4;UBERON:0004375,1.56e-13,4;UBERON:0010740,1.56e-13,4;UBERON:0010363,1.56e-13,4;UBERON:0003860,1.56e-13,4;UBERON:0002428,1.56e-13,4;UBERON:0010742,1.56e-13,4;UBERON:0002495,1.56e-13,4;UBERON:0003464,1.56e-13,4;UBERON:0003606,1.56e-13,4;UBERON:0005893,1.56e-13,4;UBERON:0009749,1.56e-13,4;UBERON:0010712,1.56e-13,4;UBERON:0010886,1.56e-13,4;UBERON:0005254,1.56e-13,4;UBERON:0010885,1.56e-13,4;UBERON:0010881,1.56e-13,4;UBERON:0010882,1.56e-13,4;UBERON:0007844,1.56e-13,4;UBERON:0001441,1.56e-13,4;UBERON:0011249,1.56e-13,4;UBERON:0002091,1.56e-13,4;UBERON:0003285,1.56e-13,4;UBERON:0004288,1.56e-13,4;UBERON:0010129,1.56e-13,4;UBERON:0006234,1.56e-13,4;UBERON:0005418,4.98e-11,5;UBERON:0002472,4.98e-11,5;UBERON:0008784,4.98e-11,5;UBERON:0006058,4.98e-11,5;UBERON:0004709,4.98e-11,5;UBERON:0002529,4.98e-11,5;UBERON:0010538,4.98e-11,5;UBERON:0005420,4.98e-11,5;UBERON:0010758,4.98e-11,5;UBERON:0000978,4.98e-11,5;UBERON:0002103,4.98e-11,5;UBERON:0000376,4.98e-11,5;UBERON:0000154,4.98e-11,5;UBERON:0010709,4.98e-11,5;UBERON:0005730,4.98e-11,5;UBERON:0001474,1.05e-09,22;UBERON:0004765,1.05e-09,22;UBERON:0001434,1.05e-09,22;UBERON:0000075,2.37e-09,6;UBERON:0005856,2.37e-09,6;UBERON:0005866,2.37e-09,6;UBERON:0005863,2.37e-09,6;UBERON:0001343,2.35e-07,2;UBERON:0004910,2.35e-07,2;UBERON:0004909,2.35e-07,2;UBERON:0005154,2.35e-07,2;UBERON:0005295,2.35e-07,2;UBERON:0005297,2.35e-07,2;UBERON:0005294,2.35e-07,2;UBERON:0010141,2.35e-07,2;UBERON:0005891,2.35e-07,2;UBERON:0002204,8.50e-07,32|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0.0797721589953364,0,0.174840804837995,0,0,0.699561878128147,0.315462165358238,0.411343300817216,0,0.0850432901510698,0.595745707205312,0,0.799962113967033,0.91763712426868,0,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0.117588707135705,0.251333182659351,0,0.144599356919912,0,3.07357014900077,1.76673214768315,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.342745537829186,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0.505157755894224,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.144649058581512,4.52373851817817,8.15858525728064,0,0,0,0,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0,0,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0,0.341741761595705,0,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.295379054349154,0.504832249740738,0.228620419965,0.504130925684203,0.38983152295901,0.865906574762965,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.735374033800057,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,1.2673964994512,0.377252682772152,0.561849044819294,0.384150914429216,0.34461281373368,0,0.347652977834566,0.578727661391115,0.824171801606613,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0,0.543216455383447,1.68342681497322,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.935726433781634,0.644613162144895,0.765153328275374,0.661774257358546,0.463735671240843|short_description=p@chr12:3873135..3873145,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:3873135..3873145,+ | |||
|id=chr12:3873135..3873145,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.78e-26,2;CL:0002194,8.72e-14,4;CL:0000766,8.72e-14,4;CL:0000234,8.72e-14,4;CL:0000576,8.72e-14,4;CL:0000235,8.72e-14,4;CL:0000864,8.72e-14,4;CL:0002009,8.72e-14,4;CL:0000040,8.72e-14,4;CL:0000559,8.72e-14,4;CL:0000473,2.72e-08,7;CL:0000557,2.72e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.87e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000981,1.56e-13,4;UBERON:0003608,1.56e-13,4;UBERON:0003826,1.56e-13,4;UBERON:0008202,1.56e-13,4;UBERON:0004381,1.56e-13,4;UBERON:0007273,1.56e-13,4;UBERON:0010912,1.56e-13,4;UBERON:0002513,1.56e-13,4;UBERON:0004375,1.56e-13,4;UBERON:0010740,1.56e-13,4;UBERON:0010363,1.56e-13,4;UBERON:0003860,1.56e-13,4;UBERON:0002428,1.56e-13,4;UBERON:0010742,1.56e-13,4;UBERON:0002495,1.56e-13,4;UBERON:0003464,1.56e-13,4;UBERON:0003606,1.56e-13,4;UBERON:0005893,1.56e-13,4;UBERON:0009749,1.56e-13,4;UBERON:0010712,1.56e-13,4;UBERON:0010886,1.56e-13,4;UBERON:0005254,1.56e-13,4;UBERON:0010885,1.56e-13,4;UBERON:0010881,1.56e-13,4;UBERON:0010882,1.56e-13,4;UBERON:0007844,1.56e-13,4;UBERON:0001441,1.56e-13,4;UBERON:0011249,1.56e-13,4;UBERON:0002091,1.56e-13,4;UBERON:0003285,1.56e-13,4;UBERON:0004288,1.56e-13,4;UBERON:0010129,1.56e-13,4;UBERON:0006234,1.56e-13,4;UBERON:0005418,4.98e-11,5;UBERON:0002472,4.98e-11,5;UBERON:0008784,4.98e-11,5;UBERON:0006058,4.98e-11,5;UBERON:0004709,4.98e-11,5;UBERON:0002529,4.98e-11,5;UBERON:0010538,4.98e-11,5;UBERON:0005420,4.98e-11,5;UBERON:0010758,4.98e-11,5;UBERON:0000978,4.98e-11,5;UBERON:0002103,4.98e-11,5;UBERON:0000376,4.98e-11,5;UBERON:0000154,4.98e-11,5;UBERON:0010709,4.98e-11,5;UBERON:0005730,4.98e-11,5;UBERON:0001474,1.05e-09,22;UBERON:0004765,1.05e-09,22;UBERON:0001434,1.05e-09,22;UBERON:0000075,2.37e-09,6;UBERON:0005856,2.37e-09,6;UBERON:0005866,2.37e-09,6;UBERON:0005863,2.37e-09,6;UBERON:0001343,2.35e-07,2;UBERON:0004910,2.35e-07,2;UBERON:0004909,2.35e-07,2;UBERON:0005154,2.35e-07,2;UBERON:0005295,2.35e-07,2;UBERON:0005297,2.35e-07,2;UBERON:0005294,2.35e-07,2;UBERON:0010141,2.35e-07,2;UBERON:0005891,2.35e-07,2;UBERON:0002204,8.50e-07,32 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0.0797721589953364,0,0.174840804837995,0,0,0.699561878128147,0.315462165358238,0.411343300817216,0,0.0850432901510698,0.595745707205312,0,0.799962113967033,0.91763712426868,0,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0.117588707135705,0.251333182659351,0,0.144599356919912,0,3.07357014900077,1.76673214768315,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.342745537829186,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0.505157755894224,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.144649058581512,4.52373851817817,8.15858525728064,0,0,0,0,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0,0,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0,0.341741761595705,0,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0.295379054349154,0.504832249740738,0.228620419965,0.504130925684203,0.38983152295901,0.865906574762965,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.735374033800057,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,1.2673964994512,0.377252682772152,0.561849044819294,0.384150914429216,0.34461281373368,0,0.347652977834566,0.578727661391115,0.824171801606613,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0,0.543216455383447,1.68342681497322,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.935726433781634,0.644613162144895,0.765153328275374,0.661774257358546,0.463735671240843 | |||
|short_description=p@chr12:3873135..3873145,+ | |||
}} |
Revision as of 22:48, 12 September 2013
Short description: | p@chr12:3873135..3873145, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:3873135..3873145, + |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.78e-26 | 2 |
monopoietic cell | 8.72e-14 | 4 |
myeloid leukocyte | 8.72e-14 | 4 |
phagocyte | 8.72e-14 | 4 |
monocyte | 8.72e-14 | 4 |
macrophage | 8.72e-14 | 4 |
tissue-resident macrophage | 8.72e-14 | 4 |
macrophage dendritic cell progenitor | 8.72e-14 | 4 |
monoblast | 8.72e-14 | 4 |
promonocyte | 8.72e-14 | 4 |
defensive cell | 2.72e-08 | 7 |
granulocyte monocyte progenitor cell | 2.72e-08 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.