FFCP PHASE1:Mm9::chr11:96143962..96144035,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15416|HGNC=|MCL_coexpression_id=249|UniProt=P09632|association_with_transcript=-3bp_to_ENSMUST00000168043_5end|description=CAGE_peak_2_at_Hoxb8_5end|id=chr11:96143962..96144035,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!3.68e-15!21;UBERON:0001008!1.51e-10!17;UBERON:0006554!6.12e-10!16;UBERON:0002113!7.24e-10!14;UBERON:0003918!7.24e-10!14;UBERON:0005095!7.24e-10!14;UBERON:0007687!7.24e-10!14;UBERON:0003064!8.41e-09!14;UBERON:0002342!4.10e-08!10;UBERON:0005062!4.10e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.97e-19,21;UBERON:0002113,5.31e-12,14;UBERON:0003918,5.31e-12,14;UBERON:0011143,5.31e-12,14;UBERON:0005095,5.31e-12,14;UBERON:0007687,5.31e-12,14;UBERON:0001008,2.01e-10,19;UBERON:0003064,8.29e-10,14;UBERON:0006554,1.28e-09,18;UBERON:0002240,1.58e-08,6;UBERON:0005174,1.58e-08,6;UBERON:0001137,1.58e-08,6;UBERON:0002369,4.57e-08,7;UBERON:0006858,4.57e-08,7;UBERON:0001948,2.32e-07,5;UBERON:0002315,2.32e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,3.04130793658544,5.32285581268876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8489769880907,45.4989194360324,0,0,0,0,0,0,0,0,0,0,0,0,65.4075459751542,52.9622652572663,79.5925633674033,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.983110940922263,0.511290967734173,0,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0,0,0,1.37020655662872,0.258937883647172,6.67989625791711,5.55153045651635,10.6562917409249,5.5347719341454,5.12456977878917,3.99801604261396,4.39833069653864,0,1.01219549843938,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.81471491080253,2.98576729464223,12.6361379216837,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0,1.19420560091096,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,5.11891801284562,2.09013004674395,0.644337306610467,0.80673409849337,1.11189021922435,0.760902504450237,0.474529061544512,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,0,0.864552199498777,0.398282546508734,9.48339504765408,6.51216521875454,14.6520056375005,9.36796108088446,8.14600446104028,5.89140887078676,3.09859031908861,3.24742325555125,4.55296310739987,1.72756029490521,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.651859905768103,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0.8858587585951,0,0,0,0,0,0,0,0.551873492609465,15.5734072288158,9.02529986759964,0,0,6.31016438832513,3.51394869866975,9.04778270477756,0,0,0.283076530788832,1.61924280669958,3.21481443702443,1.18586333383957,0,0.709700426041343,1.42452482933804,0.325773918707152,3.62934270539578,0,0.971122544619926,0,0.377210159511796,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0.938686832254841,0,0.220528398054962,3.62749756471256,0.968786560175433,1.44751019827574,0.596861720015682,0.492422699235184,0,53.5879122810373,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,8.22473583310952,1.01659733563424,1.08005340821801,1.04544148007234,0.655087691238533,1.21377911746339,0.743881101528023,0.785267825952089,0.90730481304255,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.911430693907651,0,0.483168241652012,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,1.54551675225752,4.87974436173073,5.67770035228522,3.85863082342319,7.02200945649509,0,0,0,0,0,0,0,0,0,0,9.85979802049678,3.19219898720825,2.73173769206615,3.16038732188782,3.14419743941973,1.83843508450014,1.33348036680969,2.26638562962784,3.53011130550997,0.758091635291392,2.5347929989024,1.69763707247469,1.68554713445788,1.79270426733634,1.55075766180156,2.85776214769844,1.27472758539341,2.31491064556446,2.06042950401653,1.91358596174717,2.40008476669791,3.37204031702741,1.43061713968393,2.76158191601424,2.72917203204459,2.11536519729191,3.47563148458268,1.31534855718921,1.35804113845862,1.12228454331548,1.06771516311757,1.37906275325789,1.22769312950907,2.47898945897546,0.964533054905707,0.499621155875892,1.40358965067245,2.14871054048298,3.63447830930802,1.76473135295612,1.62307484934295|short_description=p2@Hoxb8}} | ||
|EntrezGene=15416 | |||
|HGNC= | |||
|MCL_coexpression_id=249 | |||
|UniProt=P09632 | |||
|association_with_transcript=-3bp_to_ENSMUST00000168043_5end | |||
|description=CAGE_peak_2_at_Hoxb8_5end | |||
|id=chr11:96143962..96144035,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!3.68e-15!21;UBERON:0001008!1.51e-10!17;UBERON:0006554!6.12e-10!16;UBERON:0002113!7.24e-10!14;UBERON:0003918!7.24e-10!14;UBERON:0005095!7.24e-10!14;UBERON:0007687!7.24e-10!14;UBERON:0003064!8.41e-09!14;UBERON:0002342!4.10e-08!10;UBERON:0005062!4.10e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.97e-19,21;UBERON:0002113,5.31e-12,14;UBERON:0003918,5.31e-12,14;UBERON:0011143,5.31e-12,14;UBERON:0005095,5.31e-12,14;UBERON:0007687,5.31e-12,14;UBERON:0001008,2.01e-10,19;UBERON:0003064,8.29e-10,14;UBERON:0006554,1.28e-09,18;UBERON:0002240,1.58e-08,6;UBERON:0005174,1.58e-08,6;UBERON:0001137,1.58e-08,6;UBERON:0002369,4.57e-08,7;UBERON:0006858,4.57e-08,7;UBERON:0001948,2.32e-07,5;UBERON:0002315,2.32e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,3.04130793658544,5.32285581268876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8489769880907,45.4989194360324,0,0,0,0,0,0,0,0,0,0,0,0,65.4075459751542,52.9622652572663,79.5925633674033,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.983110940922263,0.511290967734173,0,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0,0,0,1.37020655662872,0.258937883647172,6.67989625791711,5.55153045651635,10.6562917409249,5.5347719341454,5.12456977878917,3.99801604261396,4.39833069653864,0,1.01219549843938,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.81471491080253,2.98576729464223,12.6361379216837,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0,1.19420560091096,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,5.11891801284562,2.09013004674395,0.644337306610467,0.80673409849337,1.11189021922435,0.760902504450237,0.474529061544512,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,0,0.864552199498777,0.398282546508734,9.48339504765408,6.51216521875454,14.6520056375005,9.36796108088446,8.14600446104028,5.89140887078676,3.09859031908861,3.24742325555125,4.55296310739987,1.72756029490521,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.651859905768103,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0.8858587585951,0,0,0,0,0,0,0,0.551873492609465,15.5734072288158,9.02529986759964,0,0,6.31016438832513,3.51394869866975,9.04778270477756,0,0,0.283076530788832,1.61924280669958,3.21481443702443,1.18586333383957,0,0.709700426041343,1.42452482933804,0.325773918707152,3.62934270539578,0,0.971122544619926,0,0.377210159511796,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0.938686832254841,0,0.220528398054962,3.62749756471256,0.968786560175433,1.44751019827574,0.596861720015682,0.492422699235184,0,53.5879122810373,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,8.22473583310952,1.01659733563424,1.08005340821801,1.04544148007234,0.655087691238533,1.21377911746339,0.743881101528023,0.785267825952089,0.90730481304255,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.911430693907651,0,0.483168241652012,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,1.54551675225752,4.87974436173073,5.67770035228522,3.85863082342319,7.02200945649509,0,0,0,0,0,0,0,0,0,0,9.85979802049678,3.19219898720825,2.73173769206615,3.16038732188782,3.14419743941973,1.83843508450014,1.33348036680969,2.26638562962784,3.53011130550997,0.758091635291392,2.5347929989024,1.69763707247469,1.68554713445788,1.79270426733634,1.55075766180156,2.85776214769844,1.27472758539341,2.31491064556446,2.06042950401653,1.91358596174717,2.40008476669791,3.37204031702741,1.43061713968393,2.76158191601424,2.72917203204459,2.11536519729191,3.47563148458268,1.31534855718921,1.35804113845862,1.12228454331548,1.06771516311757,1.37906275325789,1.22769312950907,2.47898945897546,0.964533054905707,0.499621155875892,1.40358965067245,2.14871054048298,3.63447830930802,1.76473135295612,1.62307484934295 | |||
|short_description=p2@Hoxb8 | |||
}} |
Revision as of 21:38, 12 September 2013
Short description: | p2@Hoxb8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hoxb8_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | -3bp_to_ENSMUST00000168043_5end |
EntrezGene: | Hoxb8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.97e-19 | 21 |
kidney | 5.31e-12 | 14 |
kidney mesenchyme | 5.31e-12 | 14 |
upper urinary tract | 5.31e-12 | 14 |
kidney rudiment | 5.31e-12 | 14 |
kidney field | 5.31e-12 | 14 |
renal system | 2.01e-10 | 19 |
intermediate mesoderm | 8.29e-10 | 14 |
urinary system structure | 1.28e-09 | 18 |
spinal cord | 1.58e-08 | 6 |
dorsal region element | 1.58e-08 | 6 |
dorsum | 1.58e-08 | 6 |
adrenal gland | 4.57e-08 | 7 |
adrenal/interrenal gland | 4.57e-08 | 7 |
regional part of spinal cord | 2.32e-07 | 5 |
gray matter of spinal cord | 2.32e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.