FFCP PHASE1:Mm9::chr11:69414255..69414260,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=303|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69414255..69414260,-|id=chr11:69414255..69414260,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,2.57e-11,3;CL:0002319,3.38e-11,43;CL:0000221,6.91e-11,44;CL:0000133,6.91e-11,44;CL:0000117,1.12e-10,23;CL:0000337,1.12e-10,23;CL:0002614,1.96e-10,3;CL:0000878,1.27e-08,2;CL:0000129,1.27e-08,2;CL:0002605,1.42e-07,2;CL:0002604,1.42e-07,2;CL:0002453,2.63e-07,8;CL:0000540,5.19e-07,33;CL:0000047,5.19e-07,33;CL:0000031,5.19e-07,33;CL:0000404,5.19e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.80e-21!73;UBERON:0005743!1.80e-21!73;UBERON:0001049!3.55e-21!52;UBERON:0005068!3.55e-21!52;UBERON:0006241!3.55e-21!52;UBERON:0007135!3.55e-21!52;UBERON:0000073!1.87e-20!75;UBERON:0001016!1.87e-20!75;UBERON:0002616!2.92e-20!49;UBERON:0000955!1.36e-19!50;UBERON:0006238!1.36e-19!50;UBERON:0000033!3.28e-19!63;UBERON:0002346!1.57e-18!71;UBERON:0003075!1.57e-18!71;UBERON:0007284!1.57e-18!71;UBERON:0004121!3.24e-17!102;UBERON:0000924!3.24e-17!102;UBERON:0006601!3.24e-17!102;UBERON:0003056!1.88e-14!49;UBERON:0003080!1.39e-13!40;UBERON:0002780!7.85e-13!39;UBERON:0001890!7.85e-13!39;UBERON:0006240!7.85e-13!39;UBERON:0002020!9.79e-13!34;UBERON:0007811!2.37e-10!86;UBERON:0002791!4.38e-10!29;UBERON:0003528!4.38e-10!29;UBERON:0001893!4.38e-10!29;UBERON:0002021!7.25e-09!10;UBERON:0000411!7.25e-09!10;UBERON:0001950!7.25e-09!10;UBERON:0003076!9.99e-09!12;UBERON:0003057!9.99e-09!12;UBERON:0000153!2.16e-08!94;UBERON:0002298!2.74e-07!6;UBERON:0000025!5.26e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.41e-30,54;UBERON:0001017,5.94e-26,73;UBERON:0001016,3.77e-25,75;UBERON:0001049,6.40e-23,52;UBERON:0005068,6.40e-23,52;UBERON:0006241,6.40e-23,52;UBERON:0007135,6.40e-23,52;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0002346,6.57e-20,64;UBERON:0003075,6.57e-20,64;UBERON:0007284,6.57e-20,64;UBERON:0002020,1.08e-19,34;UBERON:0002616,1.73e-18,46;UBERON:0000955,5.04e-18,47;UBERON:0006238,5.04e-18,47;UBERON:0010371,5.65e-17,73;UBERON:0002021,2.93e-16,10;UBERON:0000411,2.93e-16,10;UBERON:0001950,2.93e-16,10;UBERON:0002619,5.29e-15,17;UBERON:0003528,1.09e-14,29;UBERON:0002791,1.09e-14,29;UBERON:0001893,1.09e-14,29;UBERON:0003076,1.06e-13,12;UBERON:0003057,1.06e-13,12;UBERON:0010314,1.18e-12,92;UBERON:0002780,2.48e-12,39;UBERON:0001890,2.48e-12,39;UBERON:0006240,2.48e-12,39;UBERON:0003080,5.80e-12,40;UBERON:0000956,7.15e-12,21;UBERON:0001869,7.15e-12,21;UBERON:0000203,7.15e-12,21;UBERON:0004684,2.57e-11,3;UBERON:0002275,2.57e-11,3;UBERON:0003056,6.90e-11,49;UBERON:0002038,1.96e-10,3;UBERON:0009663,1.96e-10,3;UBERON:0009661,1.96e-10,3;UBERON:0000125,1.96e-10,3;UBERON:0002308,1.96e-10,3;UBERON:0004733,6.97e-10,6;UBERON:0004732,6.97e-10,6;UBERON:0002028,6.97e-10,6;UBERON:0007277,6.97e-10,6;UBERON:0000025,2.21e-08,114;UBERON:0001896,3.14e-08,2;UBERON:0002298,3.14e-08,2;UBERON:0005290,3.14e-08,2;UBERON:0010096,3.14e-08,2;UBERON:0002950,6.06e-08,4;UBERON:0001891,6.06e-08,4;UBERON:0009616,6.06e-08,4;UBERON:0010286,6.06e-08,4;UBERON:0004111,1.41e-07,122;UBERON:0011216,4.82e-07,194;UBERON:0001948,9.79e-07,5;UBERON:0002315,9.79e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.5378032791413,1.1665793944457,0.55994568650145,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,2.39680088414724,3.07374644257244,0.103689612308478,0,0,0.571301968807607,1.54607978666129,0,0,0,3.30347642998166,1.0214987046815,2.15049146558741,0.263772575460388,0.457438218012048,0,1.3959149950069,1.12552522006336,1.37518422999129,1.76777151284201,1.28134512719193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,2.04946557908083,1.67557365450764,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,1.66230435647648,0.486723789203273,0,0,0,0.420883711772948,0,0,0,0,0.272145996605311,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,1.76605648986571,1.87538698547525,0,0.504941854408746,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0,0.32977250588296,0,0,0,0,0,0.927126510052548,0,0.206386867963223,0,0.376736914009382,0.27338845544205,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,2.86447756719698,2.40594455281163,0.685082519770642,1.5107877947794,0,1.35096360967266,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p@chr11:69414255..69414260,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69414255..69414260,- | |||
|id=chr11:69414255..69414260,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.57e-11,3;CL:0002319,3.38e-11,43;CL:0000221,6.91e-11,44;CL:0000133,6.91e-11,44;CL:0000117,1.12e-10,23;CL:0000337,1.12e-10,23;CL:0002614,1.96e-10,3;CL:0000878,1.27e-08,2;CL:0000129,1.27e-08,2;CL:0002605,1.42e-07,2;CL:0002604,1.42e-07,2;CL:0002453,2.63e-07,8;CL:0000540,5.19e-07,33;CL:0000047,5.19e-07,33;CL:0000031,5.19e-07,33;CL:0000404,5.19e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.80e-21!73;UBERON:0005743!1.80e-21!73;UBERON:0001049!3.55e-21!52;UBERON:0005068!3.55e-21!52;UBERON:0006241!3.55e-21!52;UBERON:0007135!3.55e-21!52;UBERON:0000073!1.87e-20!75;UBERON:0001016!1.87e-20!75;UBERON:0002616!2.92e-20!49;UBERON:0000955!1.36e-19!50;UBERON:0006238!1.36e-19!50;UBERON:0000033!3.28e-19!63;UBERON:0002346!1.57e-18!71;UBERON:0003075!1.57e-18!71;UBERON:0007284!1.57e-18!71;UBERON:0004121!3.24e-17!102;UBERON:0000924!3.24e-17!102;UBERON:0006601!3.24e-17!102;UBERON:0003056!1.88e-14!49;UBERON:0003080!1.39e-13!40;UBERON:0002780!7.85e-13!39;UBERON:0001890!7.85e-13!39;UBERON:0006240!7.85e-13!39;UBERON:0002020!9.79e-13!34;UBERON:0007811!2.37e-10!86;UBERON:0002791!4.38e-10!29;UBERON:0003528!4.38e-10!29;UBERON:0001893!4.38e-10!29;UBERON:0002021!7.25e-09!10;UBERON:0000411!7.25e-09!10;UBERON:0001950!7.25e-09!10;UBERON:0003076!9.99e-09!12;UBERON:0003057!9.99e-09!12;UBERON:0000153!2.16e-08!94;UBERON:0002298!2.74e-07!6;UBERON:0000025!5.26e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.41e-30,54;UBERON:0001017,5.94e-26,73;UBERON:0001016,3.77e-25,75;UBERON:0001049,6.40e-23,52;UBERON:0005068,6.40e-23,52;UBERON:0006241,6.40e-23,52;UBERON:0007135,6.40e-23,52;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0002346,6.57e-20,64;UBERON:0003075,6.57e-20,64;UBERON:0007284,6.57e-20,64;UBERON:0002020,1.08e-19,34;UBERON:0002616,1.73e-18,46;UBERON:0000955,5.04e-18,47;UBERON:0006238,5.04e-18,47;UBERON:0010371,5.65e-17,73;UBERON:0002021,2.93e-16,10;UBERON:0000411,2.93e-16,10;UBERON:0001950,2.93e-16,10;UBERON:0002619,5.29e-15,17;UBERON:0003528,1.09e-14,29;UBERON:0002791,1.09e-14,29;UBERON:0001893,1.09e-14,29;UBERON:0003076,1.06e-13,12;UBERON:0003057,1.06e-13,12;UBERON:0010314,1.18e-12,92;UBERON:0002780,2.48e-12,39;UBERON:0001890,2.48e-12,39;UBERON:0006240,2.48e-12,39;UBERON:0003080,5.80e-12,40;UBERON:0000956,7.15e-12,21;UBERON:0001869,7.15e-12,21;UBERON:0000203,7.15e-12,21;UBERON:0004684,2.57e-11,3;UBERON:0002275,2.57e-11,3;UBERON:0003056,6.90e-11,49;UBERON:0002038,1.96e-10,3;UBERON:0009663,1.96e-10,3;UBERON:0009661,1.96e-10,3;UBERON:0000125,1.96e-10,3;UBERON:0002308,1.96e-10,3;UBERON:0004733,6.97e-10,6;UBERON:0004732,6.97e-10,6;UBERON:0002028,6.97e-10,6;UBERON:0007277,6.97e-10,6;UBERON:0000025,2.21e-08,114;UBERON:0001896,3.14e-08,2;UBERON:0002298,3.14e-08,2;UBERON:0005290,3.14e-08,2;UBERON:0010096,3.14e-08,2;UBERON:0002950,6.06e-08,4;UBERON:0001891,6.06e-08,4;UBERON:0009616,6.06e-08,4;UBERON:0010286,6.06e-08,4;UBERON:0004111,1.41e-07,122;UBERON:0011216,4.82e-07,194;UBERON:0001948,9.79e-07,5;UBERON:0002315,9.79e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.5378032791413,1.1665793944457,0.55994568650145,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,2.39680088414724,3.07374644257244,0.103689612308478,0,0,0.571301968807607,1.54607978666129,0,0,0,3.30347642998166,1.0214987046815,2.15049146558741,0.263772575460388,0.457438218012048,0,1.3959149950069,1.12552522006336,1.37518422999129,1.76777151284201,1.28134512719193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,2.04946557908083,1.67557365450764,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,1.66230435647648,0.486723789203273,0,0,0,0.420883711772948,0,0,0,0,0.272145996605311,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,1.76605648986571,1.87538698547525,0,0.504941854408746,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0,0.32977250588296,0,0,0,0,0,0.927126510052548,0,0.206386867963223,0,0.376736914009382,0.27338845544205,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,2.86447756719698,2.40594455281163,0.685082519770642,1.5107877947794,0,1.35096360967266,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr11:69414255..69414260,- | |||
}} |
Revision as of 20:36, 12 September 2013
Short description: | p@chr11:69414255..69414260, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69414255..69414260, - |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.57e-11 | 3 |
neural cell | 3.38e-11 | 43 |
ectodermal cell | 6.91e-11 | 44 |
neurectodermal cell | 6.91e-11 | 44 |
CNS neuron (sensu Vertebrata) | 1.12e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-10 | 23 |
neuron of the substantia nigra | 1.96e-10 | 3 |
central nervous system macrophage | 1.27e-08 | 2 |
microglial cell | 1.27e-08 | 2 |
astrocyte of the cerebral cortex | 1.42e-07 | 2 |
astrocyte of the hippocampus | 1.42e-07 | 2 |
oligodendrocyte precursor cell | 2.63e-07 | 8 |
neuron | 5.19e-07 | 33 |
neuronal stem cell | 5.19e-07 | 33 |
neuroblast | 5.19e-07 | 33 |
electrically signaling cell | 5.19e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.