FFCP PHASE1:Mm9::chr11:14086132..14086136,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:14086132..14086136,+|id=chr11:14086132..14086136,+|ontology_enrichment_celltype=CL:0000239!2.96e-13!6;CL:0000677!2.96e-13!6;CL:0000212!2.96e-13!6;CL:0000584!2.96e-13!6;CL:0000075!2.57e-11!7;CL:0000473!1.81e-09!3;CL:0000627!1.81e-09!3;CL:0000682!1.81e-09!3;CL:0002563!9.99e-09!9;CL:0002251!9.99e-09!9;CL:0000066!9.11e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,3.16e-17,6;CL:0000677,3.16e-17,6;CL:0000584,3.16e-17,6;CL:0000075,9.59e-15,7;CL:0000682,4.61e-12,3;CL:0002563,1.99e-11,9;CL:0002251,1.99e-11,9;CL:0000066,2.83e-09,25;CL:0002076,9.17e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.76e-30!43;UBERON:0000344!4.98e-24!15;UBERON:0005409!9.44e-21!59;UBERON:0001242!1.55e-18!13;UBERON:0000060!1.55e-18!13;UBERON:0001262!1.55e-18!13;UBERON:0004786!1.55e-18!13;UBERON:0004923!3.46e-14!24;UBERON:0000331!3.01e-10!3;UBERON:0002116!3.01e-10!3;UBERON:0001204!3.01e-10!3;UBERON:0001168!3.01e-10!3;UBERON:0001007!3.85e-09!128;UBERON:0001555!3.85e-09!128;UBERON:0007026!3.85e-09!128;UBERON:0004119!6.34e-09!130;UBERON:0000925!6.34e-09!130;UBERON:0006595!6.34e-09!130;UBERON:0003350!9.99e-09!9;UBERON:0004808!9.99e-09!9;UBERON:0001277!9.99e-09!9;UBERON:0002108!2.01e-08!16;UBERON:0001962!1.33e-07!2;UBERON:0001961!1.33e-07!2;UBERON:0001744!1.33e-07!2;UBERON:0004921!2.71e-07!126;UBERON:0004185!2.71e-07!126;UBERON:0001155!3.62e-07!2;UBERON:0000059!3.62e-07!2;UBERON:0000485!4.48e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.56e-32,15;UBERON:0000160,2.96e-27,31;UBERON:0001242,1.45e-24,13;UBERON:0001262,1.45e-24,13;UBERON:0004786,1.45e-24,13;UBERON:0004923,2.85e-19,24;UBERON:0005409,4.25e-17,47;UBERON:0000331,4.25e-13,3;UBERON:0002116,4.25e-13,3;UBERON:0001204,4.25e-13,3;UBERON:0001168,4.25e-13,3;UBERON:0003350,1.99e-11,9;UBERON:0004808,1.99e-11,9;UBERON:0001277,1.99e-11,9;UBERON:0002108,6.01e-10,4;UBERON:0001962,1.38e-09,2;UBERON:0001961,1.38e-09,2;UBERON:0001744,1.38e-09,2;UBERON:0000485,2.60e-09,11;UBERON:0001155,5.17e-09,2;UBERON:0000059,5.17e-09,2;UBERON:0001007,2.25e-07,116;UBERON:0001555,2.25e-07,116;UBERON:0007026,2.25e-07,116;UBERON:0004119,3.38e-07,118;UBERON:0000925,3.38e-07,118;UBERON:0006595,3.38e-07,118|phase1_expression=0,1.39590163055744,3.18499467572675,22.9872800593191,40.5725541256541,0,30.6032559180139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.8390604263824,33.4937550358068,1.72269589234506,2.15380998079537,1.50829862880122,289.405667832057,1.76421090831952,9.3126814475228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,61.6169820326058,0,0,0,0,0,0,6.16887780007865,0.329397909448022,0.251335208800269,0,0,5.39291645192533,1.08069024937347,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0.948110273807448,20.0295356292498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:14086132..14086136,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:14086132..14086136,+ | |||
|id=chr11:14086132..14086136,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.96e-13!6;CL:0000677!2.96e-13!6;CL:0000212!2.96e-13!6;CL:0000584!2.96e-13!6;CL:0000075!2.57e-11!7;CL:0000473!1.81e-09!3;CL:0000627!1.81e-09!3;CL:0000682!1.81e-09!3;CL:0002563!9.99e-09!9;CL:0002251!9.99e-09!9;CL:0000066!9.11e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.16e-17,6;CL:0000677,3.16e-17,6;CL:0000584,3.16e-17,6;CL:0000075,9.59e-15,7;CL:0000682,4.61e-12,3;CL:0002563,1.99e-11,9;CL:0002251,1.99e-11,9;CL:0000066,2.83e-09,25;CL:0002076,9.17e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.76e-30!43;UBERON:0000344!4.98e-24!15;UBERON:0005409!9.44e-21!59;UBERON:0001242!1.55e-18!13;UBERON:0000060!1.55e-18!13;UBERON:0001262!1.55e-18!13;UBERON:0004786!1.55e-18!13;UBERON:0004923!3.46e-14!24;UBERON:0000331!3.01e-10!3;UBERON:0002116!3.01e-10!3;UBERON:0001204!3.01e-10!3;UBERON:0001168!3.01e-10!3;UBERON:0001007!3.85e-09!128;UBERON:0001555!3.85e-09!128;UBERON:0007026!3.85e-09!128;UBERON:0004119!6.34e-09!130;UBERON:0000925!6.34e-09!130;UBERON:0006595!6.34e-09!130;UBERON:0003350!9.99e-09!9;UBERON:0004808!9.99e-09!9;UBERON:0001277!9.99e-09!9;UBERON:0002108!2.01e-08!16;UBERON:0001962!1.33e-07!2;UBERON:0001961!1.33e-07!2;UBERON:0001744!1.33e-07!2;UBERON:0004921!2.71e-07!126;UBERON:0004185!2.71e-07!126;UBERON:0001155!3.62e-07!2;UBERON:0000059!3.62e-07!2;UBERON:0000485!4.48e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.56e-32,15;UBERON:0000160,2.96e-27,31;UBERON:0001242,1.45e-24,13;UBERON:0001262,1.45e-24,13;UBERON:0004786,1.45e-24,13;UBERON:0004923,2.85e-19,24;UBERON:0005409,4.25e-17,47;UBERON:0000331,4.25e-13,3;UBERON:0002116,4.25e-13,3;UBERON:0001204,4.25e-13,3;UBERON:0001168,4.25e-13,3;UBERON:0003350,1.99e-11,9;UBERON:0004808,1.99e-11,9;UBERON:0001277,1.99e-11,9;UBERON:0002108,6.01e-10,4;UBERON:0001962,1.38e-09,2;UBERON:0001961,1.38e-09,2;UBERON:0001744,1.38e-09,2;UBERON:0000485,2.60e-09,11;UBERON:0001155,5.17e-09,2;UBERON:0000059,5.17e-09,2;UBERON:0001007,2.25e-07,116;UBERON:0001555,2.25e-07,116;UBERON:0007026,2.25e-07,116;UBERON:0004119,3.38e-07,118;UBERON:0000925,3.38e-07,118;UBERON:0006595,3.38e-07,118 | |||
|phase1_expression=0,1.39590163055744,3.18499467572675,22.9872800593191,40.5725541256541,0,30.6032559180139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.8390604263824,33.4937550358068,1.72269589234506,2.15380998079537,1.50829862880122,289.405667832057,1.76421090831952,9.3126814475228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,61.6169820326058,0,0,0,0,0,0,6.16887780007865,0.329397909448022,0.251335208800269,0,0,5.39291645192533,1.08069024937347,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0.948110273807448,20.0295356292498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:14086132..14086136,+ | |||
}} |
Revision as of 19:11, 12 September 2013
Short description: | p@chr11:14086132..14086136, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:14086132..14086136, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.16e-17 | 6 |
gut absorptive cell | 3.16e-17 | 6 |
enterocyte | 3.16e-17 | 6 |
columnar/cuboidal epithelial cell | 9.59e-15 | 7 |
M cell of gut | 4.61e-12 | 3 |
intestinal epithelial cell | 1.99e-11 | 9 |
epithelial cell of alimentary canal | 1.99e-11 | 9 |
epithelial cell | 2.83e-09 | 25 |
endo-epithelial cell | 9.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.56e-32 | 15 |
intestine | 2.96e-27 | 31 |
intestinal mucosa | 1.45e-24 | 13 |
wall of intestine | 1.45e-24 | 13 |
gastrointestinal system mucosa | 1.45e-24 | 13 |
organ component layer | 2.85e-19 | 24 |
gastrointestinal system | 4.25e-17 | 47 |
ileal mucosa | 4.25e-13 | 3 |
ileum | 4.25e-13 | 3 |
mucosa of small intestine | 4.25e-13 | 3 |
wall of small intestine | 4.25e-13 | 3 |
epithelium of mucosa | 1.99e-11 | 9 |
gastrointestinal system epithelium | 1.99e-11 | 9 |
intestinal epithelium | 1.99e-11 | 9 |
small intestine | 6.01e-10 | 4 |
gut-associated lymphoid tissue | 1.38e-09 | 2 |
mucosa-associated lymphoid tissue | 1.38e-09 | 2 |
lymphoid tissue | 1.38e-09 | 2 |
simple columnar epithelium | 2.60e-09 | 11 |
colon | 5.17e-09 | 2 |
large intestine | 5.17e-09 | 2 |
digestive system | 2.25e-07 | 116 |
digestive tract | 2.25e-07 | 116 |
primitive gut | 2.25e-07 | 116 |
endoderm-derived structure | 3.38e-07 | 118 |
endoderm | 3.38e-07 | 118 |
presumptive endoderm | 3.38e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.