FFCP PHASE1:Mm9::chr10:82125371..82125406,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:82125371..82125406,-|id=chr10:82125371..82125406,-|ontology_enrichment_celltype=CL:0000084!5.19e-08!11;CL:0000827!5.19e-08!11;CL:0000838!3.75e-07!12|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.29e-15!23;UBERON:0000974!1.29e-15!23;UBERON:0004807!1.29e-15!23;UBERON:0005058!1.29e-15!23;UBERON:0003351!1.29e-15!23;UBERON:0009113!1.29e-15!23;UBERON:0003295!1.29e-15!23;UBERON:0009722!1.29e-15!23;UBERON:0005562!1.29e-15!23;UBERON:0007690!1.29e-15!23;UBERON:0006562!1.05e-14!24;UBERON:0003408!1.05e-14!24;UBERON:0001557!1.05e-14!24;UBERON:0001042!1.05e-14!24;UBERON:0008814!1.05e-14!24;UBERON:0009145!1.05e-14!24;UBERON:0007811!1.81e-13!86;UBERON:0000956!1.21e-12!21;UBERON:0001869!1.21e-12!21;UBERON:0000203!1.21e-12!21;UBERON:0004177!1.93e-12!29;UBERON:0000072!2.16e-12!27;UBERON:0000153!4.04e-12!94;UBERON:0000063!1.20e-10!35;UBERON:0002390!1.54e-10!45;UBERON:0003061!1.54e-10!45;UBERON:0002193!2.06e-10!48;UBERON:0000064!2.37e-10!99;UBERON:0002619!3.44e-09!17;UBERON:0002791!9.90e-09!29;UBERON:0003528!9.90e-09!29;UBERON:0001893!9.90e-09!29;UBERON:0002020!1.47e-07!34;UBERON:0000065!5.48e-07!41;UBERON:0002021!8.25e-07!10;UBERON:0000411!8.25e-07!10;UBERON:0001950!8.25e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.59e-28,23;UBERON:0000974,1.59e-28,23;UBERON:0004807,1.59e-28,23;UBERON:0005058,1.59e-28,23;UBERON:0003351,1.59e-28,23;UBERON:0009113,1.59e-28,23;UBERON:0003295,1.59e-28,23;UBERON:0009722,1.59e-28,23;UBERON:0005562,1.59e-28,23;UBERON:0007690,1.59e-28,23;UBERON:0006562,3.20e-27,24;UBERON:0003408,3.20e-27,24;UBERON:0001557,3.20e-27,24;UBERON:0001042,3.20e-27,24;UBERON:0008814,3.20e-27,24;UBERON:0009145,3.20e-27,24;UBERON:0000072,6.85e-24,27;UBERON:0004177,4.72e-22,29;UBERON:0005057,4.72e-22,29;UBERON:0000077,8.50e-18,35;UBERON:0007811,3.17e-17,36;UBERON:0002390,2.76e-15,45;UBERON:0003061,2.76e-15,45;UBERON:0000065,8.73e-15,41;UBERON:0001004,2.29e-14,42;UBERON:0002193,3.83e-14,48;UBERON:0002405,3.83e-14,48;UBERON:0000153,5.73e-14,43;UBERON:0003929,2.59e-10,55;UBERON:0000490,2.03e-09,66;UBERON:0002368,3.18e-09,60;UBERON:0002530,2.66e-08,65;UBERON:0005911,1.16e-07,69;UBERON:0000949,3.15e-07,72|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.281577444303333,0,0.68487187290202,0,3.76641605848653,0.34968160967599,0,0.202475267389826,0,0,0.274228867211478,0,0,0.496454756004426,3.13439746966722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725827286159344,0.675029691658453,1.05162480675691,0,0,0.367472397644862,0,0.919218786610021,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,0.628340120440365,0,0.718890747035522,0.599902730993408,0.127070227073065,0,0,0,0.347648640384553,0,0,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0.772043721344145,0.568326998791185,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,1.23485534855141,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0,1.01987057996313,1.11961161858926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6404448251271,0.202725215290164,1.33524244314275,1.68897069871134,2.32734704367726,4.17230845040656,3.12508168751919,2.51072196196781,4.34155734777035,5.25826965919499,4.03304740547362,4.38560463328886,5.38786313185845,9.93453668543336,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.789209134313529,0.135804113845862,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p@chr10:82125371..82125406,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:82125371..82125406,- | |||
|id=chr10:82125371..82125406,- | |||
|ontology_enrichment_celltype=CL:0000084!5.19e-08!11;CL:0000827!5.19e-08!11;CL:0000838!3.75e-07!12 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.29e-15!23;UBERON:0000974!1.29e-15!23;UBERON:0004807!1.29e-15!23;UBERON:0005058!1.29e-15!23;UBERON:0003351!1.29e-15!23;UBERON:0009113!1.29e-15!23;UBERON:0003295!1.29e-15!23;UBERON:0009722!1.29e-15!23;UBERON:0005562!1.29e-15!23;UBERON:0007690!1.29e-15!23;UBERON:0006562!1.05e-14!24;UBERON:0003408!1.05e-14!24;UBERON:0001557!1.05e-14!24;UBERON:0001042!1.05e-14!24;UBERON:0008814!1.05e-14!24;UBERON:0009145!1.05e-14!24;UBERON:0007811!1.81e-13!86;UBERON:0000956!1.21e-12!21;UBERON:0001869!1.21e-12!21;UBERON:0000203!1.21e-12!21;UBERON:0004177!1.93e-12!29;UBERON:0000072!2.16e-12!27;UBERON:0000153!4.04e-12!94;UBERON:0000063!1.20e-10!35;UBERON:0002390!1.54e-10!45;UBERON:0003061!1.54e-10!45;UBERON:0002193!2.06e-10!48;UBERON:0000064!2.37e-10!99;UBERON:0002619!3.44e-09!17;UBERON:0002791!9.90e-09!29;UBERON:0003528!9.90e-09!29;UBERON:0001893!9.90e-09!29;UBERON:0002020!1.47e-07!34;UBERON:0000065!5.48e-07!41;UBERON:0002021!8.25e-07!10;UBERON:0000411!8.25e-07!10;UBERON:0001950!8.25e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.59e-28,23;UBERON:0000974,1.59e-28,23;UBERON:0004807,1.59e-28,23;UBERON:0005058,1.59e-28,23;UBERON:0003351,1.59e-28,23;UBERON:0009113,1.59e-28,23;UBERON:0003295,1.59e-28,23;UBERON:0009722,1.59e-28,23;UBERON:0005562,1.59e-28,23;UBERON:0007690,1.59e-28,23;UBERON:0006562,3.20e-27,24;UBERON:0003408,3.20e-27,24;UBERON:0001557,3.20e-27,24;UBERON:0001042,3.20e-27,24;UBERON:0008814,3.20e-27,24;UBERON:0009145,3.20e-27,24;UBERON:0000072,6.85e-24,27;UBERON:0004177,4.72e-22,29;UBERON:0005057,4.72e-22,29;UBERON:0000077,8.50e-18,35;UBERON:0007811,3.17e-17,36;UBERON:0002390,2.76e-15,45;UBERON:0003061,2.76e-15,45;UBERON:0000065,8.73e-15,41;UBERON:0001004,2.29e-14,42;UBERON:0002193,3.83e-14,48;UBERON:0002405,3.83e-14,48;UBERON:0000153,5.73e-14,43;UBERON:0003929,2.59e-10,55;UBERON:0000490,2.03e-09,66;UBERON:0002368,3.18e-09,60;UBERON:0002530,2.66e-08,65;UBERON:0005911,1.16e-07,69;UBERON:0000949,3.15e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.281577444303333,0,0.68487187290202,0,3.76641605848653,0.34968160967599,0,0.202475267389826,0,0,0.274228867211478,0,0,0.496454756004426,3.13439746966722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725827286159344,0.675029691658453,1.05162480675691,0,0,0.367472397644862,0,0.919218786610021,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,0.628340120440365,0,0.718890747035522,0.599902730993408,0.127070227073065,0,0,0,0.347648640384553,0,0,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0.772043721344145,0.568326998791185,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,1.23485534855141,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0,1.01987057996313,1.11961161858926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6404448251271,0.202725215290164,1.33524244314275,1.68897069871134,2.32734704367726,4.17230845040656,3.12508168751919,2.51072196196781,4.34155734777035,5.25826965919499,4.03304740547362,4.38560463328886,5.38786313185845,9.93453668543336,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.789209134313529,0.135804113845862,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr10:82125371..82125406,- | |||
}} |
Revision as of 17:45, 12 September 2013
Short description: | p@chr10:82125371..82125406, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:82125371..82125406, - |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.59e-28 | 23 |
neck | 1.59e-28 | 23 |
respiratory system epithelium | 1.59e-28 | 23 |
hemolymphoid system gland | 1.59e-28 | 23 |
pharyngeal epithelium | 1.59e-28 | 23 |
thymic region | 1.59e-28 | 23 |
pharyngeal gland | 1.59e-28 | 23 |
entire pharyngeal arch endoderm | 1.59e-28 | 23 |
thymus primordium | 1.59e-28 | 23 |
early pharyngeal endoderm | 1.59e-28 | 23 |
pharynx | 3.20e-27 | 24 |
gland of gut | 3.20e-27 | 24 |
upper respiratory tract | 3.20e-27 | 24 |
chordate pharynx | 3.20e-27 | 24 |
pharyngeal arch system | 3.20e-27 | 24 |
pharyngeal region of foregut | 3.20e-27 | 24 |
segment of respiratory tract | 6.85e-24 | 27 |
hemopoietic organ | 4.72e-22 | 29 |
immune organ | 4.72e-22 | 29 |
mixed endoderm/mesoderm-derived structure | 8.50e-18 | 35 |
craniocervical region | 3.17e-17 | 36 |
hematopoietic system | 2.76e-15 | 45 |
blood island | 2.76e-15 | 45 |
respiratory tract | 8.73e-15 | 41 |
respiratory system | 2.29e-14 | 42 |
hemolymphoid system | 3.83e-14 | 48 |
immune system | 3.83e-14 | 48 |
anterior region of body | 5.73e-14 | 43 |
gut epithelium | 2.59e-10 | 55 |
unilaminar epithelium | 2.03e-09 | 66 |
endocrine gland | 3.18e-09 | 60 |
gland | 2.66e-08 | 65 |
endo-epithelium | 1.16e-07 | 69 |
endocrine system | 3.15e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.