FFCP PHASE1:Mm9::chr10:19438492..19438529,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=686|UniProt=|association_with_transcript=0bp_to_uc007enj.1_5end|description=CAGE_peak_1_at_uc007enj.1_5end|id=chr10:19438492..19438529,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.77e-17!23;UBERON:0000974!1.77e-17!23;UBERON:0004807!1.77e-17!23;UBERON:0005058!1.77e-17!23;UBERON:0003351!1.77e-17!23;UBERON:0009113!1.77e-17!23;UBERON:0003295!1.77e-17!23;UBERON:0009722!1.77e-17!23;UBERON:0005562!1.77e-17!23;UBERON:0007690!1.77e-17!23;UBERON:0004177!4.19e-17!29;UBERON:0006562!1.33e-16!24;UBERON:0003408!1.33e-16!24;UBERON:0001557!1.33e-16!24;UBERON:0001042!1.33e-16!24;UBERON:0008814!1.33e-16!24;UBERON:0009145!1.33e-16!24;UBERON:0000072!2.28e-14!27;UBERON:0002390!3.99e-14!45;UBERON:0003061!3.99e-14!45;UBERON:0002193!6.02e-13!48;UBERON:0005057!1.79e-10!51;UBERON:0000063!2.67e-10!35;UBERON:0002405!1.82e-09!70;UBERON:0002368!2.48e-09!60;UBERON:0002530!2.48e-09!65;UBERON:0000065!2.63e-08!41;UBERON:0001004!4.95e-08!42;UBERON:0000949!5.56e-08!72;UBERON:0003081!2.47e-07!88;UBERON:0003929!2.89e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.86e-24,23;UBERON:0000974,1.86e-24,23;UBERON:0004807,1.86e-24,23;UBERON:0005058,1.86e-24,23;UBERON:0003351,1.86e-24,23;UBERON:0009113,1.86e-24,23;UBERON:0003295,1.86e-24,23;UBERON:0009722,1.86e-24,23;UBERON:0005562,1.86e-24,23;UBERON:0007690,1.86e-24,23;UBERON:0006562,2.15e-23,24;UBERON:0003408,2.15e-23,24;UBERON:0001557,2.15e-23,24;UBERON:0001042,2.15e-23,24;UBERON:0008814,2.15e-23,24;UBERON:0009145,2.15e-23,24;UBERON:0000072,1.13e-20,27;UBERON:0004177,3.58e-19,29;UBERON:0005057,3.58e-19,29;UBERON:0000077,1.08e-15,35;UBERON:0007811,3.17e-15,36;UBERON:0000065,3.16e-13,41;UBERON:0001004,6.97e-13,42;UBERON:0000153,1.48e-12,43;UBERON:0002390,6.05e-12,45;UBERON:0003061,6.05e-12,45;UBERON:0002193,4.01e-11,48;UBERON:0002405,4.01e-11,48;UBERON:0003929,1.50e-09,55;UBERON:0002368,1.19e-08,60;UBERON:0002530,6.88e-08,65;UBERON:0000490,9.47e-08,66;UBERON:0005911,2.34e-07,69;UBERON:0000949,5.36e-07,72|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,11.3191684369009,5.22399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.479260498023681,0,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0.136694227721025,0,1.35982743995084,1.39951452323658,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,3.04087822935246,6.88163413004343,4.15746633528944,3.04345382634718,1.98681354781265,1.80293174279953,2.21534290761866,1.31256384932592,1.21930890648,0.504130925684203,0.292373642219257,1.34696578296461,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p1@uc007enj.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=686 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc007enj.1_5end | |||
|description=CAGE_peak_1_at_uc007enj.1_5end | |||
|id=chr10:19438492..19438529,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.77e-17!23;UBERON:0000974!1.77e-17!23;UBERON:0004807!1.77e-17!23;UBERON:0005058!1.77e-17!23;UBERON:0003351!1.77e-17!23;UBERON:0009113!1.77e-17!23;UBERON:0003295!1.77e-17!23;UBERON:0009722!1.77e-17!23;UBERON:0005562!1.77e-17!23;UBERON:0007690!1.77e-17!23;UBERON:0004177!4.19e-17!29;UBERON:0006562!1.33e-16!24;UBERON:0003408!1.33e-16!24;UBERON:0001557!1.33e-16!24;UBERON:0001042!1.33e-16!24;UBERON:0008814!1.33e-16!24;UBERON:0009145!1.33e-16!24;UBERON:0000072!2.28e-14!27;UBERON:0002390!3.99e-14!45;UBERON:0003061!3.99e-14!45;UBERON:0002193!6.02e-13!48;UBERON:0005057!1.79e-10!51;UBERON:0000063!2.67e-10!35;UBERON:0002405!1.82e-09!70;UBERON:0002368!2.48e-09!60;UBERON:0002530!2.48e-09!65;UBERON:0000065!2.63e-08!41;UBERON:0001004!4.95e-08!42;UBERON:0000949!5.56e-08!72;UBERON:0003081!2.47e-07!88;UBERON:0003929!2.89e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.86e-24,23;UBERON:0000974,1.86e-24,23;UBERON:0004807,1.86e-24,23;UBERON:0005058,1.86e-24,23;UBERON:0003351,1.86e-24,23;UBERON:0009113,1.86e-24,23;UBERON:0003295,1.86e-24,23;UBERON:0009722,1.86e-24,23;UBERON:0005562,1.86e-24,23;UBERON:0007690,1.86e-24,23;UBERON:0006562,2.15e-23,24;UBERON:0003408,2.15e-23,24;UBERON:0001557,2.15e-23,24;UBERON:0001042,2.15e-23,24;UBERON:0008814,2.15e-23,24;UBERON:0009145,2.15e-23,24;UBERON:0000072,1.13e-20,27;UBERON:0004177,3.58e-19,29;UBERON:0005057,3.58e-19,29;UBERON:0000077,1.08e-15,35;UBERON:0007811,3.17e-15,36;UBERON:0000065,3.16e-13,41;UBERON:0001004,6.97e-13,42;UBERON:0000153,1.48e-12,43;UBERON:0002390,6.05e-12,45;UBERON:0003061,6.05e-12,45;UBERON:0002193,4.01e-11,48;UBERON:0002405,4.01e-11,48;UBERON:0003929,1.50e-09,55;UBERON:0002368,1.19e-08,60;UBERON:0002530,6.88e-08,65;UBERON:0000490,9.47e-08,66;UBERON:0005911,2.34e-07,69;UBERON:0000949,5.36e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,11.3191684369009,5.22399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.479260498023681,0,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0.136694227721025,0,1.35982743995084,1.39951452323658,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,3.04087822935246,6.88163413004343,4.15746633528944,3.04345382634718,1.98681354781265,1.80293174279953,2.21534290761866,1.31256384932592,1.21930890648,0.504130925684203,0.292373642219257,1.34696578296461,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@uc007enj.1 | |||
}} |
Revision as of 16:21, 12 September 2013
Short description: | p1@uc007enj.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007enj.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:686 |
Association with transcript: | 0bp_to_uc007enj.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.86e-24 | 23 |
neck | 1.86e-24 | 23 |
respiratory system epithelium | 1.86e-24 | 23 |
hemolymphoid system gland | 1.86e-24 | 23 |
pharyngeal epithelium | 1.86e-24 | 23 |
thymic region | 1.86e-24 | 23 |
pharyngeal gland | 1.86e-24 | 23 |
entire pharyngeal arch endoderm | 1.86e-24 | 23 |
thymus primordium | 1.86e-24 | 23 |
early pharyngeal endoderm | 1.86e-24 | 23 |
pharynx | 2.15e-23 | 24 |
gland of gut | 2.15e-23 | 24 |
upper respiratory tract | 2.15e-23 | 24 |
chordate pharynx | 2.15e-23 | 24 |
pharyngeal arch system | 2.15e-23 | 24 |
pharyngeal region of foregut | 2.15e-23 | 24 |
segment of respiratory tract | 1.13e-20 | 27 |
hemopoietic organ | 3.58e-19 | 29 |
immune organ | 3.58e-19 | 29 |
mixed endoderm/mesoderm-derived structure | 1.08e-15 | 35 |
craniocervical region | 3.17e-15 | 36 |
respiratory tract | 3.16e-13 | 41 |
respiratory system | 6.97e-13 | 42 |
anterior region of body | 1.48e-12 | 43 |
hematopoietic system | 6.05e-12 | 45 |
blood island | 6.05e-12 | 45 |
hemolymphoid system | 4.01e-11 | 48 |
immune system | 4.01e-11 | 48 |
gut epithelium | 1.50e-09 | 55 |
endocrine gland | 1.19e-08 | 60 |
gland | 6.88e-08 | 65 |
unilaminar epithelium | 9.47e-08 | 66 |
endo-epithelium | 2.34e-07 | 69 |
endocrine system | 5.36e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.