FFCP PHASE1:Hg19::chr2:203735519..203735539,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=130026|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14442|TSSclassifier=S|UniProt=C9J101|association_with_transcript=-8bp_to_ENST00000418208_5end|coexpression_cluster_id=C899|description=CAGE_peak_8_at_ICA1L_5end|id=chr2:203735519..203735539,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;1.93e-16;1!CL:0000047;6.93e-09;2|ontology_enrichment_celltype_v019_2=CL:0002553,1.65e-16,1|ontology_enrichment_development_v019=UBERON:0006215;1.11e-21;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.93e-16;1!DOID:4549;1.93e-16;1!DOID:5861;1.93e-16;1!DOID:6496;1.93e-16;1|ontology_enrichment_disease_v019_2=DOID:3371,1.41e-16,1;DOID:4549,1.41e-16,1;DOID:5861,1.41e-16,1;DOID:6496,1.41e-16,1|ontology_enrichment_uberon=UBERON:0001049!4.04e-46!57;UBERON:0005068!4.04e-46!57;UBERON:0006241!4.04e-46!57;UBERON:0007135!4.04e-46!57;UBERON:0002616!2.88e-44!59;UBERON:0000955!3.07e-41!69;UBERON:0006238!3.07e-41!69;UBERON:0002780!1.50e-40!41;UBERON:0001890!1.50e-40!41;UBERON:0006240!1.50e-40!41;UBERON:0003080!1.97e-39!42;UBERON:0001017!4.55e-38!82;UBERON:0002020!5.30e-38!34;UBERON:0003528!5.30e-38!34;UBERON:0001869!4.27e-37!32;UBERON:0005743!7.22e-36!86;UBERON:0001893!1.29e-34!34;UBERON:0000073!1.75e-33!94;UBERON:0001016!1.75e-33!94;UBERON:0002619!3.95e-33!22;UBERON:0002791!2.24e-32!33;UBERON:0002346!7.12e-30!90;UBERON:0003075!1.06e-29!86;UBERON:0007284!1.06e-29!86;UBERON:0000956!9.25e-29!25;UBERON:0000203!9.25e-29!25;UBERON:0001950!4.06e-28!20;UBERON:0007023!1.88e-27!115;UBERON:0003056!4.52e-25!61;UBERON:0000153!2.33e-23!129;UBERON:0007811!2.33e-23!129;UBERON:0000033!4.82e-22!123;UBERON:0000924!6.51e-16!173;UBERON:0006601!6.51e-16!173;UBERON:0004121!1.82e-15!169;UBERON:0001871!3.00e-13!7;UBERON:0003296!8.78e-13!4;UBERON:0010133!8.78e-13!4;UBERON:0000200!2.68e-12!6;UBERON:0000025!1.14e-10!194;UBERON:0004733!1.18e-10!12;UBERON:0002028!1.18e-10!12;UBERON:0007277!1.18e-10!12;UBERON:0002308!1.43e-10!9;UBERON:0000125!1.43e-10!9;UBERON:0000349!5.16e-10!5;UBERON:0001872!7.44e-10!5;UBERON:0004732!9.43e-10!13;UBERON:0000064!9.98e-10!219;UBERON:0002771!1.01e-09!3;UBERON:0000988!8.44e-09!3;UBERON:0004111!9.95e-09!241;UBERON:0000475!2.43e-08!365;UBERON:0003076!2.61e-08!15;UBERON:0003057!2.61e-08!15;UBERON:0000477!3.38e-08!286;UBERON:0002298!3.54e-08!8;UBERON:0002680!6.19e-08!9;UBERON:0001895!6.19e-08!9;UBERON:0010092!6.19e-08!9;UBERON:0002420!1.35e-07!9;UBERON:0007245!1.35e-07!9;UBERON:0010009!1.35e-07!9;UBERON:0010011!1.35e-07!9;UBERON:0000454!1.35e-07!9;UBERON:0000007!1.42e-07!2;UBERON:0001894!2.86e-07!7;UBERON:0006222!2.86e-07!7;UBERON:0001954!3.86e-07!2;UBERON:0003022!3.86e-07!2;UBERON:0002421!3.86e-07!2;UBERON:0002600!3.86e-07!2;UBERON:0000483!6.62e-07!309;UBERON:0001905!6.95e-07!2;UBERON:0002757!6.95e-07!2;UBERON:0010134!6.95e-07!2;UBERON:0002784!6.95e-07!2;UBERON:0005408!6.95e-07!2;UBERON:0001899!6.95e-07!2;UBERON:0000369!8.43e-07!4;UBERON:0002435!8.43e-07!4;UBERON:0000204!8.43e-07!4;UBERON:0010082!8.43e-07!4;UBERON:0000119!9.57e-07!312|ontology_enrichment_uberon_v019=UBERON:0000007;3.62e-32;2!UBERON:0003296;1.26e-16;4!UBERON:0010133;1.26e-16;4!UBERON:0000073;4.72e-14;53!UBERON:0002616;4.72e-14;53!UBERON:0001872;2.68e-13;5!UBERON:0001950;6.20e-12;20!UBERON:0001016;9.06e-12;83!UBERON:0002037;2.43e-11;6!UBERON:0002619;6.37e-11;22!UBERON:0000955;9.42e-11;68!UBERON:0001894;6.55e-10;7!UBERON:0000956;1.08e-09;25!UBERON:0000203;1.08e-09;25!UBERON:0001871;1.35e-09;6!UBERON:0002780;2.98e-09;41!UBERON:0001890;2.98e-09;41!UBERON:0002771;6.93e-09;2!UBERON:0001876;6.93e-09;2!UBERON:0001017;8.98e-09;75!UBERON:0002680;7.38e-08;9!UBERON:0001895;7.38e-08;9!UBERON:0001893;8.93e-08;34!UBERON:0003528;1.90e-07;34!UBERON:0002020;1.90e-07;34!UBERON:0001869;1.92e-07;32!UBERON:0002791;8.80e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.35e-32,2;UBERON:0000073,1.34e-17,53;UBERON:0002616,1.34e-17,53;UBERON:0001017,1.50e-17,81;UBERON:0000955,5.37e-17,68;UBERON:0006238,5.37e-17,68;UBERON:0003296,1.21e-16,4;UBERON:0010133,1.21e-16,4;UBERON:0001049,1.22e-16,56;UBERON:0005068,1.22e-16,56;UBERON:0006241,1.22e-16,56;UBERON:0007135,1.22e-16,56;UBERON:0001016,9.52e-16,89;UBERON:0001872,2.68e-13,5;UBERON:0002780,6.16e-13,41;UBERON:0001890,6.16e-13,41;UBERON:0003080,6.16e-13,41;UBERON:0006240,6.16e-13,41;UBERON:0001950,6.75e-12,20;UBERON:0002037,2.49e-11,6;UBERON:0006215,2.49e-11,6;UBERON:0003075,3.12e-11,82;UBERON:0007284,3.12e-11,82;UBERON:0002619,6.89e-11,22;UBERON:0002346,1.10e-10,86;UBERON:0001894,6.40e-10,7;UBERON:0006222,6.40e-10,7;UBERON:0000956,1.15e-09,25;UBERON:0000203,1.15e-09,25;UBERON:0001871,1.54e-09,6;UBERON:0002771,6.94e-09,2;UBERON:0001876,8.74e-09,2;UBERON:0010371,9.80e-09,104;UBERON:0003056,1.10e-08,61;UBERON:0011216,1.35e-08,223;UBERON:0004121,7.30e-08,171;UBERON:0000924,7.30e-08,171;UBERON:0006601,7.30e-08,171;UBERON:0002680,7.51e-08,9;UBERON:0001895,7.51e-08,9;UBERON:0010092,7.51e-08,9;UBERON:0002791,1.15e-07,32;UBERON:000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=130026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14442 | |||
|TSSclassifier=S | |||
|UniProt=C9J101 | |||
|association_with_transcript=-8bp_to_ENST00000418208_5end | |||
|coexpression_cluster_id=C899 | |||
|description=CAGE_peak_8_at_ICA1L_5end | |||
|id=chr2:203735519..203735539,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.93e-16;1!CL:0000047;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.65e-16,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.11e-21;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.93e-16;1!DOID:4549;1.93e-16;1!DOID:5861;1.93e-16;1!DOID:6496;1.93e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.41e-16,1;DOID:4549,1.41e-16,1;DOID:5861,1.41e-16,1;DOID:6496,1.41e-16,1 | |||
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|short_description=p8@ICA1L | |||
}} |
Revision as of 16:06, 12 September 2013
Short description: | p8@ICA1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ICA1L_5end |
Coexpression cluster: | C899_pituitary_cerebellum_occipital_parietal_testicular_brain_temporal |
Association with transcript: | -8bp_to_ENST00000418208_5end |
EntrezGene: | ICA1L |
HGNC: | 14442 |
UniProt: | C9J101 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.65e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.41e-16 | 1 |
extraosseous chondrosarcoma | 1.41e-16 | 1 |
myxoid chondrosarcoma | 1.41e-16 | 1 |
extraskeletal myxoid chondrosarcoma | 1.41e-16 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.