FFCP PHASE1:Hg19::chr22:37505474..37505478,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=164656|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16517|TSSclassifier=W|UniProt=|association_with_transcript=-25bp_to_ENST00000406725_5end|coexpression_cluster_id=C129|description=CAGE_peak_3_at_TMPRSS6_5end|id=chr22:37505474..37505478,-|ontology_enrichment_celltype=CL:0000181!2.70e-44!12;CL:0000417!2.70e-44!12;CL:0000668!2.70e-44!12;CL:0000414!2.70e-44!12;CL:0000412!2.70e-44!12;CL:0000182!2.70e-44!12;CL:0000223!2.36e-17!59;CL:0002563!6.37e-12!4;CL:0002535!6.07e-07!2|ontology_enrichment_celltype_v019=CL:0000182;1.72e-56;12!CL:0002535;1.67e-08;2|ontology_enrichment_celltype_v019_2=CL:0000182,1.79e-56,12;CL:0000223,9.58e-19,58;CL:0002535,1.73e-08,2|ontology_enrichment_development_v019=UBERON:0004161;8.34e-46;11!UBERON:0009497;9.33e-39;13!UBERON:0001041;1.01e-16;30!UBERON:0003104;3.10e-16;31!CL:0000223;2.28e-13;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.78e-46!19;UBERON:0006925!3.78e-46!19;UBERON:0008836!3.78e-46!19;UBERON:0005057!3.41e-41!26;UBERON:0008835!9.89e-40!22;UBERON:0003894!9.89e-40!22;UBERON:0009854!5.80e-38!23;UBERON:0007499!7.51e-35!25;UBERON:0009497!7.51e-35!25;UBERON:0000015!7.51e-35!25;UBERON:0002423!7.51e-35!25;UBERON:0006235!7.51e-35!25;UBERON:0004161!7.51e-35!25;UBERON:0009856!1.79e-33!26;UBERON:0002365!6.45e-28!31;UBERON:0002330!6.45e-28!31;UBERON:0003929!7.65e-28!54;UBERON:0002368!1.30e-24!35;UBERON:0000949!6.52e-19!45;UBERON:0005172!7.77e-19!55;UBERON:0005173!7.77e-19!55;UBERON:0005911!8.70e-18!82;UBERON:0002530!1.61e-17!59;UBERON:0002417!7.39e-17!61;UBERON:0000916!7.39e-17!61;UBERON:0004921!1.10e-14!129;UBERON:0004185!1.10e-14!129;UBERON:0000077!1.66e-12!130;UBERON:0001242!6.37e-12!4;UBERON:0001262!6.37e-12!4;UBERON:0004786!6.37e-12!4;UBERON:0004808!6.37e-12!4;UBERON:0001277!6.37e-12!4;UBERON:0001007!6.60e-12!155;UBERON:0001555!6.60e-12!155;UBERON:0007026!6.60e-12!155;UBERON:0001052!1.10e-11!4;UBERON:0004119!9.26e-11!169;UBERON:0000925!9.26e-11!169;UBERON:0006595!9.26e-11!169;UBERON:0001041!5.41e-10!98;UBERON:0000490!7.02e-10!138;UBERON:0003350!1.01e-09!5;UBERON:0004907!1.57e-09!5;UBERON:0005177!4.88e-09!107;UBERON:0009569!1.74e-08!113;UBERON:0002405!3.13e-08!115;UBERON:0000466!1.81e-07!126;UBERON:0006955!6.07e-07!2;UBERON:0004801!6.07e-07!2|ontology_enrichment_uberon_v019=UBERON:0002107;4.53e-59;19!UBERON:0006925;4.53e-59;19!UBERON:0002423;9.44e-45;25!UBERON:0002365;7.48e-35;31!UBERON:0002330;7.48e-35;31!UBERON:0002368;1.46e-30;33!UBERON:0000949;7.47e-22;43!UBERON:0002530;8.13e-14;57!UBERON:0005172;2.27e-13;52!UBERON:0005173;2.27e-13;52!UBERON:0002417;2.14e-12;58!UBERON:0000916;2.14e-12;58!UBERON:0001007;1.84e-09;81!UBERON:0006955;1.67e-08;2!UBERON:0004801;1.67e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.54e-59,19;UBERON:0006925,4.54e-59,19;UBERON:0008836,4.54e-59,19;UBERON:0008835,6.17e-51,22;UBERON:0003894,6.17e-51,22;UBERON:0009854,1.07e-48,23;UBERON:0007499,9.45e-45,25;UBERON:0009497,9.45e-45,25;UBERON:0000015,9.45e-45,25;UBERON:0002423,9.45e-45,25;UBERON:0006235,9.45e-45,25;UBERON:0004161,9.45e-45,25;UBERON:0009856,5.26e-43,26;UBERON:0002365,5.78e-36,31;UBERON:0002330,5.78e-36,31;UBERON:0002368,8.91e-32,35;UBERON:0003929,1.82e-30,54;UBERON:0000949,1.48e-24,45;UBERON:0002530,6.51e-23,59;UBERON:0005172,2.46e-20,54;UBERON:0005173,2.46e-20,54;UBERON:0005911,1.03e-19,82;UBERON:0002417,3.20e-18,60;UBERON:0000916,3.20e-18,60;UBERON:0004921,3.10e-13,118;UBERON:0001041,2.65e-12,87;UBERON:0001007,1.44e-10,145;UBERON:0001555,1.44e-10,145;UBERON:0007026,1.44e-10,145;UBERON:0005256,1.46e-10,122;UBERON:0005177,1.80e-10,101;UBERON:0000490,2.08e-10,148;UBERON:0004119,1.81e-09,160;UBERON:0000925,1.81e-09,160;UBERON:0006595,1.81e-09,160;UBERON:0009569,2.36e-09,112;UBERON:0003914,6.51e-09,117;UBERON:0006955,1.73e-08,2;UBERON:0004801,1.73e-08,2;UBERON:0003104,8.67e-08,160;UBERON:0009142,8.67e-08,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,2.95394953340702,0,2.95172252503473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46117361732928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89547764039252,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=164656 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16517 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENST00000406725_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_3_at_TMPRSS6_5end | |||
|id=chr22:37505474..37505478,- | |||
|ontology_enrichment_celltype=CL:0000181!2.70e-44!12;CL:0000417!2.70e-44!12;CL:0000668!2.70e-44!12;CL:0000414!2.70e-44!12;CL:0000412!2.70e-44!12;CL:0000182!2.70e-44!12;CL:0000223!2.36e-17!59;CL:0002563!6.37e-12!4;CL:0002535!6.07e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.72e-56;12!CL:0002535;1.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.79e-56,12;CL:0000223,9.58e-19,58;CL:0002535,1.73e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.34e-46;11!UBERON:0009497;9.33e-39;13!UBERON:0001041;1.01e-16;30!UBERON:0003104;3.10e-16;31!CL:0000223;2.28e-13;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.78e-46!19;UBERON:0006925!3.78e-46!19;UBERON:0008836!3.78e-46!19;UBERON:0005057!3.41e-41!26;UBERON:0008835!9.89e-40!22;UBERON:0003894!9.89e-40!22;UBERON:0009854!5.80e-38!23;UBERON:0007499!7.51e-35!25;UBERON:0009497!7.51e-35!25;UBERON:0000015!7.51e-35!25;UBERON:0002423!7.51e-35!25;UBERON:0006235!7.51e-35!25;UBERON:0004161!7.51e-35!25;UBERON:0009856!1.79e-33!26;UBERON:0002365!6.45e-28!31;UBERON:0002330!6.45e-28!31;UBERON:0003929!7.65e-28!54;UBERON:0002368!1.30e-24!35;UBERON:0000949!6.52e-19!45;UBERON:0005172!7.77e-19!55;UBERON:0005173!7.77e-19!55;UBERON:0005911!8.70e-18!82;UBERON:0002530!1.61e-17!59;UBERON:0002417!7.39e-17!61;UBERON:0000916!7.39e-17!61;UBERON:0004921!1.10e-14!129;UBERON:0004185!1.10e-14!129;UBERON:0000077!1.66e-12!130;UBERON:0001242!6.37e-12!4;UBERON:0001262!6.37e-12!4;UBERON:0004786!6.37e-12!4;UBERON:0004808!6.37e-12!4;UBERON:0001277!6.37e-12!4;UBERON:0001007!6.60e-12!155;UBERON:0001555!6.60e-12!155;UBERON:0007026!6.60e-12!155;UBERON:0001052!1.10e-11!4;UBERON:0004119!9.26e-11!169;UBERON:0000925!9.26e-11!169;UBERON:0006595!9.26e-11!169;UBERON:0001041!5.41e-10!98;UBERON:0000490!7.02e-10!138;UBERON:0003350!1.01e-09!5;UBERON:0004907!1.57e-09!5;UBERON:0005177!4.88e-09!107;UBERON:0009569!1.74e-08!113;UBERON:0002405!3.13e-08!115;UBERON:0000466!1.81e-07!126;UBERON:0006955!6.07e-07!2;UBERON:0004801!6.07e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.53e-59;19!UBERON:0006925;4.53e-59;19!UBERON:0002423;9.44e-45;25!UBERON:0002365;7.48e-35;31!UBERON:0002330;7.48e-35;31!UBERON:0002368;1.46e-30;33!UBERON:0000949;7.47e-22;43!UBERON:0002530;8.13e-14;57!UBERON:0005172;2.27e-13;52!UBERON:0005173;2.27e-13;52!UBERON:0002417;2.14e-12;58!UBERON:0000916;2.14e-12;58!UBERON:0001007;1.84e-09;81!UBERON:0006955;1.67e-08;2!UBERON:0004801;1.67e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.54e-59,19;UBERON:0006925,4.54e-59,19;UBERON:0008836,4.54e-59,19;UBERON:0008835,6.17e-51,22;UBERON:0003894,6.17e-51,22;UBERON:0009854,1.07e-48,23;UBERON:0007499,9.45e-45,25;UBERON:0009497,9.45e-45,25;UBERON:0000015,9.45e-45,25;UBERON:0002423,9.45e-45,25;UBERON:0006235,9.45e-45,25;UBERON:0004161,9.45e-45,25;UBERON:0009856,5.26e-43,26;UBERON:0002365,5.78e-36,31;UBERON:0002330,5.78e-36,31;UBERON:0002368,8.91e-32,35;UBERON:0003929,1.82e-30,54;UBERON:0000949,1.48e-24,45;UBERON:0002530,6.51e-23,59;UBERON:0005172,2.46e-20,54;UBERON:0005173,2.46e-20,54;UBERON:0005911,1.03e-19,82;UBERON:0002417,3.20e-18,60;UBERON:0000916,3.20e-18,60;UBERON:0004921,3.10e-13,118;UBERON:0001041,2.65e-12,87;UBERON:0001007,1.44e-10,145;UBERON:0001555,1.44e-10,145;UBERON:0007026,1.44e-10,145;UBERON:0005256,1.46e-10,122;UBERON:0005177,1.80e-10,101;UBERON:0000490,2.08e-10,148;UBERON:0004119,1.81e-09,160;UBERON:0000925,1.81e-09,160;UBERON:0006595,1.81e-09,160;UBERON:0009569,2.36e-09,112;UBERON:0003914,6.51e-09,117;UBERON:0006955,1.73e-08,2;UBERON:0004801,1.73e-08,2;UBERON:0003104,8.67e-08,160;UBERON:0009142,8.67e-08,160 | |||
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|short_description=p3@TMPRSS6 | |||
}} |
Revision as of 11:49, 12 September 2013
Short description: | p3@TMPRSS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TMPRSS6_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -25bp_to_ENST00000406725_5end |
EntrezGene: | TMPRSS6 |
HGNC: | 16517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.79e-56 | 12 |
endodermal cell | 9.58e-19 | 58 |
epithelial cell of cervix | 1.73e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.