FFCP PHASE1:Hg19::chr21:40984857..40984877,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10317|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=920|TSSclassifier=S|UniProt=|association_with_transcript=-94bp_to_uc002yye.2,uc002yyf.1_5end|description=CAGE_peak_1_at_B3GALT5_5end|id=chr21:40984857..40984877,+|ontology_enrichment_celltype=CL:1000507!3.61e-07!12;CL:1000494!3.61e-07!12|ontology_enrichment_celltype_v019=CL:0002322;2.13e-12;5!CL:1000507;4.20e-10;10!CL:1000494;4.20e-10;10!CL:1000497;3.84e-09;17!CL:0002518;3.84e-09;17!CL:1000449;3.33e-08;15!CL:0000064;1.42e-07;3!CL:0000067;1.42e-07;3!CL:0005012;1.42e-07;3!CL:0002304;1.42e-07;3|ontology_enrichment_celltype_v019_2=CL:0002322,2.15e-12,5;CL:1000507,4.07e-10,10;CL:1000494,4.07e-10,10;CL:1000497,3.60e-09,17;CL:0002518,3.60e-09,17;CL:1000449,3.12e-08,15;CL:0000064,1.52e-07,3;CL:0000067,1.52e-07,3;CL:0005012,1.52e-07,3;CL:0002304,1.52e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.08e-23!57;UBERON:0005068!5.08e-23!57;UBERON:0006241!5.08e-23!57;UBERON:0007135!5.08e-23!57;UBERON:0002346!5.13e-23!90;UBERON:0000073!6.49e-23!94;UBERON:0001016!6.49e-23!94;UBERON:0003075!1.11e-22!86;UBERON:0007284!1.11e-22!86;UBERON:0007023!1.34e-21!115;UBERON:0005743!1.16e-20!86;UBERON:0001017!1.72e-19!82;UBERON:0003056!2.36e-19!61;UBERON:0000924!2.95e-19!173;UBERON:0006601!2.95e-19!173;UBERON:0002616!6.50e-19!59;UBERON:0004121!9.46e-19!169;UBERON:0002780!1.37e-17!41;UBERON:0001890!1.37e-17!41;UBERON:0006240!1.37e-17!41;UBERON:0003080!6.82e-17!42;UBERON:0001893!9.16e-17!34;UBERON:0002020!9.56e-17!34;UBERON:0003528!9.56e-17!34;UBERON:0000153!1.92e-16!129;UBERON:0007811!1.92e-16!129;UBERON:0000955!2.57e-16!69;UBERON:0006238!2.57e-16!69;UBERON:0002791!3.92e-16!33;UBERON:0001869!1.06e-15!32;UBERON:0000033!4.52e-15!123;UBERON:0000064!1.11e-14!219;UBERON:0000475!2.22e-13!365;UBERON:0000468!1.74e-11!659;UBERON:0000062!1.96e-11!511;UBERON:0000481!3.36e-10!347;UBERON:0000956!3.65e-10!25;UBERON:0000203!3.65e-10!25;UBERON:0002619!2.56e-09!22;UBERON:0000922!4.95e-09!612;UBERON:0000489!5.92e-09!32;UBERON:0002308!9.83e-09!9;UBERON:0000125!9.83e-09!9;UBERON:0000467!2.25e-08!625;UBERON:0000480!2.80e-08!626;UBERON:0001950!3.06e-08!20;UBERON:0009663!1.26e-07!7;UBERON:0003076!2.36e-07!15;UBERON:0003057!2.36e-07!15;UBERON:0009773!3.61e-07!12;UBERON:0001231!3.61e-07!12;UBERON:0004810!3.61e-07!12;UBERON:0000119!4.44e-07!312;UBERON:0002420!7.69e-07!9;UBERON:0007245!7.69e-07!9;UBERON:0010009!7.69e-07!9;UBERON:0010011!7.69e-07!9;UBERON:0000454!7.69e-07!9|ontology_enrichment_uberon_v019=UBERON:0009663;2.62e-11;7!UBERON:0000125;2.63e-11;9!UBERON:0002308;2.63e-11;9!UBERON:0004211;4.20e-10;10!UBERON:0009773;4.20e-10;10!UBERON:0001231;4.20e-10;10!UBERON:0004810;4.20e-10;10!UBERON:0000369;1.32e-09;4!UBERON:0002435;1.32e-09;4!UBERON:0000204;1.32e-09;4!UBERON:0000922;1.77e-09;49!UBERON:0000488;3.91e-09;4!UBERON:0002420;1.34e-08;9!UBERON:0007245;1.34e-08;9!UBERON:0010009;1.34e-08;9!UBERON:0010011;1.34e-08;9!UBERON:0000454;1.34e-08;9!UBERON:0007625;2.19e-08;11!UBERON:0006555;3.33e-08;15!UBERON:0004819;3.33e-08;15!UBERON:0001285;3.33e-08;15!UBERON:0007684;3.33e-08;15!UBERON:0001032;4.20e-08;24!UBERON:0004456;4.20e-08;24!UBERON:0000489;4.26e-08;29!UBERON:0002104;6.14e-08;21!UBERON:0005383;1.15e-07;3!UBERON:0005382;1.15e-07;3!UBERON:0001778;1.42e-07;3!UBERON:0001775;1.42e-07;3!UBERON:0002113;2.96e-07;24!UBERON:0011143;2.96e-07;24!UBERON:0000020;4.50e-07;23!UBERON:0000970;7.19e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0009663,2.34e-11,7;UBERON:0000125,3.19e-11,9;UBERON:0002308,3.19e-11,9;UBERON:0003056,1.40e-10,61;UBERON:0002346,3.96e-10,86;UBERON:0004810,4.07e-10,10;UBERON:0003075,6.93e-10,82;UBERON:0007284,6.93e-10,82;UBERON:0000369,1.14e-09,4;UBERON:0002435,1.14e-09,4;UBERON:0000204,1.14e-09,4;UBERON:0010082,1.14e-09,4;UBERON:0006555,1.94e-09,16;UBERON:0004819,1.94e-09,16;UBERON:0000488,3.04e-09,4;UBERON:0010371,6.10e-09,104;UBERON:0004121,8.92e-09,171;UBERON:0000924,8.92e-09,171;UBERON:0006601,8.92e-09,171;UBERON:0000489,1.21e-08,31;UBERON:0002420,1.23e-08,9;UBERON:0007245,1.23e-08,9;UBERON:0010009,1.23e-08,9;UBERON:0010011,1.23e-08,9;UBERON:0000454,1.23e-08,9;UBERON:0007625,2.55e-08,11;UBERON:0004211,3.12e-08,15;UBERON:0009773,3.12e-08,15;UBERON:0001231,3.12e-08,15;UBERON:0001285,3.12e-08,15;UBERON:0007684,3.12e-08,15;UBERON:0004208,3.12e-08,15;UBERON:0000020,4.58e-08,24;UBERON:0001032,4.58e-08,24;UBERON:0004456,4.58e-08,24;UBERON:0000970,7.20e-08,21;UBERON:0002104,7.20e-08,21;UBERON:0000922,8.22e-08,592;UBERON:0002113,8.44e-08,26;UBERON:0003918,8.44e-08,26;UBERON:0011143,8.44e-08,26;UBERON:0005095,8.44e-08,26;UBERON:0007687,8.44e-08,26;UBERON:0005383,9.98e-08,3;UBERON:0005382,9.98e-08,3;UBERON:0011216,1.36e-07,223;UBERON:0001778,1.52e-07,3;UBERON:0001775,1.52e-07,3;UBERON:0001016,4.62e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,0.527533956456907,0,0,0,0,0,0,0.8618474065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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10317 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=920 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-94bp_to_uc002yye.2,uc002yyf.1_5end | |||
|description=CAGE_peak_1_at_B3GALT5_5end | |||
|id=chr21:40984857..40984877,+ | |||
|ontology_enrichment_celltype=CL:1000507!3.61e-07!12;CL:1000494!3.61e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.13e-12;5!CL:1000507;4.20e-10;10!CL:1000494;4.20e-10;10!CL:1000497;3.84e-09;17!CL:0002518;3.84e-09;17!CL:1000449;3.33e-08;15!CL:0000064;1.42e-07;3!CL:0000067;1.42e-07;3!CL:0005012;1.42e-07;3!CL:0002304;1.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.15e-12,5;CL:1000507,4.07e-10,10;CL:1000494,4.07e-10,10;CL:1000497,3.60e-09,17;CL:0002518,3.60e-09,17;CL:1000449,3.12e-08,15;CL:0000064,1.52e-07,3;CL:0000067,1.52e-07,3;CL:0005012,1.52e-07,3;CL:0002304,1.52e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.08e-23!57;UBERON:0005068!5.08e-23!57;UBERON:0006241!5.08e-23!57;UBERON:0007135!5.08e-23!57;UBERON:0002346!5.13e-23!90;UBERON:0000073!6.49e-23!94;UBERON:0001016!6.49e-23!94;UBERON:0003075!1.11e-22!86;UBERON:0007284!1.11e-22!86;UBERON:0007023!1.34e-21!115;UBERON:0005743!1.16e-20!86;UBERON:0001017!1.72e-19!82;UBERON:0003056!2.36e-19!61;UBERON:0000924!2.95e-19!173;UBERON:0006601!2.95e-19!173;UBERON:0002616!6.50e-19!59;UBERON:0004121!9.46e-19!169;UBERON:0002780!1.37e-17!41;UBERON:0001890!1.37e-17!41;UBERON:0006240!1.37e-17!41;UBERON:0003080!6.82e-17!42;UBERON:0001893!9.16e-17!34;UBERON:0002020!9.56e-17!34;UBERON:0003528!9.56e-17!34;UBERON:0000153!1.92e-16!129;UBERON:0007811!1.92e-16!129;UBERON:0000955!2.57e-16!69;UBERON:0006238!2.57e-16!69;UBERON:0002791!3.92e-16!33;UBERON:0001869!1.06e-15!32;UBERON:0000033!4.52e-15!123;UBERON:0000064!1.11e-14!219;UBERON:0000475!2.22e-13!365;UBERON:0000468!1.74e-11!659;UBERON:0000062!1.96e-11!511;UBERON:0000481!3.36e-10!347;UBERON:0000956!3.65e-10!25;UBERON:0000203!3.65e-10!25;UBERON:0002619!2.56e-09!22;UBERON:0000922!4.95e-09!612;UBERON:0000489!5.92e-09!32;UBERON:0002308!9.83e-09!9;UBERON:0000125!9.83e-09!9;UBERON:0000467!2.25e-08!625;UBERON:0000480!2.80e-08!626;UBERON:0001950!3.06e-08!20;UBERON:0009663!1.26e-07!7;UBERON:0003076!2.36e-07!15;UBERON:0003057!2.36e-07!15;UBERON:0009773!3.61e-07!12;UBERON:0001231!3.61e-07!12;UBERON:0004810!3.61e-07!12;UBERON:0000119!4.44e-07!312;UBERON:0002420!7.69e-07!9;UBERON:0007245!7.69e-07!9;UBERON:0010009!7.69e-07!9;UBERON:0010011!7.69e-07!9;UBERON:0000454!7.69e-07!9 | |||
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| |||
|short_description=p1@B3GALT5 | |||
}} |
Revision as of 10:25, 12 September 2013
Short description: | p1@B3GALT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B3GALT5_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_uc002yye.2, uc002yyf.1_5end |
EntrezGene: | B3GALT5 |
HGNC: | 920 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.15e-12 | 5 |
kidney tubule cell | 4.07e-10 | 10 |
nephron tubule epithelial cell | 4.07e-10 | 10 |
kidney cell | 3.60e-09 | 17 |
kidney epithelial cell | 3.60e-09 | 17 |
epithelial cell of nephron | 3.12e-08 | 15 |
ciliated cell | 1.52e-07 | 3 |
ciliated epithelial cell | 1.52e-07 | 3 |
multi-ciliated epithelial cell | 1.52e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.52e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.