FFCP PHASE1:Hg19::chr1:99772462..99772471,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9890|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=Q3ZCT6|association_with_transcript=246bp_to_BC041386_5end|description=CAGE_peak_8_at_LPPR4_5end|id=chr1:99772462..99772471,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006241;7.02e-08;3!UBERON:0003057;7.02e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;5.71e-21;1!DOID:3451;3.52e-11;2!DOID:4159;3.52e-11;2!DOID:0060122;3.52e-11;2|ontology_enrichment_disease_v019_2=DOID:2513,5.16e-21,1;DOID:3451,3.35e-11,2;DOID:4159,3.35e-11,2;DOID:0060122,3.35e-11,2|ontology_enrichment_uberon=UBERON:0002780!3.52e-39!41;UBERON:0001890!3.52e-39!41;UBERON:0006240!3.52e-39!41;UBERON:0003080!3.88e-38!42;UBERON:0001017!1.56e-34!82;UBERON:0000956!2.25e-34!25;UBERON:0000203!2.25e-34!25;UBERON:0001869!1.20e-33!32;UBERON:0000073!2.59e-33!94;UBERON:0001016!2.59e-33!94;UBERON:0005743!1.27e-32!86;UBERON:0002791!1.59e-32!33;UBERON:0002020!1.82e-31!34;UBERON:0003528!1.82e-31!34;UBERON:0001893!1.82e-31!34;UBERON:0000955!1.69e-30!69;UBERON:0006238!1.69e-30!69;UBERON:0002619!3.80e-30!22;UBERON:0001049!1.05e-29!57;UBERON:0005068!1.05e-29!57;UBERON:0006241!1.05e-29!57;UBERON:0007135!1.05e-29!57;UBERON:0003056!2.61e-27!61;UBERON:0002616!9.58e-26!59;UBERON:0001950!3.90e-24!20;UBERON:0000349!4.63e-20!5;UBERON:0003075!9.91e-20!86;UBERON:0007284!9.91e-20!86;UBERON:0004121!2.21e-19!169;UBERON:0000033!5.59e-19!123;UBERON:0000924!9.41e-19!173;UBERON:0006601!9.41e-19!173;UBERON:0002346!1.33e-18!90;UBERON:0000153!8.74e-18!129;UBERON:0007811!8.74e-18!129;UBERON:0001871!1.21e-17!7;UBERON:0002771!1.74e-12!3;UBERON:0007023!7.21e-11!115;UBERON:0000200!2.12e-10!6;UBERON:0001876!2.92e-09!2;UBERON:0001905!3.71e-09!2;UBERON:0002757!3.71e-09!2;UBERON:0010134!3.71e-09!2;UBERON:0002784!3.71e-09!2;UBERON:0005408!3.71e-09!2;UBERON:0001899!3.71e-09!2;UBERON:0001894!4.25e-09!7;UBERON:0006222!4.25e-09!7;UBERON:0001954!4.36e-09!2;UBERON:0003022!4.36e-09!2;UBERON:0002421!4.36e-09!2;UBERON:0002600!4.36e-09!2;UBERON:0000064!8.96e-08!219;UBERON:0002420!2.94e-07!9;UBERON:0007245!2.94e-07!9;UBERON:0010009!2.94e-07!9;UBERON:0010011!2.94e-07!9;UBERON:0000454!2.94e-07!9;UBERON:0000025!4.05e-07!194|ontology_enrichment_uberon_v019=UBERON:0001871;1.94e-12;6!UBERON:0002771;2.12e-11;2!UBERON:0001876;2.47e-11;2!UBERON:0001905;3.52e-11;2!UBERON:0002757;3.52e-11;2!UBERON:0010134;3.52e-11;2!UBERON:0005408;3.52e-11;2!UBERON:0001899;3.52e-11;2!UBERON:0001950;3.45e-09;20!UBERON:0002619;1.93e-08;22!UBERON:0002240;7.02e-08;3!UBERON:0005174;7.02e-08;3!UBERON:0002114;7.02e-08;2!UBERON:0001137;7.02e-08;3!UBERON:0000956;1.56e-07;25!UBERON:0000203;1.56e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.00e-12,6;UBERON:0001017,1.63e-11,81;UBERON:0002771,2.23e-11,2;UBERON:0001876,2.47e-11,2;UBERON:0001905,4.09e-11,2;UBERON:0002757,4.09e-11,2;UBERON:0010134,4.09e-11,2;UBERON:0005408,4.09e-11,2;UBERON:0001899,4.09e-11,2;UBERON:0001016,2.31e-10,89;UBERON:0001950,3.75e-09,20;UBERON:0001049,8.46e-09,56;UBERON:0005068,8.46e-09,56;UBERON:0006241,8.46e-09,56;UBERON:0007135,8.46e-09,56;UBERON:0002619,2.08e-08,22;UBERON:0002114,5.93e-08,2;UBERON:0002240,6.34e-08,3;UBERON:0005174,6.34e-08,3;UBERON:0001137,6.34e-08,3;UBERON:0002780,6.84e-08,41;UBERON:0001890,6.84e-08,41;UBERON:0003080,6.84e-08,41;UBERON:0006240,6.84e-08,41;UBERON:0000956,1.67e-07,25;UBERON:0000203,1.67e-07,25;UBERON:0000955,3.37e-07,68;UBERON:0006238,3.37e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.562677665642051,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt=Q3ZCT6 | |||
|association_with_transcript=246bp_to_BC041386_5end | |||
|description=CAGE_peak_8_at_LPPR4_5end | |||
|id=chr1:99772462..99772471,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.02e-08;3!UBERON:0003057;7.02e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;5.71e-21;1!DOID:3451;3.52e-11;2!DOID:4159;3.52e-11;2!DOID:0060122;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,5.16e-21,1;DOID:3451,3.35e-11,2;DOID:4159,3.35e-11,2;DOID:0060122,3.35e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!3.52e-39!41;UBERON:0001890!3.52e-39!41;UBERON:0006240!3.52e-39!41;UBERON:0003080!3.88e-38!42;UBERON:0001017!1.56e-34!82;UBERON:0000956!2.25e-34!25;UBERON:0000203!2.25e-34!25;UBERON:0001869!1.20e-33!32;UBERON:0000073!2.59e-33!94;UBERON:0001016!2.59e-33!94;UBERON:0005743!1.27e-32!86;UBERON:0002791!1.59e-32!33;UBERON:0002020!1.82e-31!34;UBERON:0003528!1.82e-31!34;UBERON:0001893!1.82e-31!34;UBERON:0000955!1.69e-30!69;UBERON:0006238!1.69e-30!69;UBERON:0002619!3.80e-30!22;UBERON:0001049!1.05e-29!57;UBERON:0005068!1.05e-29!57;UBERON:0006241!1.05e-29!57;UBERON:0007135!1.05e-29!57;UBERON:0003056!2.61e-27!61;UBERON:0002616!9.58e-26!59;UBERON:0001950!3.90e-24!20;UBERON:0000349!4.63e-20!5;UBERON:0003075!9.91e-20!86;UBERON:0007284!9.91e-20!86;UBERON:0004121!2.21e-19!169;UBERON:0000033!5.59e-19!123;UBERON:0000924!9.41e-19!173;UBERON:0006601!9.41e-19!173;UBERON:0002346!1.33e-18!90;UBERON:0000153!8.74e-18!129;UBERON:0007811!8.74e-18!129;UBERON:0001871!1.21e-17!7;UBERON:0002771!1.74e-12!3;UBERON:0007023!7.21e-11!115;UBERON:0000200!2.12e-10!6;UBERON:0001876!2.92e-09!2;UBERON:0001905!3.71e-09!2;UBERON:0002757!3.71e-09!2;UBERON:0010134!3.71e-09!2;UBERON:0002784!3.71e-09!2;UBERON:0005408!3.71e-09!2;UBERON:0001899!3.71e-09!2;UBERON:0001894!4.25e-09!7;UBERON:0006222!4.25e-09!7;UBERON:0001954!4.36e-09!2;UBERON:0003022!4.36e-09!2;UBERON:0002421!4.36e-09!2;UBERON:0002600!4.36e-09!2;UBERON:0000064!8.96e-08!219;UBERON:0002420!2.94e-07!9;UBERON:0007245!2.94e-07!9;UBERON:0010009!2.94e-07!9;UBERON:0010011!2.94e-07!9;UBERON:0000454!2.94e-07!9;UBERON:0000025!4.05e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;1.94e-12;6!UBERON:0002771;2.12e-11;2!UBERON:0001876;2.47e-11;2!UBERON:0001905;3.52e-11;2!UBERON:0002757;3.52e-11;2!UBERON:0010134;3.52e-11;2!UBERON:0005408;3.52e-11;2!UBERON:0001899;3.52e-11;2!UBERON:0001950;3.45e-09;20!UBERON:0002619;1.93e-08;22!UBERON:0002240;7.02e-08;3!UBERON:0005174;7.02e-08;3!UBERON:0002114;7.02e-08;2!UBERON:0001137;7.02e-08;3!UBERON:0000956;1.56e-07;25!UBERON:0000203;1.56e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.00e-12,6;UBERON:0001017,1.63e-11,81;UBERON:0002771,2.23e-11,2;UBERON:0001876,2.47e-11,2;UBERON:0001905,4.09e-11,2;UBERON:0002757,4.09e-11,2;UBERON:0010134,4.09e-11,2;UBERON:0005408,4.09e-11,2;UBERON:0001899,4.09e-11,2;UBERON:0001016,2.31e-10,89;UBERON:0001950,3.75e-09,20;UBERON:0001049,8.46e-09,56;UBERON:0005068,8.46e-09,56;UBERON:0006241,8.46e-09,56;UBERON:0007135,8.46e-09,56;UBERON:0002619,2.08e-08,22;UBERON:0002114,5.93e-08,2;UBERON:0002240,6.34e-08,3;UBERON:0005174,6.34e-08,3;UBERON:0001137,6.34e-08,3;UBERON:0002780,6.84e-08,41;UBERON:0001890,6.84e-08,41;UBERON:0003080,6.84e-08,41;UBERON:0006240,6.84e-08,41;UBERON:0000956,1.67e-07,25;UBERON:0000203,1.67e-07,25;UBERON:0000955,3.37e-07,68;UBERON:0006238,3.37e-07,68 | |||
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|short_description=p8@LPPR4 | |||
}} |
Revision as of 07:25, 12 September 2013
Short description: | p8@LPPR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_LPPR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 246bp_to_BC041386_5end |
EntrezGene: | LPPR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 2.00e-12 | 6 |
central nervous system | 1.63e-11 | 81 |
middle temporal gyrus | 2.23e-11 | 2 |
amygdala | 2.47e-11 | 2 |
pineal body | 4.09e-11 | 2 |
regional part of epithalamus | 4.09e-11 | 2 |
secretory circumventricular organ | 4.09e-11 | 2 |
circumventricular organ | 4.09e-11 | 2 |
epithalamus | 4.09e-11 | 2 |
nervous system | 2.31e-10 | 89 |
neocortex | 3.75e-09 | 20 |
neural tube | 8.46e-09 | 56 |
neural rod | 8.46e-09 | 56 |
future spinal cord | 8.46e-09 | 56 |
neural keel | 8.46e-09 | 56 |
regional part of cerebral cortex | 2.08e-08 | 22 |
duodenum | 5.93e-08 | 2 |
spinal cord | 6.34e-08 | 3 |
dorsal region element | 6.34e-08 | 3 |
dorsum | 6.34e-08 | 3 |
regional part of forebrain | 6.84e-08 | 41 |
forebrain | 6.84e-08 | 41 |
anterior neural tube | 6.84e-08 | 41 |
future forebrain | 6.84e-08 | 41 |
cerebral cortex | 1.67e-07 | 25 |
pallium | 1.67e-07 | 25 |
brain | 3.37e-07 | 68 |
future brain | 3.37e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 5.16e-21 | 1 |
skin carcinoma | 3.35e-11 | 2 |
skin cancer | 3.35e-11 | 2 |
integumentary system cancer | 3.35e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.