DOID:4159

Name:	skin cancer
Namespace:	FANTOM
Definition:	"An organ system cancer located_in the skin that is the uncontrolled growth of abnormal skin cells." [url:http://www.ncbi.nlm.nih.gov/pubmedhealth/PMH0002414/]
Xrefs:	Expandlinks: MSH:D012878 NCI:C2920 SNOMEDCT_2010_1_31:188143008 SNOMEDCT_2010_1_31:190107001 SNOMEDCT_2010_1_31:363511009 SNOMEDCT_2010_1_31:372130007 UMLS_CUI:C0007114
Synonyms:	"CA - skin cancer" EXACT [SNOMEDCT_2005_07_31:363511009] "cancer of skin" RELATED [] "malignant neoplasm of skin" EXACT [MTH:NOCODE] "malignant neoplasm of skin (disorder)" EXACT [SNOMEDCT_2005_07_31:372130007] "malignant neoplasm of skin NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:188143008] "malignant neoplasm of skin, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190107001] "melanoma and Non-melanoma skin cancer" EXACT [NCI2004_11_17:C2920] "skin cancer" EXACT [CSP2005:2020-0536]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

---

Parents

is_a:	DOID:0060122(integumentary system cancer)

Children

is a:	DOID:3451 (skin carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

• 10702-109G9 (basal cell carcinoma cell line:TE 354.T)
• 10713-109I2
• 10791-110H8 (keratoacanthoma cell line:HKA-1)

Mouse (Mus musculus)

• 10702-109G9 (basal cell carcinoma cell line:TE 354.T)
• 10713-109I2
• 10791-110H8 (keratoacanthoma cell line:HKA-1)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4159 (skin cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

---

Copy Excel CSV PDF

Show 102550100 entries

Search:

P-value	FFCP	Short description

P-value	FFCP	Short description
1.55e-98	FFCP PHASE2:Hg19::chr10:69686723..69686726,-	p@chr10:69686723..69686726, -
1.55e-98	FFCP PHASE1:Hg19::chr10:69686723..69686726,-	p@chr10:69686723..69686726, -
4.52e-50	FFCP PHASE1:Hg19::chr8:123875147..123875159,+	p26@ZHX2
4.52e-50	FFCP PHASE2:Hg19::chr7:101448277..101448287,+	p@chr7:101448277..101448287, +
4.52e-50	FFCP PHASE1:Hg19::chr7:101448249..101448254,+	p@chr7:101448249..101448254, +
4.52e-50	FFCP PHASE1:Hg19::chr1:153431372..153431378,-	p4@S100A7
4.52e-50	FFCP PHASE2:Hg19::chr7:101448101..101448113,+	p@chr7:101448101..101448113, +
4.52e-50	FFCP PHASE2:Hg19::chr18:22080172..22080183,+	p@chr18:22080172..22080183, +
4.52e-50	FFCP PHASE1:Hg19::chr7:101448277..101448287,+	p@chr7:101448277..101448287, +
4.52e-50	FFCP PHASE2:Hg19::chr7:101448176..101448184,+	p@chr7:101448176..101448184, +
4.52e-50	FFCP PHASE1:Hg19::chr18:22080172..22080183,+	p@chr18:22080172..22080183, +
4.52e-50	FFCP PHASE1:Hg19::chr7:101448101..101448113,+	p@chr7:101448101..101448113, +
4.52e-50	FFCP PHASE2:Hg19::chr8:123875147..123875159,+	p26@ZHX2
4.52e-50	FFCP PHASE1:Hg19::chr7:101448176..101448184,+	p@chr7:101448176..101448184, +
4.52e-50	FFCP PHASE2:Hg19::chr1:153431372..153431378,-	p4@S100A7
4.52e-50	FFCP PHASE2:Hg19::chr7:101448249..101448254,+	p@chr7:101448249..101448254, +
3.61e-34	FFCP PHASE1:Hg19::chr9:97563078..97563086,+	p@chr9:97563078..97563086, +
3.61e-34	FFCP PHASE1:Hg19::chr20:49047228..49047236,-	p@chr20:49047228..49047236, -
3.61e-34	FFCP PHASE2:Hg19::chr9:97563078..97563086,+	p@chr9:97563078..97563086, +
3.61e-34	FFCP PHASE2:Hg19::chr20:49047228..49047236,-	p@chr20:49047228..49047236, -
5.04e-34	FFCP PHASE2:Hg19::chr3:81671636..81671662,-	p@chr3:81671636..81671662, -
5.04e-34	FFCP PHASE2:Hg19::chr21:37376927..37376938,+	p@chr21:37376927..37376938, +
5.04e-34	FFCP PHASE2:Hg19::chr1:76127067..76127073,-	p@chr1:76127067..76127073, -
5.04e-34	FFCP PHASE2:Hg19::chr18:61254400..61254410,+	p8@SERPINB13
5.04e-34	FFCP PHASE1:Hg19::chr21:37376927..37376938,+	p@chr21:37376927..37376938, +
5.04e-34	FFCP PHASE1:Hg19::chr18:61254400..61254410,+	p8@SERPINB13
5.04e-34	FFCP PHASE1:Hg19::chr3:81671636..81671662,-	p@chr3:81671636..81671662, -
5.04e-34	FFCP PHASE2:Hg19::chr17:19648916..19648937,-	p10@ALDH3A1
5.04e-34	FFCP PHASE1:Hg19::chr1:76127067..76127073,-	p@chr1:76127067..76127073, -
5.04e-34	FFCP PHASE1:Hg19::chr17:19648916..19648937,-	p10@ALDH3A1
7.05e-34	FFCP PHASE2:Hg19::chr17:48072063..48072074,-	p5@DLX3
7.05e-34	FFCP PHASE1:Hg19::chr19:51517875..51517889,-	p3@AK026045
7.05e-34	FFCP PHASE1:Hg19::chr2:178179611..178179619,-	p4@ENST00000443132
7.05e-34	FFCP PHASE2:Hg19::chr1:18085798..18085805,+	p@chr1:18085798..18085805, +
7.05e-34	FFCP PHASE1:Hg19::chr17:48072063..48072074,-	p5@DLX3
7.05e-34	FFCP PHASE2:Hg19::chr3:177508111..177508119,-	p@chr3:177508111..177508119, -
7.05e-34	FFCP PHASE1:Hg19::chr13:28542963..28542973,-	p1@CU677005
7.05e-34	FFCP PHASE1:Hg19::chr3:193809263..193809278,+	p1@ENST00000457815
7.05e-34	FFCP PHASE2:Hg19::chr1:10980427..10980431,-	p@chr1:10980427..10980431, -
7.05e-34	FFCP PHASE1:Hg19::chr1:18085798..18085805,+	p@chr1:18085798..18085805, +
7.05e-34	FFCP PHASE1:Hg19::chr11:101454246..101454255,-	p11@TRPC6
7.05e-34	FFCP PHASE2:Hg19::chr19:51517875..51517889,-	p3@AK026045
7.05e-34	FFCP PHASE1:Hg19::chr3:177508111..177508119,-	p@chr3:177508111..177508119, -
7.05e-34	FFCP PHASE2:Hg19::chr11:101454246..101454255,-	p11@TRPC6
7.05e-34	FFCP PHASE2:Hg19::chr2:178179611..178179619,-	p4@ENST00000443132
7.05e-34	FFCP PHASE1:Hg19::chr1:10980427..10980431,-	p@chr1:10980427..10980431, -
7.05e-34	FFCP PHASE2:Hg19::chr3:193809263..193809278,+	p1@ENST00000457815
7.05e-34	FFCP PHASE2:Hg19::chr13:28542963..28542973,-	p1@CU677005
4.32e-26	FFCP PHASE1:Hg19::chr5:1884077..1884085,+	p1@ENST00000506335
4.32e-26	FFCP PHASE2:Hg19::chr4:73248974..73249005,+	p@chr4:73248974..73249005, +
4.32e-26	FFCP PHASE2:Hg19::chr16:55600644..55600645,+	p2@CAPNS2
4.32e-26	FFCP PHASE2:Hg19::chr1:151826151..151826159,-	p3@THEM5
4.32e-26	FFCP PHASE1:Hg19::chr4:73248974..73249005,+	p@chr4:73248974..73249005, +
4.32e-26	FFCP PHASE1:Hg19::chr16:55600644..55600645,+	p2@CAPNS2
4.32e-26	FFCP PHASE2:Hg19::chr5:1884077..1884085,+	p1@ENST00000506335
4.32e-26	FFCP PHASE1:Hg19::chr1:151826151..151826159,-	p3@THEM5
5.56e-26	FFCP PHASE1:Hg19::chr17:77774350..77774360,+	p@chr17:77774350..77774360, +
5.56e-26	FFCP PHASE1:Hg19::chr3:50367252..50367278,-	p@chr3:50367252..50367278, -
5.56e-26	FFCP PHASE1:Hg19::chr8:120233966..120233975,+	p@chr8:120233966..120233975, +
5.56e-26	FFCP PHASE1:Hg19::chr12:130647145..130647153,+	p3@FZD10
5.56e-26	FFCP PHASE2:Hg19::chr16:66906996..66906997,-	p@chr16:66906996..66906997, -
5.56e-26	FFCP PHASE2:Hg19::chr8:123875131..123875140,+	p25@ZHX2
5.56e-26	FFCP PHASE2:Hg19::chr6:152792772..152792787,-	p@chr6:152792772..152792787, -
5.56e-26	FFCP PHASE2:Hg19::chr12:130647145..130647153,+	p3@FZD10
5.56e-26	FFCP PHASE1:Hg19::chr16:66906996..66906997,-	p@chr16:66906996..66906997, -
5.56e-26	FFCP PHASE2:Hg19::chr1:86921028..86921032,+	p@chr1:86921028..86921032, +
5.56e-26	FFCP PHASE2:Hg19::chr7:101448204..101448229,+	p@chr7:101448204..101448229, +
5.56e-26	FFCP PHASE1:Hg19::chr6:152792772..152792787,-	p@chr6:152792772..152792787, -
5.56e-26	FFCP PHASE2:Hg19::chr3:50367252..50367278,-	p@chr3:50367252..50367278, -
5.56e-26	FFCP PHASE2:Hg19::chr8:120233966..120233975,+	p@chr8:120233966..120233975, +
5.56e-26	FFCP PHASE1:Hg19::chr8:123875131..123875140,+	p25@ZHX2
5.56e-26	FFCP PHASE1:Hg19::chr1:86921028..86921032,+	p@chr1:86921028..86921032, +
5.56e-26	FFCP PHASE1:Hg19::chr7:101448204..101448229,+	p@chr7:101448204..101448229, +
5.56e-26	FFCP PHASE2:Hg19::chr17:77774350..77774360,+	p@chr17:77774350..77774360, +
7.14e-26	FFCP PHASE2:Hg19::chr2:234526341..234526346,+	p1@UGT1A8
7.14e-26	FFCP PHASE1:Hg19::chr2:234526341..234526346,+	p1@UGT1A8
9.18e-26	FFCP PHASE1:Hg19::chr4:152117165..152117168,+	p@chr4:152117165..152117168, +
9.18e-26	FFCP PHASE1:Hg19::chr1:153430422..153430443,-	p3@S100A7
9.18e-26	FFCP PHASE1:Hg19::chr14:65406349..65406358,+	p@chr14:65406349..65406358, +
9.18e-26	FFCP PHASE2:Hg19::chr1:118570948..118570964,-	p@chr1:118570948..118570964, -
9.18e-26	FFCP PHASE1:Hg19::chr5:14437967..14437970,+	p@chr5:14437967..14437970, +
9.18e-26	FFCP PHASE2:Hg19::chr3:136885144..136885147,+	p@chr3:136885144..136885147, +
9.18e-26	FFCP PHASE1:Hg19::chr1:118570948..118570964,-	p@chr1:118570948..118570964, -
9.18e-26	FFCP PHASE1:Hg19::chr10:54259346..54259353,+	p@chr10:54259346..54259353, +
9.18e-26	FFCP PHASE2:Hg19::chr4:152117165..152117168,+	p@chr4:152117165..152117168, +
9.18e-26	FFCP PHASE2:Hg19::chr1:153430422..153430443,-	p3@S100A7
9.18e-26	FFCP PHASE2:Hg19::chr10:54259346..54259353,+	p@chr10:54259346..54259353, +
9.18e-26	FFCP PHASE2:Hg19::chr5:14437967..14437970,+	p@chr5:14437967..14437970, +
9.18e-26	FFCP PHASE1:Hg19::chr10:127591699..127591713,-	p@chr10:127591699..127591713, -
9.18e-26	FFCP PHASE2:Hg19::chr14:65406349..65406358,+	p@chr14:65406349..65406358, +
9.18e-26	FFCP PHASE1:Hg19::chr10:92754303..92754313,+	p2@ENST00000412362
9.18e-26	FFCP PHASE2:Hg19::chr10:127591699..127591713,-	p@chr10:127591699..127591713, -
9.18e-26	FFCP PHASE2:Hg19::chr10:92754303..92754313,+	p2@ENST00000412362
9.18e-26	FFCP PHASE1:Hg19::chr3:136885144..136885147,+	p@chr3:136885144..136885147, +
3.11e-21	FFCP PHASE1:Hg19::chr6:132455433..132455444,+	p4@ENST00000443303
3.11e-21	FFCP PHASE1:Hg19::chr1:152572708..152572714,+	p1@LCE3C
3.11e-21	FFCP PHASE1:Hg19::chr5:11385573..11385583,-	p47@CTNND2
3.11e-21	FFCP PHASE2:Hg19::chr4:75180763..75180777,+	p@chr4:75180763..75180777, +
3.11e-21	FFCP PHASE1:Hg19::chr10:5567644..5567657,+	p@chr10:5567644..5567657, +
3.11e-21	FFCP PHASE2:Hg19::chr10:5567644..5567657,+	p@chr10:5567644..5567657, +

Showing 1 to 100 of 100 entries