FFCP PHASE1:Hg19::chr1:6508100..6508152,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83715|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13281|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000461727,uc001amz.2_5end|description=CAGE_peak_2_at_ESPN_5end|id=chr1:6508100..6508152,+|ontology_enrichment_celltype=CL:0002322!6.78e-10!5;CL:0000181!6.55e-07!12;CL:0000417!6.55e-07!12;CL:0000668!6.55e-07!12;CL:0000414!6.55e-07!12;CL:0000412!6.55e-07!12;CL:0000182!6.55e-07!12|ontology_enrichment_celltype_v019=CL:0002322;1.22e-20;5!CL:0000123;1.38e-09;2!CL:0000242;1.38e-09;2!CL:0002535;1.78e-09;2!CL:0000182;1.17e-08;12!CL:0000540;5.13e-07;6!CL:0000404;5.13e-07;6|ontology_enrichment_celltype_v019_2=CL:0002322,1.27e-20,5;CL:0000242,1.24e-09,2;CL:0002535,1.74e-09,2;CL:0000182,1.20e-08,12;CL:0000540,5.29e-07,6;CL:0000031,5.29e-07,6;CL:0000404,5.29e-07,6|ontology_enrichment_development_v019=UBERON:0004161;9.17e-10;11!UBERON:0009497;3.33e-08;13!UBERON:0001041;6.14e-08;30!CL:0000031;5.13e-07;6|ontology_enrichment_disease=DOID:305!3.04e-09!106|ontology_enrichment_disease_v019=DOID:4362;2.48e-08;5|ontology_enrichment_disease_v019_2=DOID:305,1.04e-09,106;DOID:4362,2.42e-08,5;DOID:0050687,5.83e-07,143|ontology_enrichment_uberon=UBERON:0001007!3.82e-10!155;UBERON:0001555!3.82e-10!155;UBERON:0007026!3.82e-10!155;UBERON:0004119!1.57e-09!169;UBERON:0000925!1.57e-09!169;UBERON:0006595!1.57e-09!169;UBERON:0009497!2.10e-09!25;UBERON:0000015!2.10e-09!25;UBERON:0002423!2.10e-09!25;UBERON:0006235!2.10e-09!25;UBERON:0004161!2.10e-09!25;UBERON:0004921!2.94e-09!129;UBERON:0004185!2.94e-09!129;UBERON:0002368!1.19e-08!35;UBERON:0000466!1.63e-08!126;UBERON:0005911!2.12e-08!82;UBERON:0008835!9.01e-08!22;UBERON:0003894!9.01e-08!22;UBERON:0007499!1.04e-07!25;UBERON:0009854!2.57e-07!23;UBERON:0003929!2.65e-07!54;UBERON:0009856!2.67e-07!26;UBERON:0005172!3.11e-07!55;UBERON:0005173!3.11e-07!55;UBERON:0005057!6.24e-07!26|ontology_enrichment_uberon_v019=UBERON:0000002;2.22e-11;6!UBERON:0001560;2.22e-11;6!UBERON:0000160;7.64e-10;17!UBERON:0002423;1.18e-09;25!UBERON:0006955;1.78e-09;2!UBERON:0004801;1.78e-09;2!UBERON:0000007;3.99e-09;2!UBERON:0002368;2.89e-08;33!UBERON:0002108;1.22e-07;4!UBERON:0002107;1.61e-07;19!UBERON:0006925;1.61e-07;19!UBERON:0005409;1.68e-07;22!UBERON:0000922;3.79e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0000002,1.86e-11,6;UBERON:0001560,1.86e-11,6;UBERON:0000160,8.64e-10,17;UBERON:0009497,1.21e-09,25;UBERON:0000015,1.21e-09,25;UBERON:0002423,1.21e-09,25;UBERON:0006235,1.21e-09,25;UBERON:0004161,1.21e-09,25;UBERON:0006955,1.74e-09,2;UBERON:0004801,1.74e-09,2;UBERON:0000007,3.25e-09,2;UBERON:0008835,1.48e-08,22;UBERON:0003894,1.48e-08,22;UBERON:0009854,3.87e-08,23;UBERON:0002368,4.91e-08,35;UBERON:0002108,1.64e-07,4;UBERON:0002107,1.64e-07,19;UBERON:0006925,1.64e-07,19;UBERON:0008836,1.64e-07,19;UBERON:0007499,2.09e-07,25;UBERON:0009856,4.40e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0.393364276848904,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,3.53709686474248,0.822405995998037,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53723747775827,3.04818467139416,6.85544262930159,4.14644220061482,5.2987378683882,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.362578348774867,0,0,0,0,0,1.35359883872224,0.462092022626489,0,0,0.527758144464379,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.4993244732016,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0,0,0.718061155278177,4.99777910841237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.14994833854341,6.11030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,2.08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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000461727,uc001amz.2_5end | |||
|description=CAGE_peak_2_at_ESPN_5end | |||
|id=chr1:6508100..6508152,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.78e-10!5;CL:0000181!6.55e-07!12;CL:0000417!6.55e-07!12;CL:0000668!6.55e-07!12;CL:0000414!6.55e-07!12;CL:0000412!6.55e-07!12;CL:0000182!6.55e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.22e-20;5!CL:0000123;1.38e-09;2!CL:0000242;1.38e-09;2!CL:0002535;1.78e-09;2!CL:0000182;1.17e-08;12!CL:0000540;5.13e-07;6!CL:0000404;5.13e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.27e-20,5;CL:0000242,1.24e-09,2;CL:0002535,1.74e-09,2;CL:0000182,1.20e-08,12;CL:0000540,5.29e-07,6;CL:0000031,5.29e-07,6;CL:0000404,5.29e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.17e-10;11!UBERON:0009497;3.33e-08;13!UBERON:0001041;6.14e-08;30!CL:0000031;5.13e-07;6 | |||
|ontology_enrichment_disease=DOID:305!3.04e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:4362;2.48e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.04e-09,106;DOID:4362,2.42e-08,5;DOID:0050687,5.83e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.82e-10!155;UBERON:0001555!3.82e-10!155;UBERON:0007026!3.82e-10!155;UBERON:0004119!1.57e-09!169;UBERON:0000925!1.57e-09!169;UBERON:0006595!1.57e-09!169;UBERON:0009497!2.10e-09!25;UBERON:0000015!2.10e-09!25;UBERON:0002423!2.10e-09!25;UBERON:0006235!2.10e-09!25;UBERON:0004161!2.10e-09!25;UBERON:0004921!2.94e-09!129;UBERON:0004185!2.94e-09!129;UBERON:0002368!1.19e-08!35;UBERON:0000466!1.63e-08!126;UBERON:0005911!2.12e-08!82;UBERON:0008835!9.01e-08!22;UBERON:0003894!9.01e-08!22;UBERON:0007499!1.04e-07!25;UBERON:0009854!2.57e-07!23;UBERON:0003929!2.65e-07!54;UBERON:0009856!2.67e-07!26;UBERON:0005172!3.11e-07!55;UBERON:0005173!3.11e-07!55;UBERON:0005057!6.24e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;2.22e-11;6!UBERON:0001560;2.22e-11;6!UBERON:0000160;7.64e-10;17!UBERON:0002423;1.18e-09;25!UBERON:0006955;1.78e-09;2!UBERON:0004801;1.78e-09;2!UBERON:0000007;3.99e-09;2!UBERON:0002368;2.89e-08;33!UBERON:0002108;1.22e-07;4!UBERON:0002107;1.61e-07;19!UBERON:0006925;1.61e-07;19!UBERON:0005409;1.68e-07;22!UBERON:0000922;3.79e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,1.86e-11,6;UBERON:0001560,1.86e-11,6;UBERON:0000160,8.64e-10,17;UBERON:0009497,1.21e-09,25;UBERON:0000015,1.21e-09,25;UBERON:0002423,1.21e-09,25;UBERON:0006235,1.21e-09,25;UBERON:0004161,1.21e-09,25;UBERON:0006955,1.74e-09,2;UBERON:0004801,1.74e-09,2;UBERON:0000007,3.25e-09,2;UBERON:0008835,1.48e-08,22;UBERON:0003894,1.48e-08,22;UBERON:0009854,3.87e-08,23;UBERON:0002368,4.91e-08,35;UBERON:0002108,1.64e-07,4;UBERON:0002107,1.64e-07,19;UBERON:0006925,1.64e-07,19;UBERON:0008836,1.64e-07,19;UBERON:0007499,2.09e-07,25;UBERON:0009856,4.40e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0.393364276848904,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,3.53709686474248,0.822405995998037,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53723747775827,3.04818467139416,6.85544262930159,4.14644220061482,5.2987378683882,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.362578348774867,0,0,0,0,0,1.35359883872224,0.462092022626489,0,0,0.527758144464379,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.4993244732016,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0,0,0.718061155278177,4.99777910841237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.14994833854341,6.11030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,2.08942095792966,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,7.62650392665732,0.561111741760736,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,11.6495949527454,8.03588459533681,7.41742725430498,7.75140754323126,0,0,0,0,7.5553979778559,8.25236619583403,6.23160507043778,0,0,0,0,0,0.209818352539992,0,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,0.439656701034247,10.6005511129777,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0.487170393523584,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,7.96169339871699,6.81128834470878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,5.17496301759658,0,0,0,0,0,0,0,0,0.511049710558381,0,0,3.64179362541979,3.87025725297206,0,0,0,0,0,0,1.66847102838104,0.156986185701028,0,2.80272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0.971421986118279,25.9672804442937,1.19370465096821,0,0,0,25.5127205627678,0.540219106755613,1.09279780251979,8.93602863086893,0,0,0,0,0,0,0,0.128915775947154,0,0,0,44.2129930457317,0.730336388246517,0,0,0.157771562193185,0,0,1.0580536810308,0,0,0,0,0.218531143927391,0,2.03977659483963,0.26721740526556,3.40011128278926,0,0.0757786982182394,0,0,0,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,1.0105859447911,0,0,0,0.286888821570705,0,0.569822880276821,0,0,0,0,0.244482888365733,2.03448089157869,0,0,0 | |||
|short_description=p2@ESPN | |||
}} |
Revision as of 06:25, 12 September 2013
Short description: | p2@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ESPN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000461727, uc001amz.2_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.27e-20 | 5 |
Merkel cell | 1.24e-09 | 2 |
epithelial cell of cervix | 1.74e-09 | 2 |
hepatocyte | 1.20e-08 | 12 |
neuron | 5.29e-07 | 6 |
neuroblast | 5.29e-07 | 6 |
electrically signaling cell | 5.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 1.86e-11 | 6 |
neck of organ | 1.86e-11 | 6 |
intestine | 8.64e-10 | 17 |
epithelium of foregut-midgut junction | 1.21e-09 | 25 |
anatomical boundary | 1.21e-09 | 25 |
hepatobiliary system | 1.21e-09 | 25 |
foregut-midgut junction | 1.21e-09 | 25 |
septum transversum | 1.21e-09 | 25 |
uterine epithelium | 1.74e-09 | 2 |
cervix epithelium | 1.74e-09 | 2 |
pituitary gland | 3.25e-09 | 2 |
hepatic diverticulum | 1.48e-08 | 22 |
liver primordium | 1.48e-08 | 22 |
digestive tract diverticulum | 3.87e-08 | 23 |
endocrine gland | 4.91e-08 | 35 |
small intestine | 1.64e-07 | 4 |
liver | 1.64e-07 | 19 |
digestive gland | 1.64e-07 | 19 |
liver bud | 1.64e-07 | 19 |
epithelial sac | 2.09e-07 | 25 |
sac | 4.40e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.04e-09 | 106 |
cervical cancer | 2.42e-08 | 5 |
cell type cancer | 5.83e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.