FFCP PHASE1:Hg19::chr19:51814892..51814930,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=402665|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=34550|TSSclassifier=S|UniProt=A6NGN9|association_with_transcript=-171bp_to_ENST00000270642,NM_001101372,uc002pwc.2_5end|coexpression_cluster_id=C702|description=CAGE_peak_1_at_IGLON5_5end|id=chr19:51814892..51814930,+|ontology_enrichment_celltype=CL:0000047!3.83e-12!8;CL:0000540!1.01e-09!6;CL:0000031!1.01e-09!6;CL:0000404!1.01e-09!6;CL:0002322!5.87e-08!5;CL:0002319!5.03e-07!25|ontology_enrichment_celltype_v019=CL:0000540;9.84e-14;6!CL:0000404;9.84e-14;6!CL:0002322;4.51e-11;5|ontology_enrichment_celltype_v019_2=CL:0000047,2.34e-17,8;CL:0000540,9.63e-14,6;CL:0000031,9.63e-14,6;CL:0000404,9.63e-14,6;CL:0002322,4.10e-11,5|ontology_enrichment_development_v019=UBERON:0006601;1.99e-15;82!CL:0000031;9.84e-14;6!UBERON:0006215;3.00e-08;3!UBERON:0006241;1.16e-07;3!UBERON:0003057;1.16e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.25e-64!82;UBERON:0005743!1.64e-62!86;UBERON:0001049!2.11e-60!57;UBERON:0005068!2.11e-60!57;UBERON:0006241!2.11e-60!57;UBERON:0007135!2.11e-60!57;UBERON:0000073!6.56e-60!94;UBERON:0001016!6.56e-60!94;UBERON:0002616!5.57e-52!59;UBERON:0002346!6.66e-49!90;UBERON:0003075!2.89e-48!86;UBERON:0007284!2.89e-48!86;UBERON:0000955!1.77e-47!69;UBERON:0006238!1.77e-47!69;UBERON:0002780!9.23e-42!41;UBERON:0001890!9.23e-42!41;UBERON:0006240!9.23e-42!41;UBERON:0003080!1.84e-40!42;UBERON:0002020!1.46e-39!34;UBERON:0003528!1.46e-39!34;UBERON:0001893!8.20e-39!34;UBERON:0002791!1.32e-37!33;UBERON:0001869!9.32e-37!32;UBERON:0007023!3.68e-34!115;UBERON:0000924!5.80e-33!173;UBERON:0006601!5.80e-33!173;UBERON:0004121!5.80e-32!169;UBERON:0000956!1.59e-28!25;UBERON:0000203!1.59e-28!25;UBERON:0003056!1.79e-28!61;UBERON:0002619!2.72e-28!22;UBERON:0001950!1.55e-25!20;UBERON:0000033!4.72e-24!123;UBERON:0000153!5.23e-24!129;UBERON:0007811!5.23e-24!129;UBERON:0003076!1.07e-20!15;UBERON:0003057!1.07e-20!15;UBERON:0004732!9.68e-18!13;UBERON:0004733!1.11e-16!12;UBERON:0002028!1.11e-16!12;UBERON:0007277!1.11e-16!12;UBERON:0000025!2.17e-13!194;UBERON:0002680!6.89e-13!9;UBERON:0001895!6.89e-13!9;UBERON:0010092!6.89e-13!9;UBERON:0002308!2.22e-12!9;UBERON:0000125!2.22e-12!9;UBERON:0002420!4.45e-12!9;UBERON:0007245!4.45e-12!9;UBERON:0010009!4.45e-12!9;UBERON:0010011!4.45e-12!9;UBERON:0000454!4.45e-12!9;UBERON:0009663!1.73e-09!7;UBERON:0001871!3.01e-09!7;UBERON:0002298!3.36e-09!8;UBERON:0000200!3.54e-09!6;UBERON:0004111!1.12e-08!241;UBERON:0002037!1.40e-08!6;UBERON:0006215!1.40e-08!6;UBERON:0002021!2.81e-08!5;UBERON:0000349!5.01e-08!5;UBERON:0001872!5.23e-08!5;UBERON:0000922!1.10e-07!612|ontology_enrichment_uberon_v019=UBERON:0003528;4.45e-44;34!UBERON:0002020;4.45e-44;34!UBERON:0001893;1.75e-43;34!UBERON:0001869;4.61e-43;32!UBERON:0000073;5.82e-43;53!UBERON:0002616;5.82e-43;53!UBERON:0002791;6.91e-43;32!UBERON:0002619;6.84e-42;22!UBERON:0002780;2.69e-40;41!UBERON:0001890;2.69e-40;41!UBERON:0001950;9.23e-38;20!UBERON:0000956;2.98e-36;25!UBERON:0000203;2.98e-36;25!UBERON:0001017;1.50e-29;75!UBERON:0000955;2.68e-29;68!UBERON:0001016;3.57e-26;83!UBERON:0004732;1.08e-22;13!UBERON:0004733;4.41e-21;12!UBERON:0002028;4.41e-21;12!UBERON:0000125;9.73e-18;9!UBERON:0002308;9.73e-18;9!UBERON:0002420;2.76e-17;9!UBERON:0007245;2.76e-17;9!UBERON:0010009;2.76e-17;9!UBERON:0010011;2.76e-17;9!UBERON:0000454;2.76e-17;9!UBERON:0002680;1.83e-15;9!UBERON:0001895;1.83e-15;9!UBERON:0002298;8.35e-14;6!UBERON:0009663;1.99e-13;7!UBERON:0000200;6.59e-13;6!UBERON:0002021;1.23e-11;5!UBERON:0007023;1.60e-11;114!UBERON:0001871;2.93e-11;6!UBERON:0001872;3.42e-11;5!UBERON:0000349;3.57e-11;5!UBERON:0011216;7.24e-10;132!UBERON:0002037;3.26e-09;6!UBERON:0000922;1.87e-08;49!UBERON:0000988;3.64e-08;3!UBERON:0002784;3.76e-08;4!UBERON:0000369;4.24e-08;4!UBERON:0002435;4.24e-08;4!UBERON:0000204;4.24e-08;4!UBERON:0002240;1.16e-07;3!UBERON:0005174;1.16e-07;3!UBERON:0001137;1.16e-07;3!UBERON:0001896;2.54e-07;3!UBERON:0005290;2.54e-07;3!UBERON:0001870;4.28e-07;3!UBERON:0001894;6.08e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.74e-87,81;UBERON:0001049,1.87e-83,56;UBERON:0005068,1.87e-83,56;UBERON:0006241,1.87e-83,56;UBERON:0007135,1.87e-83,56;UBERON:0001016,3.34e-82,89;UBERON:0000073,3.66e-77,53;UBERON:0002616,3.66e-77,53;UBERON:0000955,5.47e-65,68;UBERON:0006238,5.47e-65,68;UBERON:0002346,4.45e-61,86;UBERON:0003075,1.11e-59,82;UBERON:0007284,1.11e-59,82;UBERON:0002780,1.29e-56,41;UBERON:0001890,1.29e-56,41;UBERON:0003080,1.29e-56,41;UBERON:0006240,1.29e-56,41;UBERON:0003528,1.62e-52,34;UBERON:0002020,1.62e-52,34;UBERON:0001893,1.87e-51,34;UBERON:0001869,2.22e-48,32;UBERON:0002791,3.72e-48,32;UBERON:0010371,1.12e-45,104;UBERON:0004121,4.62e-42,171;UBERON:0000924,4.62e-42,171;UBERON:0006601,4.62e-42,171;UBERON:0002619,8.15e-42,22;UBERON:0003056,1.97e-41,61;UBERON:0001950,1.11e-37,20;UBERON:0000956,3.48e-36,25;UBERON:0000203,3.48e-36,25;UBERON:000702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0,0.154348316215889,0.437119121007915,0,0,0,25.5201007249429,4.45569600490629,25.7819993825874,0,0,0,0,0,0,0,0,0,2.15009374727177,0,8.43094478367342,26.1810414204226,0,0,0.462175628631418,0,0.126166424835079,3.82429501872934,0,11.116782441876,10.6886962106224,0,3.76061308938563,2.19758224832894,4.28742608249886,13.2667110313405,4.75791780964718,0.213233981900981,1.1903221573187,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0|short_description=p1@IGLON5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=402665 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34550 | |||
|TSSclassifier=S | |||
|UniProt=A6NGN9 | |||
|association_with_transcript=-171bp_to_ENST00000270642,NM_001101372,uc002pwc.2_5end | |||
|coexpression_cluster_id=C702 | |||
|description=CAGE_peak_1_at_IGLON5_5end | |||
|id=chr19:51814892..51814930,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.83e-12!8;CL:0000540!1.01e-09!6;CL:0000031!1.01e-09!6;CL:0000404!1.01e-09!6;CL:0002322!5.87e-08!5;CL:0002319!5.03e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.84e-14;6!CL:0000404;9.84e-14;6!CL:0002322;4.51e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.34e-17,8;CL:0000540,9.63e-14,6;CL:0000031,9.63e-14,6;CL:0000404,9.63e-14,6;CL:0002322,4.10e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.99e-15;82!CL:0000031;9.84e-14;6!UBERON:0006215;3.00e-08;3!UBERON:0006241;1.16e-07;3!UBERON:0003057;1.16e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@IGLON5 | |||
}} |
Revision as of 22:04, 11 September 2013
Short description: | p1@IGLON5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IGLON5_5end |
Coexpression cluster: | C702_spinal_parietal_Neural_occipital_locus_temporal_globus |
Association with transcript: | -171bp_to_ENST00000270642, NM_001101372, uc002pwc.2_5end |
EntrezGene: | IGLON5 |
HGNC: | 34550 |
UniProt: | A6NGN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.34e-17 | 8 |
neuron | 9.63e-14 | 6 |
neuroblast | 9.63e-14 | 6 |
electrically signaling cell | 9.63e-14 | 6 |
embryonic stem cell | 4.10e-11 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.