FFCP PHASE1:Hg19::chr19:40919278..40919294,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57716|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13797|TSSclassifier=W|UniProt=C9JI63|association_with_transcript=-5bp_to_ENST00000341562_5end|coexpression_cluster_id=C291|description=CAGE_peak_2_at_PRX_5end|id=chr19:40919278..40919294,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;2.34e-07;5|ontology_enrichment_celltype_v019_2=CL:0002322,2.93e-07,5|ontology_enrichment_development_v019=UBERON:0006601;8.54e-16;82!UBERON:0002532;1.60e-07;206!UBERON:0010316;1.60e-07;206!UBERON:0006241;6.14e-07;3!UBERON:0003057;6.14e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.34e-79!115;UBERON:0001049!7.24e-49!57;UBERON:0005068!7.24e-49!57;UBERON:0006241!7.24e-49!57;UBERON:0007135!7.24e-49!57;UBERON:0001017!2.33e-41!82;UBERON:0005743!2.17e-40!86;UBERON:0002616!1.52e-39!59;UBERON:0003075!7.25e-39!86;UBERON:0007284!7.25e-39!86;UBERON:0002346!1.81e-37!90;UBERON:0000955!7.72e-37!69;UBERON:0006238!7.72e-37!69;UBERON:0000073!2.86e-36!94;UBERON:0001016!2.86e-36!94;UBERON:0003080!2.32e-34!42;UBERON:0002780!1.54e-33!41;UBERON:0001890!1.54e-33!41;UBERON:0006240!1.54e-33!41;UBERON:0002020!2.51e-29!34;UBERON:0003528!2.51e-29!34;UBERON:0001893!4.97e-29!34;UBERON:0002791!5.42e-28!33;UBERON:0001869!8.00e-27!32;UBERON:0003056!7.10e-25!61;UBERON:0000153!1.48e-24!129;UBERON:0007811!1.48e-24!129;UBERON:0000033!1.95e-23!123;UBERON:0004121!6.37e-23!169;UBERON:0002619!7.36e-23!22;UBERON:0000924!1.38e-22!173;UBERON:0006601!1.38e-22!173;UBERON:0001950!1.60e-20!20;UBERON:0000956!2.47e-19!25;UBERON:0000203!2.47e-19!25;UBERON:0003076!2.82e-15!15;UBERON:0003057!2.82e-15!15;UBERON:0004732!1.46e-12!13;UBERON:0002420!5.85e-12!9;UBERON:0007245!5.85e-12!9;UBERON:0010009!5.85e-12!9;UBERON:0010011!5.85e-12!9;UBERON:0000454!5.85e-12!9;UBERON:0002308!9.20e-12!9;UBERON:0000125!9.20e-12!9;UBERON:0004733!2.26e-11!12;UBERON:0002028!2.26e-11!12;UBERON:0007277!2.26e-11!12;UBERON:0002298!4.91e-11!8;UBERON:0009663!1.45e-09!7;UBERON:0000025!1.56e-09!194;UBERON:0004111!2.26e-09!241;UBERON:0000062!3.98e-08!511;UBERON:0000200!5.87e-08!6;UBERON:0001871!7.40e-08!7;UBERON:0000064!8.46e-08!219;UBERON:0002680!1.22e-07!9;UBERON:0001895!1.22e-07!9;UBERON:0010092!1.22e-07!9;UBERON:0000477!1.36e-07!286;UBERON:0000349!2.31e-07!5;UBERON:0000922!4.91e-07!612;UBERON:0000481!5.70e-07!347;UBERON:0000475!6.17e-07!365;UBERON:0003135!6.31e-07!11|ontology_enrichment_uberon_v019=UBERON:0003528;2.53e-32;34!UBERON:0002020;2.53e-32;34!UBERON:0001893;1.49e-31;34!UBERON:0002791;1.71e-31;32!UBERON:0001869;4.00e-31;32!UBERON:0002780;4.68e-31;41!UBERON:0001890;4.68e-31;41!UBERON:0000073;5.23e-30;53!UBERON:0002616;5.23e-30;53!UBERON:0002619;2.32e-29;22!UBERON:0001950;2.30e-26;20!UBERON:0000956;3.57e-25;25!UBERON:0000203;3.57e-25;25!UBERON:0007023;6.65e-21;114!UBERON:0001017;6.60e-18;75!UBERON:0000955;8.95e-18;68!UBERON:0001016;5.85e-16;83!UBERON:0002420;4.71e-15;9!UBERON:0007245;4.71e-15;9!UBERON:0010009;4.71e-15;9!UBERON:0010011;4.71e-15;9!UBERON:0000454;4.71e-15;9!UBERON:0000125;6.82e-15;9!UBERON:0002308;6.82e-15;9!UBERON:0009663;5.62e-12;7!UBERON:0004732;6.41e-12;13!UBERON:0002298;3.07e-11;6!UBERON:0004733;1.86e-10;12!UBERON:0002028;1.86e-10;12!UBERON:0000200;7.42e-10;6!UBERON:0000922;2.20e-09;49!UBERON:0000349;4.86e-09;5!UBERON:0001871;1.59e-08;6!UBERON:0001872;4.78e-08;5!UBERON:0002021;6.60e-08;5!UBERON:0011216;1.62e-07;132!UBERON:0001894;2.26e-07;7!UBERON:0000369;2.67e-07;4!UBERON:0002435;2.67e-07;4!UBERON:0000204;2.67e-07;4!UBERON:0002240;6.14e-07;3!UBERON:0005174;6.14e-07;3!UBERON:0001137;6.14e-07;3!UBERON:0001896;8.11e-07;3!UBERON:0005290;8.11e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.46e-79,114;UBERON:0001049,1.44e-58,56;UBERON:0005068,1.44e-58,56;UBERON:0006241,1.44e-58,56;UBERON:0007135,1.44e-58,56;UBERON:0000073,2.58e-53,53;UBERON:0002616,2.58e-53,53;UBERON:0001017,3.66e-48,81;UBERON:0002780,5.61e-44,41;UBERON:0001890,5.61e-44,41;UBERON:0003080,5.61e-44,41;UBERON:0006240,5.61e-44,41;UBERON:0001016,9.90e-44,89;UBERON:0003075,7.73e-43,82;UBERON:0007284,7.73e-43,82;UBERON:0000955,1.21e-41,68;UBERON:0006238,1.21e-41,68;UBERON:0002346,4.31e-40,86;UBERON:0003528,2.44e-38,34;UBERON:0002020,2.44e-38,34;UBERON:0001893,6.01e-38,34;UBERON:0002791,1.91e-35,32;UBERON:0001869,4.64e-35,32;UBERON:0010371,5.09e-32,104;UBERON:0010314,2.31e-30,132;UBERON:0003056,6.54e-30,61;UBERON:0002619,1.87e-29,22;UBERON:0001950,2.09e-26,20;UBERON:0000956,2.95e-25,25;UBERON:0000203,2.95e-25,25;UBERON:0004121,9.33e-24,171;UBERON:0000924,9.33e-24,171;UBERON:0006601,9.33e-24,171;UBERON:0011216,3.97e-22,223;UBERON:0003076,3.73e-15,15;UBERON:0003057,3.73e-15,15;UBERON:0002420,4.35e-15,9;UBERON:0007245,4.35e-15,9;UBERON:0010009,4.35e-15,9;UBERON:0010011,4.35e-15,9;UBERON:0000454,4.35e-15,9;UBERON:0000125,7.84e-15,9;UBERON:0002308,7.84e-15,9;UBERON:0004111,3.63e-14,240;UBERON:0000025,6.92e-14,192;UBERON:0009663,5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13797 | |||
|TSSclassifier=W | |||
|UniProt=C9JI63 | |||
|association_with_transcript=-5bp_to_ENST00000341562_5end | |||
|coexpression_cluster_id=C291 | |||
|description=CAGE_peak_2_at_PRX_5end | |||
|id=chr19:40919278..40919294,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.34e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.93e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.54e-16;82!UBERON:0002532;1.60e-07;206!UBERON:0010316;1.60e-07;206!UBERON:0006241;6.14e-07;3!UBERON:0003057;6.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.34e-79!115;UBERON:0001049!7.24e-49!57;UBERON:0005068!7.24e-49!57;UBERON:0006241!7.24e-49!57;UBERON:0007135!7.24e-49!57;UBERON:0001017!2.33e-41!82;UBERON:0005743!2.17e-40!86;UBERON:0002616!1.52e-39!59;UBERON:0003075!7.25e-39!86;UBERON:0007284!7.25e-39!86;UBERON:0002346!1.81e-37!90;UBERON:0000955!7.72e-37!69;UBERON:0006238!7.72e-37!69;UBERON:0000073!2.86e-36!94;UBERON:0001016!2.86e-36!94;UBERON:0003080!2.32e-34!42;UBERON:0002780!1.54e-33!41;UBERON:0001890!1.54e-33!41;UBERON:0006240!1.54e-33!41;UBERON:0002020!2.51e-29!34;UBERON:0003528!2.51e-29!34;UBERON:0001893!4.97e-29!34;UBERON:0002791!5.42e-28!33;UBERON:0001869!8.00e-27!32;UBERON:0003056!7.10e-25!61;UBERON:0000153!1.48e-24!129;UBERON:0007811!1.48e-24!129;UBERON:0000033!1.95e-23!123;UBERON:0004121!6.37e-23!169;UBERON:0002619!7.36e-23!22;UBERON:0000924!1.38e-22!173;UBERON:0006601!1.38e-22!173;UBERON:0001950!1.60e-20!20;UBERON:0000956!2.47e-19!25;UBERON:0000203!2.47e-19!25;UBERON:0003076!2.82e-15!15;UBERON:0003057!2.82e-15!15;UBERON:0004732!1.46e-12!13;UBERON:0002420!5.85e-12!9;UBERON:0007245!5.85e-12!9;UBERON:0010009!5.85e-12!9;UBERON:0010011!5.85e-12!9;UBERON:0000454!5.85e-12!9;UBERON:0002308!9.20e-12!9;UBERON:0000125!9.20e-12!9;UBERON:0004733!2.26e-11!12;UBERON:0002028!2.26e-11!12;UBERON:0007277!2.26e-11!12;UBERON:0002298!4.91e-11!8;UBERON:0009663!1.45e-09!7;UBERON:0000025!1.56e-09!194;UBERON:0004111!2.26e-09!241;UBERON:0000062!3.98e-08!511;UBERON:0000200!5.87e-08!6;UBERON:0001871!7.40e-08!7;UBERON:0000064!8.46e-08!219;UBERON:0002680!1.22e-07!9;UBERON:0001895!1.22e-07!9;UBERON:0010092!1.22e-07!9;UBERON:0000477!1.36e-07!286;UBERON:0000349!2.31e-07!5;UBERON:0000922!4.91e-07!612;UBERON:0000481!5.70e-07!347;UBERON:0000475!6.17e-07!365;UBERON:0003135!6.31e-07!11 | |||
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|short_description=p2@PRX | |||
}} |
Revision as of 20:41, 11 September 2013
Short description: | p2@PRX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PRX_5end |
Coexpression cluster: | C291_spinal_substantia_retina_medulla_tongue_skeletal_trachea |
Association with transcript: | -5bp_to_ENST00000341562_5end |
EntrezGene: | PRX |
HGNC: | 13797 |
UniProt: | C9JI63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.93e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.