FFCP PHASE1:Hg19::chr18:61442875..61442885,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8710|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13902|TSSclassifier=N|UniProt=F5GZC0|association_with_transcript=220bp_to_ENST00000540675_5end|coexpression_cluster_id=C38|description=CAGE_peak_12_at_SERPINB7_5end|id=chr18:61442875..61442885,+|ontology_enrichment_celltype=CL:0002620!8.73e-17!23;CL:0000057!1.18e-08!75;CL:0002537!1.06e-07!5|ontology_enrichment_celltype_v019=CL:0002537;1.02e-23;5!CL:0002615;9.43e-11;3!CL:0002579;1.14e-10;3!CL:0000349;5.66e-07;19|ontology_enrichment_celltype_v019_2=CL:0002537,1.02e-23,5;CL:0002615,9.90e-11,3;CL:0002579,1.20e-10,3;CL:0000349,5.66e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;7.48e-30;1!DOID:4549;7.48e-30;1!DOID:5861;7.48e-30;1!DOID:6496;7.48e-30;1!DOID:4468;2.55e-15;2|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1;DOID:4468,2.37e-15,2|ontology_enrichment_uberon=UBERON:0002097!3.39e-14!40;UBERON:0002199!2.90e-12!45;UBERON:0002416!2.90e-12!45;UBERON:0003688!2.80e-10!6;UBERON:0002358!2.80e-10!6;UBERON:0003684!2.80e-10!6;UBERON:0001178!2.80e-10!6;UBERON:0005631!2.25e-09!14;UBERON:0000158!2.25e-09!14;UBERON:0004923!7.28e-07!57;UBERON:0003102!9.67e-07!95|ontology_enrichment_uberon_v019=UBERON:0003688;1.04e-19;6!UBERON:0002358;1.04e-19;6!UBERON:0003684;1.04e-19;6!UBERON:0001178;1.04e-19;6!UBERON:0000305;2.90e-17;7!UBERON:0004457;1.69e-13;9!UBERON:0000042;1.69e-13;9!UBERON:0005631;2.12e-12;10!UBERON:0000158;2.12e-12;10!UBERON:0002418;6.73e-11;3!UBERON:0004755;6.73e-11;3|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.15e-19,6;UBERON:0002358,1.15e-19,6;UBERON:0003684,1.15e-19,6;UBERON:0001178,1.15e-19,6;UBERON:0000305,2.90e-17,7;UBERON:0004871,3.06e-15,8;UBERON:0002418,6.73e-11,3;UBERON:0004755,6.73e-11,3;UBERON:0004457,2.34e-10,12;UBERON:0000042,2.34e-10,12;UBERON:0005631,3.88e-09,14;UBERON:0000158,3.88e-09,14;UBERON:0004923,2.46e-07,66|phase1_expression=0.54503513781167,0,0.140954404095971,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0.37223371266318,0.337552664482532,0.194874010322397,0,0.276149695926898,0,0.710019185033229,0.403008392910561,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0,0,1.02341449813341,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0.593929361665277,4.60741053148848,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.343972064943233,0,0,0,0,9.70817393606503,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p12@SERPINB7}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13902 | |||
|TSSclassifier=N | |||
|UniProt=F5GZC0 | |||
|association_with_transcript=220bp_to_ENST00000540675_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_12_at_SERPINB7_5end | |||
|id=chr18:61442875..61442885,+ | |||
|ontology_enrichment_celltype=CL:0002620!8.73e-17!23;CL:0000057!1.18e-08!75;CL:0002537!1.06e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.02e-23;5!CL:0002615;9.43e-11;3!CL:0002579;1.14e-10;3!CL:0000349;5.66e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.02e-23,5;CL:0002615,9.90e-11,3;CL:0002579,1.20e-10,3;CL:0000349,5.66e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.48e-30;1!DOID:4549;7.48e-30;1!DOID:5861;7.48e-30;1!DOID:6496;7.48e-30;1!DOID:4468;2.55e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1;DOID:4468,2.37e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.39e-14!40;UBERON:0002199!2.90e-12!45;UBERON:0002416!2.90e-12!45;UBERON:0003688!2.80e-10!6;UBERON:0002358!2.80e-10!6;UBERON:0003684!2.80e-10!6;UBERON:0001178!2.80e-10!6;UBERON:0005631!2.25e-09!14;UBERON:0000158!2.25e-09!14;UBERON:0004923!7.28e-07!57;UBERON:0003102!9.67e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.04e-19;6!UBERON:0002358;1.04e-19;6!UBERON:0003684;1.04e-19;6!UBERON:0001178;1.04e-19;6!UBERON:0000305;2.90e-17;7!UBERON:0004457;1.69e-13;9!UBERON:0000042;1.69e-13;9!UBERON:0005631;2.12e-12;10!UBERON:0000158;2.12e-12;10!UBERON:0002418;6.73e-11;3!UBERON:0004755;6.73e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.15e-19,6;UBERON:0002358,1.15e-19,6;UBERON:0003684,1.15e-19,6;UBERON:0001178,1.15e-19,6;UBERON:0000305,2.90e-17,7;UBERON:0004871,3.06e-15,8;UBERON:0002418,6.73e-11,3;UBERON:0004755,6.73e-11,3;UBERON:0004457,2.34e-10,12;UBERON:0000042,2.34e-10,12;UBERON:0005631,3.88e-09,14;UBERON:0000158,3.88e-09,14;UBERON:0004923,2.46e-07,66 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0.37223371266318,0.337552664482532,0.194874010322397,0,0.276149695926898,0,0.710019185033229,0.403008392910561,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0,0,1.02341449813341,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0.593929361665277,4.60741053148848,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.343972064943233,0,0,0,0,9.70817393606503,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p12@SERPINB7 | |||
}} |
Revision as of 18:01, 11 September 2013
Short description: | p12@SERPINB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SERPINB7_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 220bp_to_ENST00000540675_5end |
EntrezGene: | SERPINB7 |
HGNC: | 13902 |
UniProt: | F5GZC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.02e-23 | 5 |
adipocyte of omentum tissue | 9.90e-11 | 3 |
omentum preadipocyte | 1.20e-10 | 3 |
extraembryonic cell | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.15e-19 | 6 |
peritoneum | 1.15e-19 | 6 |
abdominal cavity | 1.15e-19 | 6 |
visceral peritoneum | 1.15e-19 | 6 |
amnion | 2.90e-17 | 7 |
somatic layer of lateral plate mesoderm | 3.06e-15 | 8 |
cartilage tissue | 6.73e-11 | 3 |
skeletal tissue | 6.73e-11 | 3 |
cavity lining | 2.34e-10 | 12 |
serous membrane | 2.34e-10 | 12 |
extraembryonic membrane | 3.88e-09 | 14 |
membranous layer | 3.88e-09 | 14 |
organ component layer | 2.46e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.48e-30 | 1 |
extraosseous chondrosarcoma | 7.48e-30 | 1 |
myxoid chondrosarcoma | 7.48e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 7.48e-30 | 1 |
clear cell adenocarcinoma | 2.37e-15 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.