FFCP PHASE1:Hg19::chr18:40857484..40857491,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6860|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11512|TSSclassifier=S|UniProt=|association_with_transcript=8bp_to_uc010dnh.2_5end|coexpression_cluster_id=C759|description=CAGE_peak_9_at_SYT4_5end|id=chr18:40857484..40857491,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000123;1.73e-07;2!CL:0000242;1.73e-07;2|ontology_enrichment_celltype_v019_2=CL:0000242,1.50e-07,2|ontology_enrichment_development_v019=UBERON:0006601;9.06e-16;82!UBERON:0006215;2.90e-10;3!UBERON:0010122;1.73e-07;2|ontology_enrichment_disease=DOID:171!9.26e-08!10;DOID:169!9.59e-07!6|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.14e-82!57;UBERON:0005068!2.14e-82!57;UBERON:0006241!2.14e-82!57;UBERON:0007135!2.14e-82!57;UBERON:0001017!1.02e-80!82;UBERON:0005743!4.10e-79!86;UBERON:0000073!7.53e-79!94;UBERON:0001016!7.53e-79!94;UBERON:0002616!3.43e-69!59;UBERON:0000955!3.39e-68!69;UBERON:0006238!3.39e-68!69;UBERON:0002780!9.23e-66!41;UBERON:0001890!9.23e-66!41;UBERON:0006240!9.23e-66!41;UBERON:0003080!5.70e-64!42;UBERON:0002346!5.64e-59!90;UBERON:0003075!1.73e-57!86;UBERON:0007284!1.73e-57!86;UBERON:0001869!1.09e-54!32;UBERON:0001893!1.44e-54!34;UBERON:0002020!2.79e-54!34;UBERON:0003528!2.79e-54!34;UBERON:0002791!2.81e-52!33;UBERON:0002619!4.26e-46!22;UBERON:0000924!1.35e-43!173;UBERON:0006601!1.35e-43!173;UBERON:0003056!2.32e-43!61;UBERON:0001950!5.35e-42!20;UBERON:0004121!6.71e-42!169;UBERON:0000956!5.44e-40!25;UBERON:0000203!5.44e-40!25;UBERON:0007023!1.62e-39!115;UBERON:0000033!6.43e-36!123;UBERON:0000153!1.30e-33!129;UBERON:0007811!1.30e-33!129;UBERON:0000025!6.15e-19!194;UBERON:0003076!1.18e-18!15;UBERON:0003057!1.18e-18!15;UBERON:0002420!5.97e-16!9;UBERON:0007245!5.97e-16!9;UBERON:0010009!5.97e-16!9;UBERON:0010011!5.97e-16!9;UBERON:0000454!5.97e-16!9;UBERON:0002308!1.91e-15!9;UBERON:0000125!1.91e-15!9;UBERON:0000200!4.78e-14!6;UBERON:0001871!6.96e-14!7;UBERON:0004733!1.40e-13!12;UBERON:0002028!1.40e-13!12;UBERON:0007277!1.40e-13!12;UBERON:0004111!1.22e-12!241;UBERON:0001872!1.53e-12!5;UBERON:0002021!1.68e-12!5;UBERON:0004732!2.14e-12!13;UBERON:0001894!2.90e-12!7;UBERON:0006222!2.90e-12!7;UBERON:0000349!3.91e-12!5;UBERON:0009663!7.75e-12!7;UBERON:0003296!6.72e-11!4;UBERON:0010133!6.72e-11!4;UBERON:0000483!1.15e-10!309;UBERON:0000119!1.98e-10!312;UBERON:0000369!3.14e-10!4;UBERON:0002435!3.14e-10!4;UBERON:0000204!3.14e-10!4;UBERON:0010082!3.14e-10!4;UBERON:0000064!9.73e-10!219;UBERON:0002298!2.68e-09!8;UBERON:0000477!2.74e-09!286;UBERON:0002680!8.78e-09!9;UBERON:0001895!8.78e-09!9;UBERON:0010092!8.78e-09!9;UBERON:0005383!5.43e-08!3;UBERON:0005382!5.43e-08!3;UBERON:0000475!6.47e-08!365;UBERON:0002771!1.54e-07!3;UBERON:0000988!1.85e-07!3;UBERON:0002240!5.50e-07!3;UBERON:0001896!7.78e-07!3;UBERON:0005290!7.78e-07!3;UBERON:0010096!7.78e-07!3|ontology_enrichment_uberon_v019=UBERON:0001869;8.89e-61;32!UBERON:0002619;1.39e-59;22!UBERON:0001950;2.86e-59;20!UBERON:0002791;1.73e-56;32!UBERON:0003528;7.52e-56;34!UBERON:0002020;7.52e-56;34!UBERON:0001893;1.47e-55;34!UBERON:0000956;4.72e-52;25!UBERON:0000203;4.72e-52;25!UBERON:0002780;5.65e-52;41!UBERON:0001890;5.65e-52;41!UBERON:0000073;5.23e-41;53!UBERON:0002616;5.23e-41;53!UBERON:0000955;3.75e-34;68!UBERON:0001017;6.76e-30;75!UBERON:0001016;5.70e-25;83!UBERON:0000200;1.50e-19;6!UBERON:0002420;1.76e-17;9!UBERON:0007245;1.76e-17;9!UBERON:0010009;1.76e-17;9!UBERON:0010011;1.76e-17;9!UBERON:0000454;1.76e-17;9!UBERON:0002021;3.71e-17;5!UBERON:0001872;5.46e-17;5!UBERON:0001871;1.57e-16;6!UBERON:0003296;9.94e-15;4!UBERON:0010133;9.94e-15;4!UBERON:0000369;5.86e-14;4!UBERON:0002435;5.86e-14;4!UBERON:0000204;5.86e-14;4!UBERON:0000125;6.17e-13;9!UBERON:0002308;6.17e-13;9!UBERON:0001894;2.23e-12;7!UBERON:0009663;4.80e-12;7!UBERON:0007023;1.92e-11;114!UBERON:0000349;3.55e-11;5!UBERON:0001870;9.89e-11;3!UBERON:0005383;9.89e-11;3!UBERON:0005382;9.89e-11;3!UBERON:0011216;1.39e-09;132!UBERON:0002680;8.53e-09;9!UBERON:0001895;8.53e-09;9!UBERON:0001905;1.44e-08;2!UBERON:0002757;1.44e-08;2!UBERON:0010134;1.44e-08;2!UBERON:0005408;1.44e-08;2!UBERON:0001899;1.44e-08;2!UBERON:0000007;7.34e-08;2!UBERON:0002771;1.73e-07;2!UBERON:0001876;1.73e-07;2!UBERON:0001873;1.73e-07;2!UBERON:0002702;1.73e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.17e-77,53;UBERON:0002616,9.17e-77,53;UBERON:0002780,4.58e-75,41;UBERON:0001890,4.58e-75,41;UBERON:0003080,4.58e-75,41;UBERON:0006240,4.58e-75,41;UBERON:0001049,3.21e-72,56;UBERON:0005068,3.21e-72,56;UBERON:0006241,3.21e-72,56;UBERON:0007135,3.21e-72,56;UBERON:0001017,1.29e-68,81;UBERON:0001869,5.82e-68,32;UBERON:0000955,1.26e-67,68;UBERON:0006238,1.26e-67,68;UBERON:0001016,2.62e-67,89;UBERON:0001893,1.17e-63,34;UBERON:0003528,3.19e-63,34;UBERON:0002020,3.19e-63,34;UBERON:0002791,1.41e-62,32;UBERON:0002619,1.56e-59,22;UBERON:0001950,3.11e-59,20;UBERON:0000956,5.19e-52,25;UBERON:0000203,5.19e-52,25;UBERON:0003056,4.24e-48,61;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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=8bp_to_uc010dnh.2_5end | |||
|coexpression_cluster_id=C759 | |||
|description=CAGE_peak_9_at_SYT4_5end | |||
|id=chr18:40857484..40857491,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.73e-07;2!CL:0000242;1.73e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.50e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.06e-16;82!UBERON:0006215;2.90e-10;3!UBERON:0010122;1.73e-07;2 | |||
|ontology_enrichment_disease=DOID:171!9.26e-08!10;DOID:169!9.59e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@SYT4 | |||
}} |
Revision as of 17:31, 11 September 2013
Short description: | p9@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | 8bp_to_uc010dnh.2_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.50e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.