FFCP PHASE1:Hg19::chr18:13218805..13218813,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=753|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1224|TSSclassifier=S|UniProt=O15165|association_with_transcript=19bp_to_ENST00000361205,ENST00000399848,NM_181481,NM_181482,uc002ksa.2,uc002ksb.2_5end|description=CAGE_peak_7_at_C18orf1_5end|id=chr18:13218805..13218813,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000895;2.38e-10;1|ontology_enrichment_celltype_v019_2=CL:0000810,3.61e-10,1;CL:0000895,3.61e-10,1;CL:0002436,3.61e-10,1;CL:0002427,3.61e-10,1;CL:0002428,3.61e-10,1;CL:0002429,3.61e-10,1;CL:0002433,3.61e-10,1;CL:0002431,3.61e-10,1;CL:0002432,3.61e-10,1|ontology_enrichment_development_v019=UBERON:0006241;5.80e-13;3!UBERON:0003057;5.80e-13;3!UBERON:0000358;8.93e-11;1!UBERON:0004140;8.93e-11;1!CL:0002427;2.38e-10;1!UBERON:0006222;2.38e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.25e-39!115;UBERON:0001049!4.63e-35!57;UBERON:0005068!4.63e-35!57;UBERON:0006241!4.63e-35!57;UBERON:0007135!4.63e-35!57;UBERON:0005743!3.26e-31!86;UBERON:0001017!1.91e-30!82;UBERON:0003075!2.35e-28!86;UBERON:0007284!2.35e-28!86;UBERON:0002616!1.86e-27!59;UBERON:0002020!3.68e-27!34;UBERON:0003528!3.68e-27!34;UBERON:0000073!7.19e-27!94;UBERON:0001016!7.19e-27!94;UBERON:0002780!7.96e-27!41;UBERON:0001890!7.96e-27!41;UBERON:0006240!7.96e-27!41;UBERON:0001893!1.07e-26!34;UBERON:0002346!1.87e-26!90;UBERON:0003080!5.66e-26!42;UBERON:0000955!9.41e-26!69;UBERON:0006238!9.41e-26!69;UBERON:0002791!1.61e-25!33;UBERON:0001869!1.89e-24!32;UBERON:0003056!9.26e-19!61;UBERON:0002619!1.18e-16!22;UBERON:0000153!1.28e-16!129;UBERON:0007811!1.28e-16!129;UBERON:0000956!8.63e-16!25;UBERON:0000203!8.63e-16!25;UBERON:0002308!4.79e-14!9;UBERON:0000125!4.79e-14!9;UBERON:0001950!5.20e-14!20;UBERON:0004121!1.14e-13!169;UBERON:0000033!3.87e-13!123;UBERON:0000924!5.14e-13!173;UBERON:0006601!5.14e-13!173;UBERON:0009663!3.24e-11!7;UBERON:0002420!3.72e-11!9;UBERON:0007245!3.72e-11!9;UBERON:0010009!3.72e-11!9;UBERON:0010011!3.72e-11!9;UBERON:0000454!3.72e-11!9;UBERON:0003076!4.35e-10!15;UBERON:0003057!4.35e-10!15;UBERON:0002298!4.53e-10!8;UBERON:0000369!2.37e-07!4;UBERON:0002435!2.37e-07!4;UBERON:0000204!2.37e-07!4;UBERON:0010082!2.37e-07!4;UBERON:0000025!9.59e-07!194|ontology_enrichment_uberon_v019=UBERON:0002370;6.42e-20;2!UBERON:0005058;6.42e-20;2!UBERON:0009113;6.42e-20;2!UBERON:0002240;5.80e-13;3!UBERON:0005174;5.80e-13;3!UBERON:0001137;5.80e-13;3!UBERON:0004177;1.63e-08;5!UBERON:0005057;1.63e-08;5!UBERON:0002298;6.48e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.32e-21,4;UBERON:0005058,2.32e-21,4;UBERON:0009113,2.32e-21,4;UBERON:0003295,2.32e-21,4;UBERON:0005562,2.32e-21,4;UBERON:0003351,1.91e-14,6;UBERON:0002240,6.17e-13,3;UBERON:0005174,6.17e-13,3;UBERON:0001137,6.17e-13,3;UBERON:0004177,1.83e-12,7;UBERON:0005057,1.83e-12,7;UBERON:0001017,1.65e-11,81;UBERON:0001016,3.26e-10,89;UBERON:0003076,7.23e-10,15;UBERON:0003057,7.23e-10,15;UBERON:0001049,3.42e-09,56;UBERON:0005068,3.42e-09,56;UBERON:0006241,3.42e-09,56;UBERON:0007135,3.42e-09,56;UBERON:0000974,7.04e-09,10;UBERON:0003408,7.04e-09,10;UBERON:0001042,7.04e-09,10;UBERON:0009145,7.04e-09,10;UBERON:0006562,4.09e-08,11;UBERON:0009722,4.09e-08,11;UBERON:0007690,4.09e-08,11;UBERON:0002298,5.42e-07,6|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0.647787332037959,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0.512321413058201,0,0,0.645484683583826,0,0,1.09162460023138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0.267540828089713,0,0,1.14966148080576,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0.476981248610684,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,1.30139853857622,0,1.34013012267479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0.213425530045242,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.42584623769032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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=753 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1224 | |||
|TSSclassifier=S | |||
|UniProt=O15165 | |||
|association_with_transcript=19bp_to_ENST00000361205,ENST00000399848,NM_181481,NM_181482,uc002ksa.2,uc002ksb.2_5end | |||
|description=CAGE_peak_7_at_C18orf1_5end | |||
|id=chr18:13218805..13218813,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000895;2.38e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,3.61e-10,1;CL:0000895,3.61e-10,1;CL:0002436,3.61e-10,1;CL:0002427,3.61e-10,1;CL:0002428,3.61e-10,1;CL:0002429,3.61e-10,1;CL:0002433,3.61e-10,1;CL:0002431,3.61e-10,1;CL:0002432,3.61e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.80e-13;3!UBERON:0003057;5.80e-13;3!UBERON:0000358;8.93e-11;1!UBERON:0004140;8.93e-11;1!CL:0002427;2.38e-10;1!UBERON:0006222;2.38e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.25e-39!115;UBERON:0001049!4.63e-35!57;UBERON:0005068!4.63e-35!57;UBERON:0006241!4.63e-35!57;UBERON:0007135!4.63e-35!57;UBERON:0005743!3.26e-31!86;UBERON:0001017!1.91e-30!82;UBERON:0003075!2.35e-28!86;UBERON:0007284!2.35e-28!86;UBERON:0002616!1.86e-27!59;UBERON:0002020!3.68e-27!34;UBERON:0003528!3.68e-27!34;UBERON:0000073!7.19e-27!94;UBERON:0001016!7.19e-27!94;UBERON:0002780!7.96e-27!41;UBERON:0001890!7.96e-27!41;UBERON:0006240!7.96e-27!41;UBERON:0001893!1.07e-26!34;UBERON:0002346!1.87e-26!90;UBERON:0003080!5.66e-26!42;UBERON:0000955!9.41e-26!69;UBERON:0006238!9.41e-26!69;UBERON:0002791!1.61e-25!33;UBERON:0001869!1.89e-24!32;UBERON:0003056!9.26e-19!61;UBERON:0002619!1.18e-16!22;UBERON:0000153!1.28e-16!129;UBERON:0007811!1.28e-16!129;UBERON:0000956!8.63e-16!25;UBERON:0000203!8.63e-16!25;UBERON:0002308!4.79e-14!9;UBERON:0000125!4.79e-14!9;UBERON:0001950!5.20e-14!20;UBERON:0004121!1.14e-13!169;UBERON:0000033!3.87e-13!123;UBERON:0000924!5.14e-13!173;UBERON:0006601!5.14e-13!173;UBERON:0009663!3.24e-11!7;UBERON:0002420!3.72e-11!9;UBERON:0007245!3.72e-11!9;UBERON:0010009!3.72e-11!9;UBERON:0010011!3.72e-11!9;UBERON:0000454!3.72e-11!9;UBERON:0003076!4.35e-10!15;UBERON:0003057!4.35e-10!15;UBERON:0002298!4.53e-10!8;UBERON:0000369!2.37e-07!4;UBERON:0002435!2.37e-07!4;UBERON:0000204!2.37e-07!4;UBERON:0010082!2.37e-07!4;UBERON:0000025!9.59e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.42e-20;2!UBERON:0005058;6.42e-20;2!UBERON:0009113;6.42e-20;2!UBERON:0002240;5.80e-13;3!UBERON:0005174;5.80e-13;3!UBERON:0001137;5.80e-13;3!UBERON:0004177;1.63e-08;5!UBERON:0005057;1.63e-08;5!UBERON:0002298;6.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.32e-21,4;UBERON:0005058,2.32e-21,4;UBERON:0009113,2.32e-21,4;UBERON:0003295,2.32e-21,4;UBERON:0005562,2.32e-21,4;UBERON:0003351,1.91e-14,6;UBERON:0002240,6.17e-13,3;UBERON:0005174,6.17e-13,3;UBERON:0001137,6.17e-13,3;UBERON:0004177,1.83e-12,7;UBERON:0005057,1.83e-12,7;UBERON:0001017,1.65e-11,81;UBERON:0001016,3.26e-10,89;UBERON:0003076,7.23e-10,15;UBERON:0003057,7.23e-10,15;UBERON:0001049,3.42e-09,56;UBERON:0005068,3.42e-09,56;UBERON:0006241,3.42e-09,56;UBERON:0007135,3.42e-09,56;UBERON:0000974,7.04e-09,10;UBERON:0003408,7.04e-09,10;UBERON:0001042,7.04e-09,10;UBERON:0009145,7.04e-09,10;UBERON:0006562,4.09e-08,11;UBERON:0009722,4.09e-08,11;UBERON:0007690,4.09e-08,11;UBERON:0002298,5.42e-07,6 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0.647787332037959,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0.512321413058201,0,0,0.645484683583826,0,0,1.09162460023138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0.267540828089713,0,0,1.14966148080576,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0.476981248610684,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,1.30139853857622,0,1.34013012267479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0.213425530045242,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0.886642856860642,0.438770794307945,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.83309043480088,0,0.123563938946503,0.104421949505455,0.202203398942031,0,1.63985112007737,0,0,0,0,0,0.61214552326098,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.50648636764703,0,0,0.85381197895741,0,0,0,0.171594997861965,0,0,0,0,0,0,0,2.40168115483916,0.136905378891993,0,0,0,0.558564802544508,0.687481272035051,0,0.399358000997982,1.28767814440971,0.446342914883745,2.08268764708851,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.425246896606173,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0,0.573409195690071,0.665574309221114,1.42821726765182,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0.6124909547064,0.834979926253974,0,0,0.41023272848151,1.00828678488687,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.405225507710368,0,0.620060389503552,0.253663240775627,1.64092442705466,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0,0,0.171488009437418,0.611727596791485,0.263091094251396,0,0,0.39246546425257,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0.470317296361523,0,0,1.37415926980462,1.18818560130834,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.407948941145488,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.310298987585686,0.426467963801962,0.23806443146374,2.26061184426021,3.1037357147929,0,0,0,0,0,0.134704106029175,0,0.665320713092027,0,0,0,0,2.34640942403454,0.488965776731466,0.406896178315738,0,1.00636896795513,0 | |||
|short_description=p7@C18orf1 | |||
}} |
Revision as of 16:54, 11 September 2013
Short description: | p7@C18orf1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_C18orf1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000361205, ENST00000399848, NM_181481, NM_181482, uc002ksa.2, uc002ksb.2_5end |
EntrezGene: | C18orf1 |
HGNC: | 1224 |
UniProt: | O15165 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 3.61e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.61e-10 | 1 |
mature CD4 single-positive thymocyte | 3.61e-10 | 1 |
resting double-positive thymocyte | 3.61e-10 | 1 |
double-positive blast | 3.61e-10 | 1 |
CD69-positive double-positive thymocyte | 3.61e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.61e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.61e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.61e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.32e-21 | 4 |
hemolymphoid system gland | 2.32e-21 | 4 |
thymic region | 2.32e-21 | 4 |
pharyngeal gland | 2.32e-21 | 4 |
thymus primordium | 2.32e-21 | 4 |
pharyngeal epithelium | 1.91e-14 | 6 |
spinal cord | 6.17e-13 | 3 |
dorsal region element | 6.17e-13 | 3 |
dorsum | 6.17e-13 | 3 |
hemopoietic organ | 1.83e-12 | 7 |
immune organ | 1.83e-12 | 7 |
central nervous system | 1.65e-11 | 81 |
nervous system | 3.26e-10 | 89 |
posterior neural tube | 7.23e-10 | 15 |
chordal neural plate | 7.23e-10 | 15 |
neural tube | 3.42e-09 | 56 |
neural rod | 3.42e-09 | 56 |
future spinal cord | 3.42e-09 | 56 |
neural keel | 3.42e-09 | 56 |
neck | 7.04e-09 | 10 |
gland of gut | 7.04e-09 | 10 |
chordate pharynx | 7.04e-09 | 10 |
pharyngeal region of foregut | 7.04e-09 | 10 |
pharynx | 4.09e-08 | 11 |
entire pharyngeal arch endoderm | 4.09e-08 | 11 |
early pharyngeal endoderm | 4.09e-08 | 11 |
brainstem | 5.42e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.