FFCP PHASE1:Hg19::chr17:46703436..46703460,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3219|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5120|TSSclassifier=S|UniProt=|association_with_transcript=153bp_to_AK056123_5end|coexpression_cluster_id=C21|description=CAGE_peak_7_at_HOXB9_5end|id=chr17:46703436..46703460,-|ontology_enrichment_celltype=CL:0000066!3.34e-18!254;CL:1000497!5.48e-12!18;CL:0002518!5.48e-12!18;CL:1000507!9.58e-12!12;CL:1000494!9.58e-12!12;CL:0000076!3.50e-10!62;CL:1000449!6.94e-10!16;CL:0000077!2.40e-07!19;CL:0002681!6.71e-07!13;CL:0002584!6.71e-07!13|ontology_enrichment_celltype_v019=CL:1000497;3.32e-11;17!CL:0002518;3.32e-11;17!CL:0000082;9.04e-10;19!CL:1000507;4.73e-09;10!CL:1000494;4.73e-09;10!CL:1000449;5.42e-09;15!CL:0002681;1.49e-07;12!CL:0002584;1.49e-07;12!CL:0002553;3.71e-07;1|ontology_enrichment_celltype_v019_2=CL:1000497,2.20e-11,17;CL:0002518,2.20e-11,17;CL:0000082,1.14e-09,19;CL:1000507,3.69e-09,10;CL:1000494,3.69e-09,10;CL:1000449,3.71e-09,15;CL:0002681,1.11e-07,12;CL:0002584,1.11e-07,12;CL:0002553,3.73e-07,1;CL:0000946,9.25e-07,1;CL:0000786,9.25e-07,1;CL:0000980,9.25e-07,1|ontology_enrichment_development_v019=UBERON:0003918;4.30e-09;10!UBERON:0007687;4.30e-09;10|ontology_enrichment_disease=DOID:0050687!3.21e-25!143;DOID:14566!1.47e-24!239;DOID:162!5.39e-24!235;DOID:305!4.73e-19!106;DOID:1749!7.71e-10!14|ontology_enrichment_disease_v019=DOID:1324;1.58e-12;15!DOID:0050615;1.04e-11;16!DOID:3908;3.08e-10;5!DOID:3905;9.87e-10;9!DOID:4556;4.22e-08;3|ontology_enrichment_disease_v019_2=DOID:1324,2.13e-12,15;DOID:0050615,1.37e-11,16;DOID:3908,3.40e-10,5;DOID:3905,1.40e-09,9;DOID:4556,5.44e-08,3;DOID:6193,9.79e-07,1|ontology_enrichment_uberon=UBERON:0000489!1.55e-20!32;UBERON:0002113!2.48e-17!27;UBERON:0003918!2.48e-17!27;UBERON:0005095!2.48e-17!27;UBERON:0007687!2.48e-17!27;UBERON:0006554!1.09e-14!44;UBERON:0001008!3.63e-14!45;UBERON:0000058!1.68e-13!26;UBERON:0000080!5.48e-12!18;UBERON:0002120!5.48e-12!18;UBERON:0004875!5.48e-12!18;UBERON:0005721!5.48e-12!18;UBERON:0005754!5.48e-12!18;UBERON:0007297!5.48e-12!18;UBERON:0009773!9.58e-12!12;UBERON:0001231!9.58e-12!12;UBERON:0004810!9.58e-12!12;UBERON:0006555!5.70e-11!17;UBERON:0005103!5.70e-11!17;UBERON:0000083!5.70e-11!17;UBERON:0009201!5.70e-11!17;UBERON:0004819!5.70e-11!17;UBERON:0006553!5.70e-11!17;UBERON:0003074!5.70e-11!17;UBERON:0003060!5.70e-11!17;UBERON:0004876!2.37e-10!20;UBERON:0004211!6.94e-10!16;UBERON:0001285!6.94e-10!16;UBERON:0007684!6.94e-10!16;UBERON:0003220!6.94e-10!16;UBERON:0004208!6.94e-10!16;UBERON:0003887!1.17e-09!21;UBERON:0002417!5.53e-09!61;UBERON:0000916!5.53e-09!61;UBERON:0005177!6.31e-09!107;UBERON:0005172!3.00e-08!55;UBERON:0005173!3.00e-08!55;UBERON:0003064!8.98e-08!37;UBERON:0003886!3.51e-07!63;UBERON:0001225!6.71e-07!13;UBERON:0008987!6.71e-07!13|ontology_enrichment_uberon_v019=UBERON:0000489;8.95e-21;29!UBERON:0006554;5.19e-20;30!UBERON:0001008;5.19e-20;30!UBERON:0002113;3.94e-17;24!UBERON:0011143;3.94e-17;24!UBERON:0004802;9.04e-10;19!UBERON:0000115;9.04e-10;19!UBERON:0004211;4.73e-09;10!UBERON:0009773;4.73e-09;10!UBERON:0001231;4.73e-09;10!UBERON:0004810;4.73e-09;10!UBERON:0006555;5.42e-09;15!UBERON:0004819;5.42e-09;15!UBERON:0001285;5.42e-09;15!UBERON:0007684;5.42e-09;15!UBERON:0002048;2.33e-08;22!UBERON:0004807;2.33e-08;22!UBERON:0000117;2.33e-08;22!UBERON:0000171;2.33e-08;22!UBERON:0000170;2.33e-08;22!UBERON:0005911;8.78e-08;36!UBERON:0001225;1.49e-07;12!UBERON:0008987;1.49e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0000489,5.50e-23,31;UBERON:0002113,1.91e-19,26;UBERON:0003918,1.91e-19,26;UBERON:0011143,1.91e-19,26;UBERON:0005095,1.91e-19,26;UBERON:0007687,1.91e-19,26;UBERON:0006554,1.98e-14,47;UBERON:0001008,4.44e-14,48;UBERON:0005177,1.86e-13,101;UBERON:0006555,5.94e-12,16;UBERON:0004819,5.94e-12,16;UBERON:0004802,1.14e-09,19;UBERON:0000115,1.14e-09,19;UBERON:0003103,3.44e-09,68;UBERON:0004810,3.69e-09,10;UBERON:0004211,3.71e-09,15;UBERON:0009773,3.71e-09,15;UBERON:0001231,3.71e-09,15;UBERON:0001285,3.71e-09,15;UBERON:0007684,3.71e-09,15;UBERON:0004208,3.71e-09,15;UBERON:0009569,4.85e-09,112;UBERON:0004807,1.60e-08,28;UBERON:0005172,2.02e-08,54;UBERON:0005173,2.02e-08,54;UBERON:0002048,2.83e-08,22;UBERON:0000117,2.83e-08,22;UBERON:0000171,2.83e-08,22;UBERON:0000170,2.83e-08,22;UBERON:0005597,2.83e-08,22;UBERON:0000118,2.83e-08,22;UBERON:0001225,1.11e-07,12;UBERON:0008987,1.11e-07,12;UBERON:0002417,2.10e-07,60;UBERON:0000916,2.10e-07,60|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.66944122552934,0.402829317109147,0.760272105718513,0.732186172644509,0.367663080345869,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3219 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5120 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=153bp_to_AK056123_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_7_at_HOXB9_5end | |||
|id=chr17:46703436..46703460,- | |||
|ontology_enrichment_celltype=CL:0000066!3.34e-18!254;CL:1000497!5.48e-12!18;CL:0002518!5.48e-12!18;CL:1000507!9.58e-12!12;CL:1000494!9.58e-12!12;CL:0000076!3.50e-10!62;CL:1000449!6.94e-10!16;CL:0000077!2.40e-07!19;CL:0002681!6.71e-07!13;CL:0002584!6.71e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.32e-11;17!CL:0002518;3.32e-11;17!CL:0000082;9.04e-10;19!CL:1000507;4.73e-09;10!CL:1000494;4.73e-09;10!CL:1000449;5.42e-09;15!CL:0002681;1.49e-07;12!CL:0002584;1.49e-07;12!CL:0002553;3.71e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.20e-11,17;CL:0002518,2.20e-11,17;CL:0000082,1.14e-09,19;CL:1000507,3.69e-09,10;CL:1000494,3.69e-09,10;CL:1000449,3.71e-09,15;CL:0002681,1.11e-07,12;CL:0002584,1.11e-07,12;CL:0002553,3.73e-07,1;CL:0000946,9.25e-07,1;CL:0000786,9.25e-07,1;CL:0000980,9.25e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.30e-09;10!UBERON:0007687;4.30e-09;10 | |||
|ontology_enrichment_disease=DOID:0050687!3.21e-25!143;DOID:14566!1.47e-24!239;DOID:162!5.39e-24!235;DOID:305!4.73e-19!106;DOID:1749!7.71e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.58e-12;15!DOID:0050615;1.04e-11;16!DOID:3908;3.08e-10;5!DOID:3905;9.87e-10;9!DOID:4556;4.22e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,2.13e-12,15;DOID:0050615,1.37e-11,16;DOID:3908,3.40e-10,5;DOID:3905,1.40e-09,9;DOID:4556,5.44e-08,3;DOID:6193,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000489!1.55e-20!32;UBERON:0002113!2.48e-17!27;UBERON:0003918!2.48e-17!27;UBERON:0005095!2.48e-17!27;UBERON:0007687!2.48e-17!27;UBERON:0006554!1.09e-14!44;UBERON:0001008!3.63e-14!45;UBERON:0000058!1.68e-13!26;UBERON:0000080!5.48e-12!18;UBERON:0002120!5.48e-12!18;UBERON:0004875!5.48e-12!18;UBERON:0005721!5.48e-12!18;UBERON:0005754!5.48e-12!18;UBERON:0007297!5.48e-12!18;UBERON:0009773!9.58e-12!12;UBERON:0001231!9.58e-12!12;UBERON:0004810!9.58e-12!12;UBERON:0006555!5.70e-11!17;UBERON:0005103!5.70e-11!17;UBERON:0000083!5.70e-11!17;UBERON:0009201!5.70e-11!17;UBERON:0004819!5.70e-11!17;UBERON:0006553!5.70e-11!17;UBERON:0003074!5.70e-11!17;UBERON:0003060!5.70e-11!17;UBERON:0004876!2.37e-10!20;UBERON:0004211!6.94e-10!16;UBERON:0001285!6.94e-10!16;UBERON:0007684!6.94e-10!16;UBERON:0003220!6.94e-10!16;UBERON:0004208!6.94e-10!16;UBERON:0003887!1.17e-09!21;UBERON:0002417!5.53e-09!61;UBERON:0000916!5.53e-09!61;UBERON:0005177!6.31e-09!107;UBERON:0005172!3.00e-08!55;UBERON:0005173!3.00e-08!55;UBERON:0003064!8.98e-08!37;UBERON:0003886!3.51e-07!63;UBERON:0001225!6.71e-07!13;UBERON:0008987!6.71e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;8.95e-21;29!UBERON:0006554;5.19e-20;30!UBERON:0001008;5.19e-20;30!UBERON:0002113;3.94e-17;24!UBERON:0011143;3.94e-17;24!UBERON:0004802;9.04e-10;19!UBERON:0000115;9.04e-10;19!UBERON:0004211;4.73e-09;10!UBERON:0009773;4.73e-09;10!UBERON:0001231;4.73e-09;10!UBERON:0004810;4.73e-09;10!UBERON:0006555;5.42e-09;15!UBERON:0004819;5.42e-09;15!UBERON:0001285;5.42e-09;15!UBERON:0007684;5.42e-09;15!UBERON:0002048;2.33e-08;22!UBERON:0004807;2.33e-08;22!UBERON:0000117;2.33e-08;22!UBERON:0000171;2.33e-08;22!UBERON:0000170;2.33e-08;22!UBERON:0005911;8.78e-08;36!UBERON:0001225;1.49e-07;12!UBERON:0008987;1.49e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,5.50e-23,31;UBERON:0002113,1.91e-19,26;UBERON:0003918,1.91e-19,26;UBERON:0011143,1.91e-19,26;UBERON:0005095,1.91e-19,26;UBERON:0007687,1.91e-19,26;UBERON:0006554,1.98e-14,47;UBERON:0001008,4.44e-14,48;UBERON:0005177,1.86e-13,101;UBERON:0006555,5.94e-12,16;UBERON:0004819,5.94e-12,16;UBERON:0004802,1.14e-09,19;UBERON:0000115,1.14e-09,19;UBERON:0003103,3.44e-09,68;UBERON:0004810,3.69e-09,10;UBERON:0004211,3.71e-09,15;UBERON:0009773,3.71e-09,15;UBERON:0001231,3.71e-09,15;UBERON:0001285,3.71e-09,15;UBERON:0007684,3.71e-09,15;UBERON:0004208,3.71e-09,15;UBERON:0009569,4.85e-09,112;UBERON:0004807,1.60e-08,28;UBERON:0005172,2.02e-08,54;UBERON:0005173,2.02e-08,54;UBERON:0002048,2.83e-08,22;UBERON:0000117,2.83e-08,22;UBERON:0000171,2.83e-08,22;UBERON:0000170,2.83e-08,22;UBERON:0005597,2.83e-08,22;UBERON:0000118,2.83e-08,22;UBERON:0001225,1.11e-07,12;UBERON:0008987,1.11e-07,12;UBERON:0002417,2.10e-07,60;UBERON:0000916,2.10e-07,60 | |||
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|short_description=p7@HOXB9 | |||
}} |
Revision as of 14:17, 11 September 2013
Short description: | p7@HOXB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_HOXB9_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 153bp_to_AK056123_5end |
EntrezGene: | HOXB9 |
HGNC: | 5120 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.20e-11 | 17 |
kidney epithelial cell | 2.20e-11 | 17 |
epithelial cell of lung | 1.14e-09 | 19 |
kidney tubule cell | 3.69e-09 | 10 |
nephron tubule epithelial cell | 3.69e-09 | 10 |
epithelial cell of nephron | 3.71e-09 | 15 |
kidney cortical cell | 1.11e-07 | 12 |
renal cortical epithelial cell | 1.11e-07 | 12 |
lung fibroblast | 3.73e-07 | 1 |
antibody secreting cell | 9.25e-07 | 1 |
plasma cell | 9.25e-07 | 1 |
plasmablast | 9.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 5.50e-23 | 31 |
kidney | 1.91e-19 | 26 |
kidney mesenchyme | 1.91e-19 | 26 |
upper urinary tract | 1.91e-19 | 26 |
kidney rudiment | 1.91e-19 | 26 |
kidney field | 1.91e-19 | 26 |
urinary system structure | 1.98e-14 | 47 |
renal system | 4.44e-14 | 48 |
trunk region element | 1.86e-13 | 101 |
excretory tube | 5.94e-12 | 16 |
kidney epithelium | 5.94e-12 | 16 |
respiratory tract epithelium | 1.14e-09 | 19 |
lung epithelium | 1.14e-09 | 19 |
compound organ | 3.44e-09 | 68 |
nephron tubule epithelium | 3.69e-09 | 10 |
nephron epithelium | 3.71e-09 | 15 |
renal tubule | 3.71e-09 | 15 |
nephron tubule | 3.71e-09 | 15 |
nephron | 3.71e-09 | 15 |
uriniferous tubule | 3.71e-09 | 15 |
nephrogenic mesenchyme | 3.71e-09 | 15 |
subdivision of trunk | 4.85e-09 | 112 |
respiratory system epithelium | 1.60e-08 | 28 |
abdomen element | 2.02e-08 | 54 |
abdominal segment element | 2.02e-08 | 54 |
lung | 2.83e-08 | 22 |
respiratory tube | 2.83e-08 | 22 |
respiration organ | 2.83e-08 | 22 |
pair of lungs | 2.83e-08 | 22 |
lung primordium | 2.83e-08 | 22 |
lung bud | 2.83e-08 | 22 |
cortex of kidney | 1.11e-07 | 12 |
renal parenchyma | 1.11e-07 | 12 |
abdominal segment of trunk | 2.10e-07 | 60 |
abdomen | 2.10e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 2.13e-12 | 15 |
respiratory system cancer | 1.37e-11 | 16 |
non-small cell lung carcinoma | 3.40e-10 | 5 |
lung carcinoma | 1.40e-09 | 9 |
lung large cell carcinoma | 5.44e-08 | 3 |
epithelioid sarcoma | 9.79e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.