FFCP PHASE1:Hg19::chr17:45266228..45266253,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=996|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1728|TSSclassifier=S|UniProt=|association_with_transcript=48bp_to_ENST00000528748_5end|description=CAGE_peak_4_at_CDC27_5end|id=chr17:45266228..45266253,-|ontology_enrichment_celltype=CL:0002139!9.47e-20!24;CL:0000071!8.99e-16!18;CL:0002546!8.99e-16!18;CL:0000115!1.63e-13!35;CL:0002078!4.93e-11!44;CL:0000213!4.35e-09!57;CL:0000215!4.35e-09!57;CL:1000413!1.51e-07!9;CL:0002543!6.61e-07!6|ontology_enrichment_celltype_v019=CL:0002139;2.50e-52;24!CL:0000115;9.10e-35;36!CL:0000071;8.99e-31;18!CL:0002078;2.31e-25;45!CL:0002138;3.37e-25;6!CL:0002144;2.16e-18;3!CL:0000213;3.70e-17;58!CL:0000215;3.70e-17;58!CL:1000413;1.10e-10;9!CL:0002543;2.75e-09;6!CL:0000136;7.09e-08;13|ontology_enrichment_celltype_v019_2=CL:0002139,3.49e-52,24;CL:0000115,2.01e-43,36;CL:0002078,4.97e-34,45;CL:0000071,1.84e-30,18;CL:0002546,1.84e-30,18;CL:0000213,1.32e-25,58;CL:0000215,1.32e-25,58;CL:0005020,1.73e-25,6;CL:0002138,1.73e-25,6;CL:0005022,1.73e-25,6;CL:0002144,3.19e-18,3;CL:1000413,1.86e-10,9;CL:0000222,1.96e-10,121;CL:0002543,2.38e-09,6;CL:0000076,1.78e-07,63;CL:0000136,7.72e-07,15|ontology_enrichment_development_v019=CL:0002546;8.99e-31;18!CL:0005022;3.37e-25;6!UBERON:0010226;3.84e-07;1!UBERON:0010115;3.84e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!8.99e-16!18;UBERON:0004638!8.99e-16!18;UBERON:0004852!8.99e-16!18;UBERON:0006914!1.94e-12!25;UBERON:0000487!1.12e-11!22;UBERON:0007023!2.19e-11!115;UBERON:0000055!3.39e-10!69;UBERON:0001009!4.70e-09!113;UBERON:0004535!5.25e-09!110;UBERON:0004872!1.86e-08!84;UBERON:0002049!7.61e-08!79;UBERON:0007798!7.61e-08!79;UBERON:0001981!1.33e-07!60;UBERON:0007500!1.33e-07!60;UBERON:0004537!1.33e-07!60;UBERON:0006965!1.33e-07!60;UBERON:0003915!1.51e-07!9;UBERON:0004700!1.51e-07!9;UBERON:0001917!1.51e-07!9;UBERON:0000477!1.63e-07!286;UBERON:0003914!1.92e-07!118;UBERON:0004111!9.86e-07!241|ontology_enrichment_uberon_v019=UBERON:0004638;8.99e-31;18!UBERON:0001986;8.99e-31;18!UBERON:0004852;8.99e-31;18!UBERON:0000487;7.29e-25;22!UBERON:0006914;1.14e-21;25!UBERON:0001473;7.33e-19;8!UBERON:0004536;7.33e-19;8!UBERON:0006558;7.33e-19;8!UBERON:0010523;2.16e-18;3!UBERON:0001915;2.16e-18;3!UBERON:0001982;2.16e-18;3!UBERON:0002465;4.73e-15;10!UBERON:0000490;1.90e-14;33!UBERON:0003915;1.10e-10;9!UBERON:0004700;1.10e-10;9!UBERON:0001917;1.10e-10;9!UBERON:0000055;1.15e-10;65!UBERON:0004151;1.05e-08;3!UBERON:0002049;1.19e-08;75!UBERON:0007798;1.19e-08;75!UBERON:0002363;3.84e-07;1!UBERON:0002084;3.84e-07;1!UBERON:0002134;3.84e-07;1!UBERON:0001389;3.84e-07;1!UBERON:0000026;3.84e-07;1!UBERON:0008784;3.84e-07;1!UBERON:0006058;3.84e-07;1!UBERON:0003663;3.84e-07;1!UBERON:0004256;3.84e-07;1!UBERON:0002082;3.84e-07;1!UBERON:0004708;3.84e-07;1!UBERON:0002101;3.84e-07;1!UBERON:0004709;3.84e-07;1!UBERON:0005208;3.84e-07;1!UBERON:0002529;3.84e-07;1!UBERON:0010538;3.84e-07;1!UBERON:0003661;3.84e-07;1!UBERON:0010890;3.84e-07;1!UBERON:0002471;3.84e-07;1!UBERON:0001383;3.84e-07;1!UBERON:0004145;3.84e-07;1!UBERON:0005946;3.84e-07;1!UBERON:0010758;3.84e-07;1!UBERON:0010707;3.84e-07;1!UBERON:0000978;3.84e-07;1!UBERON:0002103;3.84e-07;1!UBERON:0001665;3.84e-07;1!UBERON:0003823;3.84e-07;1!UBERON:0000154;3.84e-07;1!UBERON:0010709;3.84e-07;1!UBERON:0005965;3.84e-07;1!UBERON:0002078;3.84e-07;1!UBERON:0002193;4.59e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.84e-30,18;UBERON:0001986,1.84e-30,18;UBERON:0004852,1.84e-30,18;UBERON:0000487,1.30e-24,22;UBERON:0006914,1.89e-21,25;UBERON:0001473,4.47e-19,8;UBERON:0004536,4.47e-19,8;UBERON:0006558,4.47e-19,8;UBERON:0000055,7.74e-19,68;UBERON:0001009,9.99e-19,112;UBERON:0010523,3.19e-18,3;UBERON:0001915,3.19e-18,3;UBERON:0001982,3.19e-18,3;UBERON:0004535,2.13e-17,109;UBERON:0002049,5.38e-16,78;UBERON:0007798,5.38e-16,78;UBERON:0002465,3.20e-15,10;UBERON:0003915,1.86e-10,9;UBERON:0004700,1.86e-10,9;UBERON:0001917,1.86e-10,9;UBERON:0007500,7.21e-10,59;UBERON:0001981,7.21e-10,59;UBERON:0004537,7.21e-10,59;UBERON:0006965,7.21e-10,59;UBERON:0003914,2.72e-09,117;UBERON:0004151,1.06e-08,3;UBERON:0004872,9.07e-08,83;UBERON:0005418,1.97e-07,1;UBERON:0001389,1.97e-07,1;UBERON:0000026,1.97e-07,1;UBERON:0008784,1.97e-07,1;UBERON:0006058,1.97e-07,1;UBERON:0003663,1.97e-07,1;UBERON:0004256,1.97e-07,1;UBERON:0004708,1.97e-07,1;UBERON:0002101,1.97e-07,1;UBERON:0004709,1.97e-07,1;UBERON:0002529,1.97e-07,1;UBERON:0010538,1.97e-07,1;UBERON:0003661,1.97e-07,1;UBERON:0010890,1.97e-07,1;UBERON:0002471,1.97e-07,1;UBERON:0001383,1.97e-07,1;UBERON:0004357,1.97e-07,1;UBERON:0004347,1.97e-07,1;UBERON:0005420,1.97e-07,1;UBERON:0005732,1.97e-07,1;UBERON:0010758,1.97e-07,1;UBERON:0010707,1.97e-07,1;UBERON:0000978,1.97e-07,1;UBERON:0002103,1.97e-07,1;UBERON:0001665,1.97e-07,1;UBERON:0003823,1.97e-07,1;UBERON:0000154,1.97e-07,1;UBERON:0010709,1.97e-07,1;UBERON:0005733,1.97e-07,1;UBERON:0005730,1.97e-0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=996 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1728 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=48bp_to_ENST00000528748_5end | |||
|description=CAGE_peak_4_at_CDC27_5end | |||
|id=chr17:45266228..45266253,- | |||
|ontology_enrichment_celltype=CL:0002139!9.47e-20!24;CL:0000071!8.99e-16!18;CL:0002546!8.99e-16!18;CL:0000115!1.63e-13!35;CL:0002078!4.93e-11!44;CL:0000213!4.35e-09!57;CL:0000215!4.35e-09!57;CL:1000413!1.51e-07!9;CL:0002543!6.61e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.50e-52;24!CL:0000115;9.10e-35;36!CL:0000071;8.99e-31;18!CL:0002078;2.31e-25;45!CL:0002138;3.37e-25;6!CL:0002144;2.16e-18;3!CL:0000213;3.70e-17;58!CL:0000215;3.70e-17;58!CL:1000413;1.10e-10;9!CL:0002543;2.75e-09;6!CL:0000136;7.09e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.49e-52,24;CL:0000115,2.01e-43,36;CL:0002078,4.97e-34,45;CL:0000071,1.84e-30,18;CL:0002546,1.84e-30,18;CL:0000213,1.32e-25,58;CL:0000215,1.32e-25,58;CL:0005020,1.73e-25,6;CL:0002138,1.73e-25,6;CL:0005022,1.73e-25,6;CL:0002144,3.19e-18,3;CL:1000413,1.86e-10,9;CL:0000222,1.96e-10,121;CL:0002543,2.38e-09,6;CL:0000076,1.78e-07,63;CL:0000136,7.72e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;8.99e-31;18!CL:0005022;3.37e-25;6!UBERON:0010226;3.84e-07;1!UBERON:0010115;3.84e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.99e-16!18;UBERON:0004638!8.99e-16!18;UBERON:0004852!8.99e-16!18;UBERON:0006914!1.94e-12!25;UBERON:0000487!1.12e-11!22;UBERON:0007023!2.19e-11!115;UBERON:0000055!3.39e-10!69;UBERON:0001009!4.70e-09!113;UBERON:0004535!5.25e-09!110;UBERON:0004872!1.86e-08!84;UBERON:0002049!7.61e-08!79;UBERON:0007798!7.61e-08!79;UBERON:0001981!1.33e-07!60;UBERON:0007500!1.33e-07!60;UBERON:0004537!1.33e-07!60;UBERON:0006965!1.33e-07!60;UBERON:0003915!1.51e-07!9;UBERON:0004700!1.51e-07!9;UBERON:0001917!1.51e-07!9;UBERON:0000477!1.63e-07!286;UBERON:0003914!1.92e-07!118;UBERON:0004111!9.86e-07!241 | |||
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| |||
|short_description=p4@CDC27 | |||
}} |
Revision as of 14:08, 11 September 2013
Short description: | p4@CDC27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CDC27_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000528748_5end |
EntrezGene: | CDC27 |
HGNC: | 1728 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.49e-52 | 24 |
endothelial cell | 2.01e-43 | 36 |
meso-epithelial cell | 4.97e-34 | 45 |
blood vessel endothelial cell | 1.84e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.84e-30 | 18 |
lining cell | 1.32e-25 | 58 |
barrier cell | 1.32e-25 | 58 |
lymphangioblast | 1.73e-25 | 6 |
endothelial cell of lymphatic vessel | 1.73e-25 | 6 |
vascular lymphangioblast | 1.73e-25 | 6 |
capillary endothelial cell | 3.19e-18 | 3 |
endothelial cell of artery | 1.86e-10 | 9 |
mesodermal cell | 1.96e-10 | 121 |
vein endothelial cell | 2.38e-09 | 6 |
squamous epithelial cell | 1.78e-07 | 63 |
fat cell | 7.72e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.