FFCP PHASE1:Hg19::chr16:86601052..86601066,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2303|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3801|TSSclassifier=S|UniProt=|association_with_transcript=111bp_to_BC111589_5end|description=CAGE_peak_4_at_FOXC2_5end|id=chr16:86601052..86601066,+|ontology_enrichment_celltype=CL:0000055!2.56e-19!180;CL:0000057!3.07e-13!75;CL:0000222!8.31e-13!119;CL:0000183!6.85e-08!59;CL:0000680!1.36e-07!57;CL:0000056!1.36e-07!57;CL:0000355!1.36e-07!57;CL:0000115!5.41e-07!35;CL:0000220!8.59e-07!246;CL:0002078!8.88e-07!44|ontology_enrichment_celltype_v019=CL:0002564;1.11e-08;3!CL:0002681;1.42e-07;12!CL:0002584;1.42e-07;12!CL:0002575;5.48e-07;2!CL:0000669;5.55e-07;4|ontology_enrichment_celltype_v019_2=CL:0000057,3.03e-10,76;CL:0002564,9.96e-09,3;CL:0002681,1.40e-07,12;CL:0002584,1.40e-07,12;CL:0002575,5.60e-07,2;CL:0000669,8.81e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!1.11e-17!79;UBERON:0007798!1.11e-17!79;UBERON:0001981!6.36e-14!60;UBERON:0007500!6.36e-14!60;UBERON:0004537!6.36e-14!60;UBERON:0006965!6.36e-14!60;UBERON:0000055!1.92e-13!69;UBERON:0004535!7.96e-13!110;UBERON:0004872!1.53e-12!84;UBERON:0001009!1.69e-12!113;UBERON:0001637!4.42e-11!42;UBERON:0003509!4.42e-11!42;UBERON:0004572!4.42e-11!42;UBERON:0000914!8.25e-11!83;UBERON:0002329!8.25e-11!83;UBERON:0003077!8.25e-11!83;UBERON:0003059!8.25e-11!83;UBERON:0007282!8.25e-11!83;UBERON:0009618!8.25e-11!83;UBERON:0007285!8.25e-11!83;UBERON:0003914!1.02e-09!118;UBERON:0005256!1.50e-09!143;UBERON:0000477!2.87e-08!286;UBERON:0004290!1.83e-07!70;UBERON:0000481!2.23e-07!347;UBERON:0000119!4.54e-07!312;UBERON:0000475!7.91e-07!365|ontology_enrichment_uberon_v019=UBERON:0011135;1.02e-08;5!UBERON:0002216;1.02e-08;5!UBERON:0011134;1.02e-08;5!UBERON:0002209;1.02e-08;5!UBERON:0002213;1.02e-08;5!UBERON:0007844;1.02e-08;5!UBERON:0011138;1.02e-08;5!UBERON:0001130;1.02e-08;5!UBERON:0001066;1.02e-08;5!UBERON:0001468;1.02e-08;5!UBERON:0002242;1.11e-08;3!UBERON:0000353;7.24e-08;15!UBERON:0001225;1.42e-07;12!UBERON:0008987;1.42e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.76e-09,78;UBERON:0007798,6.76e-09,78;UBERON:0002242,9.96e-09,3;UBERON:0003068,9.96e-09,3;UBERON:0002328,9.96e-09,3;UBERON:0004880,9.96e-09,3;UBERON:0011135,1.27e-08,5;UBERON:0002216,1.27e-08,5;UBERON:0011134,1.27e-08,5;UBERON:0002209,1.27e-08,5;UBERON:0002213,1.27e-08,5;UBERON:0005856,1.27e-08,5;UBERON:0005866,1.27e-08,5;UBERON:0005863,1.27e-08,5;UBERON:0007844,1.27e-08,5;UBERON:0011138,1.27e-08,5;UBERON:0001130,1.27e-08,5;UBERON:0001066,1.27e-08,5;UBERON:0001468,1.27e-08,5;UBERON:0001637,3.55e-08,42;UBERON:0003509,3.55e-08,42;UBERON:0004572,3.55e-08,42;UBERON:0000353,6.71e-08,15;UBERON:0001225,1.40e-07,12;UBERON:0008987,1.40e-07,12;UBERON:0004535,2.14e-07,109;UBERON:0001009,4.68e-07,112|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0.218441372130172,0,1.11389717664042,0.994192127183747,0,0,0.730310090387373,0,0.61560529038394,3.26401105990805,0,0.572471974262113,0.684372125364421,1.38096903554283,0,0.246301768349837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,1.94653948121054,0.945348171640679,4.21285855178871,2.19586964232815,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,2.75118041940067,1.67195973229448,0.258416759169329,0,0,0,0,0.732186172644509,0,7.29127753093584,0.714397826272638,0.673588117878509,0.225222960966644,0,0.949265659568129,0.916008719652036,0,0,0,0.993943903390637,1.2663051166458,0.264818361626438,0.573673241497627,1.77334191099179,0,3.20246987189115,3.94668077467456,0,0.134710672069688,0.163461903113459,1.21085942115945,1.72852777344,0.234321431833797,0.624320153660641,0,1.04614076386261,1.05691048779388,1.29498355494505,0.702254033511242,0.204154171254893,1.84251475967652,2.06651562351531,1.18800285728205,0.494533858557114,0,0,0.168336113954066,2.37725187756732,0.277064115484183,0,2.14541457059314,0.300476117813194,0.113432183160021,0,0,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0.337552664482532,0.584622030967192,0.252433774244115,0,0,0,0.302256294682921,0.67824236924195,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0.241011029883482,0.330881918197182,0.435758888184812,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,2.07986957055916,1.44331342025273,0.231860809950154,0.234817388471643,0.433099343283221,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0.87192013766656,1.24675085895615,0.38781514727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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3801 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=111bp_to_BC111589_5end | |||
|description=CAGE_peak_4_at_FOXC2_5end | |||
|id=chr16:86601052..86601066,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.56e-19!180;CL:0000057!3.07e-13!75;CL:0000222!8.31e-13!119;CL:0000183!6.85e-08!59;CL:0000680!1.36e-07!57;CL:0000056!1.36e-07!57;CL:0000355!1.36e-07!57;CL:0000115!5.41e-07!35;CL:0000220!8.59e-07!246;CL:0002078!8.88e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.11e-08;3!CL:0002681;1.42e-07;12!CL:0002584;1.42e-07;12!CL:0002575;5.48e-07;2!CL:0000669;5.55e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.03e-10,76;CL:0002564,9.96e-09,3;CL:0002681,1.40e-07,12;CL:0002584,1.40e-07,12;CL:0002575,5.60e-07,2;CL:0000669,8.81e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.11e-17!79;UBERON:0007798!1.11e-17!79;UBERON:0001981!6.36e-14!60;UBERON:0007500!6.36e-14!60;UBERON:0004537!6.36e-14!60;UBERON:0006965!6.36e-14!60;UBERON:0000055!1.92e-13!69;UBERON:0004535!7.96e-13!110;UBERON:0004872!1.53e-12!84;UBERON:0001009!1.69e-12!113;UBERON:0001637!4.42e-11!42;UBERON:0003509!4.42e-11!42;UBERON:0004572!4.42e-11!42;UBERON:0000914!8.25e-11!83;UBERON:0002329!8.25e-11!83;UBERON:0003077!8.25e-11!83;UBERON:0003059!8.25e-11!83;UBERON:0007282!8.25e-11!83;UBERON:0009618!8.25e-11!83;UBERON:0007285!8.25e-11!83;UBERON:0003914!1.02e-09!118;UBERON:0005256!1.50e-09!143;UBERON:0000477!2.87e-08!286;UBERON:0004290!1.83e-07!70;UBERON:0000481!2.23e-07!347;UBERON:0000119!4.54e-07!312;UBERON:0000475!7.91e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.02e-08;5!UBERON:0002216;1.02e-08;5!UBERON:0011134;1.02e-08;5!UBERON:0002209;1.02e-08;5!UBERON:0002213;1.02e-08;5!UBERON:0007844;1.02e-08;5!UBERON:0011138;1.02e-08;5!UBERON:0001130;1.02e-08;5!UBERON:0001066;1.02e-08;5!UBERON:0001468;1.02e-08;5!UBERON:0002242;1.11e-08;3!UBERON:0000353;7.24e-08;15!UBERON:0001225;1.42e-07;12!UBERON:0008987;1.42e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.76e-09,78;UBERON:0007798,6.76e-09,78;UBERON:0002242,9.96e-09,3;UBERON:0003068,9.96e-09,3;UBERON:0002328,9.96e-09,3;UBERON:0004880,9.96e-09,3;UBERON:0011135,1.27e-08,5;UBERON:0002216,1.27e-08,5;UBERON:0011134,1.27e-08,5;UBERON:0002209,1.27e-08,5;UBERON:0002213,1.27e-08,5;UBERON:0005856,1.27e-08,5;UBERON:0005866,1.27e-08,5;UBERON:0005863,1.27e-08,5;UBERON:0007844,1.27e-08,5;UBERON:0011138,1.27e-08,5;UBERON:0001130,1.27e-08,5;UBERON:0001066,1.27e-08,5;UBERON:0001468,1.27e-08,5;UBERON:0001637,3.55e-08,42;UBERON:0003509,3.55e-08,42;UBERON:0004572,3.55e-08,42;UBERON:0000353,6.71e-08,15;UBERON:0001225,1.40e-07,12;UBERON:0008987,1.40e-07,12;UBERON:0004535,2.14e-07,109;UBERON:0001009,4.68e-07,112 | |||
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| |||
|short_description=p4@FOXC2 | |||
}} |
Revision as of 11:55, 11 September 2013
Short description: | p4@FOXC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FOXC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 111bp_to_BC111589_5end |
EntrezGene: | FOXC2 |
HGNC: | 3801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.03e-10 | 76 |
nucleus pulposus cell of intervertebral disc | 9.96e-09 | 3 |
kidney cortical cell | 1.40e-07 | 12 |
renal cortical epithelial cell | 1.40e-07 | 12 |
central nervous system pericyte | 5.60e-07 | 2 |
pericyte cell | 8.81e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vasculature | 6.76e-09 | 78 |
vascular system | 6.76e-09 | 78 |
nucleus pulposus | 9.96e-09 | 3 |
axial mesoderm | 9.96e-09 | 3 |
notochord | 9.96e-09 | 3 |
chordamesoderm | 9.96e-09 | 3 |
intervertebral cartilage | 1.27e-08 | 5 |
symphysis | 1.27e-08 | 5 |
nonsynovial joint | 1.27e-08 | 5 |
fibrous joint | 1.27e-08 | 5 |
cartilaginous joint | 1.27e-08 | 5 |
developing mesenchymal condensation | 1.27e-08 | 5 |
pre-cartilage condensation | 1.27e-08 | 5 |
cartilaginous condensation | 1.27e-08 | 5 |
cartilage element | 1.27e-08 | 5 |
post-cranial axial skeletal system | 1.27e-08 | 5 |
vertebral column | 1.27e-08 | 5 |
intervertebral disk | 1.27e-08 | 5 |
intervertebral joint | 1.27e-08 | 5 |
artery | 3.55e-08 | 42 |
arterial blood vessel | 3.55e-08 | 42 |
arterial system | 3.55e-08 | 42 |
parenchyma | 6.71e-08 | 15 |
cortex of kidney | 1.40e-07 | 12 |
renal parenchyma | 1.40e-07 | 12 |
cardiovascular system | 2.14e-07 | 109 |
circulatory system | 4.68e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.