FFCP PHASE1:Hg19::chr14:29234618..29234628,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2290|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3811|TSSclassifier=W|UniProt=P55316|association_with_transcript=-421bp_to_ENST00000382535_5end|coexpression_cluster_id=C10|description=CAGE_peak_8_at_FOXG1_5end|id=chr14:29234618..29234628,+|ontology_enrichment_celltype=CL:0002319!8.91e-12!25;CL:0000047!6.53e-08!8;CL:0002605!6.56e-08!3;CL:0000133!1.17e-07!59;CL:0000243!3.76e-07!15;CL:0000125!3.76e-07!15;CL:0000030!3.76e-07!15;CL:0000339!3.76e-07!15;CL:0000064!3.79e-07!3;CL:0005012!3.79e-07!3;CL:0000067!3.79e-07!3;CL:0002304!3.79e-07!3|ontology_enrichment_celltype_v019=CL:0002605;1.41e-14;3!CL:0000047;7.90e-11;2!CL:0002319;3.57e-10;25!CL:0000540;6.40e-08;6!CL:0000404;6.40e-08;6|ontology_enrichment_celltype_v019_2=CL:0000047,3.45e-15,8;CL:0002605,2.86e-14,3;CL:0002319,4.41e-10,25;CL:0000540,5.90e-08,6;CL:0000031,5.90e-08,6;CL:0000404,5.90e-08,6|ontology_enrichment_development_v019=UBERON:0010122;3.24e-11;2!UBERON:0006601;1.32e-10;82!CL:0000031;6.40e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001869!1.28e-70!32;UBERON:0001893!2.54e-70!34;UBERON:0002780!1.85e-68!41;UBERON:0001890!1.85e-68!41;UBERON:0006240!1.85e-68!41;UBERON:0002791!3.79e-68!33;UBERON:0003080!1.33e-66!42;UBERON:0002020!1.01e-61!34;UBERON:0003528!1.01e-61!34;UBERON:0001017!2.20e-58!82;UBERON:0003056!4.45e-56!61;UBERON:0005743!4.57e-55!86;UBERON:0000956!1.74e-54!25;UBERON:0000203!1.74e-54!25;UBERON:0000073!4.80e-53!94;UBERON:0001016!4.80e-53!94;UBERON:0000955!1.91e-50!69;UBERON:0006238!1.91e-50!69;UBERON:0002619!4.36e-48!22;UBERON:0001049!1.93e-46!57;UBERON:0005068!1.93e-46!57;UBERON:0006241!1.93e-46!57;UBERON:0007135!1.93e-46!57;UBERON:0002616!1.61e-44!59;UBERON:0001950!1.03e-43!20;UBERON:0003075!1.41e-40!86;UBERON:0007284!1.41e-40!86;UBERON:0002346!3.15e-38!90;UBERON:0000153!1.80e-34!129;UBERON:0007811!1.80e-34!129;UBERON:0000033!1.30e-33!123;UBERON:0004121!8.65e-30!169;UBERON:0000924!9.24e-29!173;UBERON:0006601!9.24e-29!173;UBERON:0007023!6.15e-19!115;UBERON:0002420!3.67e-17!9;UBERON:0007245!3.67e-17!9;UBERON:0010009!3.67e-17!9;UBERON:0010011!3.67e-17!9;UBERON:0000454!3.67e-17!9;UBERON:0001871!6.08e-15!7;UBERON:0000200!9.73e-15!6;UBERON:0009663!6.83e-13!7;UBERON:0001872!8.61e-13!5;UBERON:0002021!1.23e-12!5;UBERON:0000349!1.89e-12!5;UBERON:0000025!2.32e-11!194;UBERON:0000369!6.09e-11!4;UBERON:0002435!6.09e-11!4;UBERON:0000204!6.09e-11!4;UBERON:0010082!6.09e-11!4;UBERON:0002308!8.03e-10!9;UBERON:0000125!8.03e-10!9;UBERON:0000483!1.54e-09!309;UBERON:0000064!2.22e-09!219;UBERON:0000119!2.56e-09!312;UBERON:0005383!8.36e-09!3;UBERON:0005382!8.36e-09!3;UBERON:0002771!2.47e-08!3;UBERON:0000477!8.54e-08!286;UBERON:0000475!1.64e-07!365;UBERON:0001778!3.79e-07!3;UBERON:0001775!3.79e-07!3;UBERON:0004111!4.04e-07!241|ontology_enrichment_uberon_v019=UBERON:0001869;2.10e-106;32!UBERON:0002791;4.38e-100;32!UBERON:0001893;1.04e-96;34!UBERON:0000956;1.95e-92;25!UBERON:0000203;1.95e-92;25!UBERON:0003528;3.72e-92;34!UBERON:0002020;3.72e-92;34!UBERON:0002619;2.22e-79;22!UBERON:0001950;1.56e-78;20!UBERON:0002780;1.23e-73;41!UBERON:0001890;1.23e-73;41!UBERON:0000073;1.15e-43;53!UBERON:0002616;1.15e-43;53!UBERON:0000955;7.93e-38;68!UBERON:0001017;7.67e-34;75!UBERON:0000200;6.53e-28;6!UBERON:0002420;6.09e-26;9!UBERON:0007245;6.09e-26;9!UBERON:0010009;6.09e-26;9!UBERON:0010011;6.09e-26;9!UBERON:0000454;6.09e-26;9!UBERON:0001016;5.48e-25;83!UBERON:0001871;2.28e-24;6!UBERON:0001872;3.00e-24;5!UBERON:0000369;2.45e-20;4!UBERON:0002435;2.45e-20;4!UBERON:0000204;2.45e-20;4!UBERON:0009663;7.52e-18;7!UBERON:0005383;4.43e-16;3!UBERON:0005382;4.43e-16;3!UBERON:0002021;9.40e-16;5!UBERON:0000349;2.21e-15;5!UBERON:0001870;6.55e-15;3!UBERON:0000125;7.95e-14;9!UBERON:0002308;7.95e-14;9!UBERON:0001873;3.24e-11;2!UBERON:0002771;7.90e-11;2!UBERON:0001876;2.72e-10;2!UBERON:0001897;2.72e-10;2!UBERON:0002702;2.72e-10;2!UBERON:0010225;2.72e-10;2!UBERON:0011216;6.90e-09;132!UBERON:0007023;2.79e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.30e-116,32;UBERON:0001893,1.38e-109,34;UBERON:0002791,1.08e-108,32;UBERON:0002780,1.88e-103,41;UBERON:0001890,1.88e-103,41;UBERON:0003080,1.88e-103,41;UBERON:0006240,1.88e-103,41;UBERON:0003528,3.97e-102,34;UBERON:0002020,3.97e-102,34;UBERON:0000956,2.54e-92,25;UBERON:0000203,2.54e-92,25;UBERON:0001017,4.84e-81,81;UBERON:0002619,1.52e-79,22;UBERON:0000073,5.44e-79,53;UBERON:0002616,5.44e-79,53;UBERON:0001950,1.20e-78,20;UBERON:0001049,1.75e-74,56;UBERON:0005068,1.75e-74,56;UBERON:0006241,1.75e-74,56;UBERON:0007135,1.75e-74,56;UBERON:0001016,2.15e-72,89;UBERON:0000955,5.23e-68,68;UBERON:0006238,5.23e-68,68;UBERON:0003056,6.13e-68,61;UBERON:0003075,4.67e-49,82;UBERON:0007284,4.67e-49,82;UBERON:0002346,1.71e-46,86;UBERON:0010371,2.28e-37,104;UBERON:0004121,9.15e-35,171;UBERON:0000924,9.15e-35,171;UBERON:0006601,9.15e-35,171;UBERON:0010314,4.43e-28,132;UBERON:0000200,5.84e-28,6;UBERON:0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3811 | |||
|TSSclassifier=W | |||
|UniProt=P55316 | |||
|association_with_transcript=-421bp_to_ENST00000382535_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_8_at_FOXG1_5end | |||
|id=chr14:29234618..29234628,+ | |||
|ontology_enrichment_celltype=CL:0002319!8.91e-12!25;CL:0000047!6.53e-08!8;CL:0002605!6.56e-08!3;CL:0000133!1.17e-07!59;CL:0000243!3.76e-07!15;CL:0000125!3.76e-07!15;CL:0000030!3.76e-07!15;CL:0000339!3.76e-07!15;CL:0000064!3.79e-07!3;CL:0005012!3.79e-07!3;CL:0000067!3.79e-07!3;CL:0002304!3.79e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.41e-14;3!CL:0000047;7.90e-11;2!CL:0002319;3.57e-10;25!CL:0000540;6.40e-08;6!CL:0000404;6.40e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.45e-15,8;CL:0002605,2.86e-14,3;CL:0002319,4.41e-10,25;CL:0000540,5.90e-08,6;CL:0000031,5.90e-08,6;CL:0000404,5.90e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.24e-11;2!UBERON:0006601;1.32e-10;82!CL:0000031;6.40e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@FOXG1 | |||
}} |
Revision as of 04:15, 11 September 2013
Short description: | p8@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_FOXG1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -421bp_to_ENST00000382535_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | P55316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.45e-15 | 8 |
astrocyte of the cerebral cortex | 2.86e-14 | 3 |
neural cell | 4.41e-10 | 25 |
neuron | 5.90e-08 | 6 |
neuroblast | 5.90e-08 | 6 |
electrically signaling cell | 5.90e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.