FFCP PHASE1:Hg19::chr12:56473910..56473921,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2065|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3431|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000411731_5end|coexpression_cluster_id=C3299|description=CAGE_peak_4_at_ERBB3_5end|id=chr12:56473910..56473921,+|ontology_enrichment_celltype=CL:0000223!3.18e-07!59|ontology_enrichment_celltype_v019=CL:0002541;3.34e-07;3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.06e-07;82|ontology_enrichment_disease=DOID:305!4.70e-11!106;DOID:299!4.94e-09!25;DOID:0050687!5.31e-09!143|ontology_enrichment_disease_v019=DOID:5093;9.80e-11;4!DOID:1612;9.80e-11;4|ontology_enrichment_disease_v019_2=DOID:5093,1.26e-10,4;DOID:1612,1.26e-10,4|ontology_enrichment_uberon=UBERON:0007023!2.49e-29!115;UBERON:0001049!2.07e-16!57;UBERON:0005068!2.07e-16!57;UBERON:0006241!2.07e-16!57;UBERON:0007135!2.07e-16!57;UBERON:0000062!9.90e-14!511;UBERON:0001007!1.46e-13!155;UBERON:0001555!1.46e-13!155;UBERON:0007026!1.46e-13!155;UBERON:0004119!7.21e-13!169;UBERON:0000925!7.21e-13!169;UBERON:0006595!7.21e-13!169;UBERON:0004921!1.77e-12!129;UBERON:0004185!1.77e-12!129;UBERON:0003080!1.86e-12!42;UBERON:0002616!4.73e-12!59;UBERON:0001893!6.62e-12!34;UBERON:0002780!6.75e-12!41;UBERON:0001890!6.75e-12!41;UBERON:0006240!6.75e-12!41;UBERON:0002020!7.03e-12!34;UBERON:0003528!7.03e-12!34;UBERON:0005743!1.62e-11!86;UBERON:0001017!2.60e-11!82;UBERON:0002791!2.72e-11!33;UBERON:0000064!4.62e-11!219;UBERON:0003075!7.33e-11!86;UBERON:0007284!7.33e-11!86;UBERON:0004121!1.66e-10!169;UBERON:0000475!1.82e-10!365;UBERON:0001869!2.92e-10!32;UBERON:0000955!3.72e-10!69;UBERON:0006238!3.72e-10!69;UBERON:0000077!5.70e-10!130;UBERON:0000073!6.64e-10!94;UBERON:0001016!6.64e-10!94;UBERON:0000924!8.19e-10!173;UBERON:0006601!8.19e-10!173;UBERON:0002346!8.62e-10!90;UBERON:0000153!1.15e-09!129;UBERON:0007811!1.15e-09!129;UBERON:0000033!6.83e-09!123;UBERON:0002619!1.40e-08!22;UBERON:0000481!1.60e-08!347;UBERON:0003056!2.15e-08!61;UBERON:0004111!5.22e-08!241;UBERON:0002298!6.95e-08!8;UBERON:0005911!8.20e-08!82;UBERON:0000468!1.51e-07!659;UBERON:0003929!2.20e-07!54;UBERON:0001950!2.52e-07!20;UBERON:0002308!4.53e-07!9;UBERON:0000125!4.53e-07!9;UBERON:0000956!5.28e-07!25;UBERON:0000203!5.28e-07!25|ontology_enrichment_uberon_v019=UBERON:0005409;8.91e-13;22!UBERON:0004921;2.95e-12;33!UBERON:0000125;5.84e-12;9!UBERON:0002308;5.84e-12;9!UBERON:0003528;6.16e-12;34!UBERON:0002020;6.16e-12;34!UBERON:0000160;8.43e-12;17!UBERON:0002780;3.37e-11;41!UBERON:0001890;3.37e-11;41!UBERON:0001893;4.42e-11;34!UBERON:0002791;8.23e-11;32!UBERON:0001869;2.55e-09;32!UBERON:0002298;4.98e-09;6!UBERON:0009663;1.81e-08;7!UBERON:0000073;1.93e-08;53!UBERON:0002616;1.93e-08;53!UBERON:0002619;1.02e-07;22!UBERON:0000059;1.24e-07;11!UBERON:0000988;3.34e-07;3!UBERON:0003124;3.34e-07;3!UBERON:0000920;3.34e-07;3!UBERON:0007023;5.33e-07;114!UBERON:0001950;5.54e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.34e-24,114;UBERON:0001049,2.03e-18,56;UBERON:0005068,2.03e-18,56;UBERON:0006241,2.03e-18,56;UBERON:0007135,2.03e-18,56;UBERON:0011216,1.55e-17,223;UBERON:0000073,3.65e-16,53;UBERON:0002616,3.65e-16,53;UBERON:0003528,2.07e-14,34;UBERON:0002020,2.07e-14,34;UBERON:0000955,1.23e-13,68;UBERON:0006238,1.23e-13,68;UBERON:0002780,3.38e-13,41;UBERON:0001890,3.38e-13,41;UBERON:0003080,3.38e-13,41;UBERON:0006240,3.38e-13,41;UBERON:0001017,7.42e-13,81;UBERON:0001893,7.72e-13,34;UBERON:0003075,9.73e-13,82;UBERON:0007284,9.73e-13,82;UBERON:0001016,5.67e-12,89;UBERON:0000125,6.28e-12,9;UBERON:0002308,6.28e-12,9;UBERON:0000160,6.43e-12,17;UBERON:0002791,7.37e-12,32;UBERON:0002346,7.89e-12,86;UBERON:0010371,2.39e-11,104;UBERON:0005409,5.02e-11,25;UBERON:0004121,5.55e-11,171;UBERON:0000924,5.55e-11,171;UBERON:0006601,5.55e-11,171;UBERON:0001869,4.11e-10,32;UBERON:0003056,1.40e-09,61;UBERON:0002298,4.90e-09,6;UBERON:0009663,2.08e-08,7;UBERON:0004921,6.95e-08,118;UBERON:0000059,9.87e-08,11;UBERON:0002619,1.01e-07,22;UBERON:0000988,2.43e-07,3;UBERON:0001950,4.74e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.737201809504527,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0.132529768321485,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,1.96781501668982,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,3.1608175918371,2.57545848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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3431 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000411731_5end | |||
|coexpression_cluster_id=C3299 | |||
|description=CAGE_peak_4_at_ERBB3_5end | |||
|id=chr12:56473910..56473921,+ | |||
|ontology_enrichment_celltype=CL:0000223!3.18e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-07;82 | |||
|ontology_enrichment_disease=DOID:305!4.70e-11!106;DOID:299!4.94e-09!25;DOID:0050687!5.31e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;9.80e-11;4!DOID:1612;9.80e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.26e-10,4;DOID:1612,1.26e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.49e-29!115;UBERON:0001049!2.07e-16!57;UBERON:0005068!2.07e-16!57;UBERON:0006241!2.07e-16!57;UBERON:0007135!2.07e-16!57;UBERON:0000062!9.90e-14!511;UBERON:0001007!1.46e-13!155;UBERON:0001555!1.46e-13!155;UBERON:0007026!1.46e-13!155;UBERON:0004119!7.21e-13!169;UBERON:0000925!7.21e-13!169;UBERON:0006595!7.21e-13!169;UBERON:0004921!1.77e-12!129;UBERON:0004185!1.77e-12!129;UBERON:0003080!1.86e-12!42;UBERON:0002616!4.73e-12!59;UBERON:0001893!6.62e-12!34;UBERON:0002780!6.75e-12!41;UBERON:0001890!6.75e-12!41;UBERON:0006240!6.75e-12!41;UBERON:0002020!7.03e-12!34;UBERON:0003528!7.03e-12!34;UBERON:0005743!1.62e-11!86;UBERON:0001017!2.60e-11!82;UBERON:0002791!2.72e-11!33;UBERON:0000064!4.62e-11!219;UBERON:0003075!7.33e-11!86;UBERON:0007284!7.33e-11!86;UBERON:0004121!1.66e-10!169;UBERON:0000475!1.82e-10!365;UBERON:0001869!2.92e-10!32;UBERON:0000955!3.72e-10!69;UBERON:0006238!3.72e-10!69;UBERON:0000077!5.70e-10!130;UBERON:0000073!6.64e-10!94;UBERON:0001016!6.64e-10!94;UBERON:0000924!8.19e-10!173;UBERON:0006601!8.19e-10!173;UBERON:0002346!8.62e-10!90;UBERON:0000153!1.15e-09!129;UBERON:0007811!1.15e-09!129;UBERON:0000033!6.83e-09!123;UBERON:0002619!1.40e-08!22;UBERON:0000481!1.60e-08!347;UBERON:0003056!2.15e-08!61;UBERON:0004111!5.22e-08!241;UBERON:0002298!6.95e-08!8;UBERON:0005911!8.20e-08!82;UBERON:0000468!1.51e-07!659;UBERON:0003929!2.20e-07!54;UBERON:0001950!2.52e-07!20;UBERON:0002308!4.53e-07!9;UBERON:0000125!4.53e-07!9;UBERON:0000956!5.28e-07!25;UBERON:0000203!5.28e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.91e-13;22!UBERON:0004921;2.95e-12;33!UBERON:0000125;5.84e-12;9!UBERON:0002308;5.84e-12;9!UBERON:0003528;6.16e-12;34!UBERON:0002020;6.16e-12;34!UBERON:0000160;8.43e-12;17!UBERON:0002780;3.37e-11;41!UBERON:0001890;3.37e-11;41!UBERON:0001893;4.42e-11;34!UBERON:0002791;8.23e-11;32!UBERON:0001869;2.55e-09;32!UBERON:0002298;4.98e-09;6!UBERON:0009663;1.81e-08;7!UBERON:0000073;1.93e-08;53!UBERON:0002616;1.93e-08;53!UBERON:0002619;1.02e-07;22!UBERON:0000059;1.24e-07;11!UBERON:0000988;3.34e-07;3!UBERON:0003124;3.34e-07;3!UBERON:0000920;3.34e-07;3!UBERON:0007023;5.33e-07;114!UBERON:0001950;5.54e-07;20 | |||
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| |||
|short_description=p4@ERBB3 | |||
}} |
Revision as of 23:30, 10 September 2013
Short description: | p4@ERBB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ERBB3_5end |
Coexpression cluster: | C3299_serous_signet_skeletal_optic_colon_breast_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000411731_5end |
EntrezGene: | ERBB3 |
HGNC: | 3431 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.26e-10 | 4 |
breast cancer | 1.26e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.