FFCP PHASE1:Hg19::chr12:3068196..3068232,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7004 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11717 | |||
|TSSclassifier=S | |||
|UniProt=Q15561,Q8NEV5 | |||
|association_with_transcript=-245bp_to_NM_003213,NM_201441_5end | |||
|description=CAGE_peak_9_at_TEAD4_5end | |||
|id=chr12:3068196..3068232,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.09e-12!24;CL:0000222!1.08e-11!119;CL:0000066!1.29e-11!254;CL:0000071!3.74e-11!18;CL:0002546!3.74e-11!18;CL:0000055!6.42e-11!180;CL:0002078!1.20e-10!44;CL:0002321!4.62e-10!248;CL:0000115!6.33e-10!35;CL:0000220!6.51e-10!246;CL:0000213!2.38e-09!57;CL:0000215!2.38e-09!57;CL:0000057!3.44e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.09e-31;24!CL:0000071;1.52e-29;18!CL:0000115;4.39e-25;36!CL:0002078;6.57e-19;45!CL:0000213;2.44e-12;58!CL:0000215;2.44e-12;58!CL:0002543;3.54e-12;6!CL:1000413;1.69e-11;9!CL:0002144;4.19e-10;3!CL:0002618;3.13e-09;3!CL:1000449;5.38e-09;15!CL:0002681;1.94e-08;12!CL:0002584;1.94e-08;12!CL:1000497;8.27e-08;17!CL:0002518;8.27e-08;17!CL:0000039;5.92e-07;7!CL:1000746;5.92e-07;7!CL:1000612;5.92e-07;7!CL:0000586;5.92e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.63e-33,24;CL:0000115,7.24e-32,36;CL:0000071,1.12e-30,18;CL:0002546,1.12e-30,18;CL:0002078,1.09e-29,45;CL:0000213,1.52e-21,58;CL:0000215,1.52e-21,58;CL:0000222,2.53e-14,121;CL:0002543,1.30e-12,6;CL:1000413,5.93e-12,9;CL:0002144,2.36e-10,3;CL:0002618,1.17e-09,3;CL:1000449,6.18e-09,15;CL:0000076,1.54e-08,63;CL:0002681,2.23e-08,12;CL:0002584,2.23e-08,12;CL:1000497,9.32e-08,17;CL:0002518,9.32e-08,17;CL:0002321,1.58e-07,250;CL:0000039,4.64e-07,7;CL:0000586,4.64e-07,7;CL:0000066,4.87e-07,253;CL:1000746,6.10e-07,7;CL:1000612,6.10e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.52e-29;18 | |||
|ontology_enrichment_disease=DOID:0050687!3.40e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.74e-11!18;UBERON:0004638!3.74e-11!18;UBERON:0004852!3.74e-11!18;UBERON:0003914!5.24e-11!118;UBERON:0002049!1.17e-09!79;UBERON:0007798!1.17e-09!79;UBERON:0000487!1.25e-09!22;UBERON:0006914!1.56e-09!25;UBERON:0002100!3.03e-09!216;UBERON:0004872!3.72e-09!84;UBERON:0003104!5.16e-08!238;UBERON:0009142!5.16e-08!238;UBERON:0000055!8.23e-08!69;UBERON:0001981!1.01e-07!60;UBERON:0007500!1.01e-07!60;UBERON:0004537!1.01e-07!60;UBERON:0006965!1.01e-07!60;UBERON:0005256!2.23e-07!143;UBERON:0000926!2.28e-07!448;UBERON:0004120!2.28e-07!448;UBERON:0006603!2.28e-07!448;UBERON:0000468!2.73e-07!659;UBERON:0000490!6.37e-07!138;UBERON:0000477!8.55e-07!286;UBERON:0001009!8.95e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.52e-29;18!UBERON:0001986;1.52e-29;18!UBERON:0004852;1.52e-29;18!UBERON:0000487;4.48e-27;22!UBERON:0006914;2.34e-23;25!UBERON:0000490;2.35e-15;33!UBERON:0003915;1.69e-11;9!UBERON:0004700;1.69e-11;9!UBERON:0001917;1.69e-11;9!UBERON:0003914;1.06e-10;74!UBERON:0010523;4.19e-10;3!UBERON:0001915;4.19e-10;3!UBERON:0001982;4.19e-10;3!UBERON:0006555;5.38e-09;15!UBERON:0004819;5.38e-09;15!UBERON:0001285;5.38e-09;15!UBERON:0007684;5.38e-09;15!UBERON:0000353;8.28e-09;15!UBERON:0001225;1.94e-08;12!UBERON:0008987;1.94e-08;12!UBERON:0001638;5.37e-08;9!UBERON:0003920;5.37e-08;9!UBERON:0004582;5.37e-08;9!UBERON:0007500;2.15e-07;56!UBERON:0001981;2.15e-07;56!UBERON:0004537;2.15e-07;56!UBERON:0000074;5.92e-07;7!UBERON:0001229;5.92e-07;7!UBERON:0000055;8.47e-07;65!UBERON:0002113;9.97e-07;24!UBERON:0011143;9.97e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.12e-30,18;UBERON:0001986,1.12e-30,18;UBERON:0004852,1.12e-30,18;UBERON:0000487,3.89e-28,22;UBERON:0006914,2.80e-24,25;UBERON:0003914,9.37e-14,117;UBERON:0000055,1.10e-12,68;UBERON:0003915,5.93e-12,9;UBERON:0004700,5.93e-12,9;UBERON:0001917,5.93e-12,9;UBERON:0002049,1.29e-11,78;UBERON:0007798,1.29e-11,78;UBERON:0007500,1.11e-10,59;UBERON:0001981,1.11e-10,59;UBERON:0004537,1.11e-10,59;UBERON:0006965,1.11e-10,59;UBERON:0004872,1.54e-10,83;UBERON:0010523,2.36e-10,3;UBERON:0001915,2.36e-10,3;UBERON:0001982,2.36e-10,3;UBERON:0004535,1.77e-09,109;UBERON:0001009,4.52e-09,112;UBERON:0004211,6.18e-09,15;UBERON:0009773,6.18e-09,15;UBERON:0001231,6.18e-09,15;UBERON:0001285,6.18e-09,15;UBERON:0007684,6.18e-09,15;UBERON:0004208,6.18e-09,15;UBERON:0000353,8.48e-09,15;UBERON:0001225,2.23e-08,12;UBERON:0008987,2.23e-08,12;UBERON:0006555,2.61e-08,16;UBERON:0004819,2.61e-08,16;UBERON:0001638,2.82e-08,9;UBERON:0003920,2.82e-08,9;UBERON:0004582,2.82e-08,9;UBERON:0000490,1.08e-07,148;UBERON:0010532,6.10e-07,7;UBERON:0000074,6.10e-07,7;UBERON:0001229,6.10e-07,7;UBERON:0001230,6.10e-07,7;UBERON:0003220,6.10e-07,7;UBERON:0005749,6.10e-07,7;UBERON:0004199,6.10e-07,7;UBERON:0004209,6.10e-07,7;UBERON:0004198,6.10e-07,7;UBERON:0004111,7.08e-07,240;UBERON:0000058,9.95e-07,19 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,1.39560233594486,0.655324116390517,0.263766978228454,0.37129905888014,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0.816002764977012,0,0,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.327447688744282,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,1.59009925893364,1.72046919021225,1.38856200643038,0,2.51699661725944,2.75118041940067,1.25396979922086,1.55050055501597,1.77883131343355,0.33472061276467,1.61131726843659,2.28081631715554,2.4406205754817,0.367663080345869,0.81014194788176,1.16089646769304,1.79623498100936,1.57656072676651,1.53316637465883,0.949265659568129,2.01521918323448,0,0,0,0,0.379891534993739,0.264818361626438,0.573673241497627,1.06400514659507,1.12135520028461,1.06748995729705,0.24666754841716,0,0.404132016209064,0.490385709340376,0.151357427644931,0.576175924479999,0.937285727335186,0.624320153660641,0.570471821544449,0.896692083310806,0.23486899728753,0.485618833104395,0.280901613404497,0.816616685019573,0.859840221182376,0.516628905878827,1.18800285728205,0.247266929278557,0,0,0.505008341862199,0.500474079487857,0,0.877955241761676,0.30648779579902,0.751190294532984,0.567160915800105,0.538168907066586,0.427114777637135,0.211931901159562,0,0.206105058476878,0.515281080091258,0,0.337552664482532,0.487185025805993,0.252433774244115,0.368199594569197,0.646584227275248,0,0.302256294682921,0.508681776931463,0.386521706326594,0,0.286804595389004,0.243947412259191,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0.36497735907583,0,1.28648187638577,2.76269842704961,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.55146986366197,1.30727666455444,0,0.674156540800822,0,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,1.15493158208859,0,0.380508304469197,0.790204397959275,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0.581267877027924,0,0,0,0,0,0,0.952468414382536,0.763976851116555,0,0,0.205654985406647,0.901029173531752,0.571652865261156,1.00917975910825,0,1.10007428731425,0.387815147273333,0,0,0,0,0.257207374262142,0,0.266422179016099,0.428933980974443,1.08524321078289,0,0,1.06617584622764,0,0,0,0.299918973546171,0,0,0,1.19812427745791,3.44585807502342,1.42636905040718,0.723906533337896,0.61642896765115,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,0.415941723061614,0.713715955188647,0.473107245101804,0.35142424497814,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.347534457872331,0.195801157462741,2.05886054286514,0,0,0,0.303127571446259,3.32870879020994,0.30239029332968,0.496215615637554,0.460385919864187,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.462629081407967,0.355123450626254,0.328508624055237,0,0.464841513839837,0.120859449591622,0,0.0920809889358963,0.574072240823034,0,1.04899531967539,0.451199612907412,0.15403067420883,2.35304930753057,0,0.105551628892876,0,1.19065593693561,1.29549549661284,0,0.541892875087706,2.00675909541941,0.509752546090077,2.49322802678617,1.11937377361089,0,0,0.512900250232778,0,0,0.103041011647722,0.640986253728404,0.165018999841176,0,0,0,0.580024309752732,0.154048617114644,0.921022048356777,0.551346289938122,0.107420244868274,0.145016693914229,0.426133137080504,1.51354460599453,0.165284915360978,0.192190067365106,0.127612712494584,0,0.464845549297286,0,0,0.308033580176089,0,0,0.37064843820784,0,1.116475108079,0,0.571890581771475,1.02359116524534,0.855877976067841,0.636406495851874,1.56989728039846,0,0.823611089208164,0.824686816419805,0.606547444719948,0,0.421258456238981,0,0.243713489631284,0,0.409499734223957,0.565621727814851,0,0.551365343546124,0.66343897524122,0,0,0,0.405820753925408,0.6196469961995,0.563391205064483,0.143411352204052,0.392996164052485,0.7133421029625,0.354761064070598,0.211107635297664,0.329294892959902,0.75894634753143,0.699869440489966,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.735120647943095,0,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0.33307196799782,0,0.37428108081644,0.73254089635947,0.36408156524854,0,1.42068073403207,0.23874448473769,0.296964680832639,0,0,0,0.333926115068718,0,0,0,0,0.251932747854276,0.20453736500431,0,0.622079175323615,0.808815160325942,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0.260427761085233,0.262379999988587,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0.21787692703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| |||
|short_description=p9@TEAD4 | |||
}} |
Revision as of 22:24, 10 September 2013
Short description: | p9@TEAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TEAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -245bp_to_NM_003213, NM_201441_5end |
EntrezGene: | TEAD4 |
HGNC: | 11717 |
UniProt: | Q15561Q8NEV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.63e-33 | 24 |
endothelial cell | 7.24e-32 | 36 |
blood vessel endothelial cell | 1.12e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.12e-30 | 18 |
meso-epithelial cell | 1.09e-29 | 45 |
lining cell | 1.52e-21 | 58 |
barrier cell | 1.52e-21 | 58 |
mesodermal cell | 2.53e-14 | 121 |
vein endothelial cell | 1.30e-12 | 6 |
endothelial cell of artery | 5.93e-12 | 9 |
capillary endothelial cell | 2.36e-10 | 3 |
endothelial cell of umbilical vein | 1.17e-09 | 3 |
epithelial cell of nephron | 6.18e-09 | 15 |
squamous epithelial cell | 1.54e-08 | 63 |
kidney cortical cell | 2.23e-08 | 12 |
renal cortical epithelial cell | 2.23e-08 | 12 |
kidney cell | 9.32e-08 | 17 |
kidney epithelial cell | 9.32e-08 | 17 |
embryonic cell | 1.58e-07 | 250 |
germ line cell | 4.64e-07 | 7 |
germ cell | 4.64e-07 | 7 |
epithelial cell | 4.87e-07 | 253 |
glomerular cell | 6.10e-07 | 7 |
kidney corpuscule cell | 6.10e-07 | 7 |
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