FFCP PHASE1:Hg19::chr12:120687798..120687841,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5829|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9718|TSSclassifier=W|UniProt=P49023|association_with_transcript=115bp_to_uc001txx.2_5end|coexpression_cluster_id=C3244|description=CAGE_peak_11_at_PXN_5end|id=chr12:120687798..120687841,-|ontology_enrichment_celltype=CL:0002139!1.24e-14!24;CL:0000115!6.15e-14!35;CL:0000071!2.37e-10!18;CL:0002546!2.37e-10!18;CL:0002078!4.71e-10!44;CL:0000213!3.52e-09!57;CL:0000215!3.52e-09!57|ontology_enrichment_celltype_v019=CL:0000115;9.66e-16;36!CL:0002139;1.39e-14;24!CL:0000071;7.94e-11;18!CL:0002078;6.26e-09;45!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:0002188;6.49e-07;5!CL:0002577;8.34e-07;3|ontology_enrichment_celltype_v019_2=CL:0000115,1.67e-18,36;CL:0002078,6.18e-15,45;CL:0002139,1.01e-14,24;CL:0000071,5.93e-11,18;CL:0002546,5.93e-11,18;CL:0000213,4.17e-10,58;CL:0000215,4.17e-10,58;CL:0002188,6.65e-07,5;CL:0002577,8.26e-07,3|ontology_enrichment_development_v019=CL:0002546;7.94e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.55e-39!115;UBERON:0004111!8.22e-16!241;UBERON:0001049!6.91e-13!57;UBERON:0005068!6.91e-13!57;UBERON:0006241!6.91e-13!57;UBERON:0007135!6.91e-13!57;UBERON:0000025!7.88e-13!194;UBERON:0000477!6.39e-12!286;UBERON:0003075!1.14e-10!86;UBERON:0007284!1.14e-10!86;UBERON:0003080!2.22e-10!42;UBERON:0001986!2.37e-10!18;UBERON:0004638!2.37e-10!18;UBERON:0004852!2.37e-10!18;UBERON:0002780!1.01e-09!41;UBERON:0001890!1.01e-09!41;UBERON:0006240!1.01e-09!41;UBERON:0002616!1.29e-09!59;UBERON:0002346!1.55e-09!90;UBERON:0000955!4.10e-09!69;UBERON:0006238!4.10e-09!69;UBERON:0000487!1.92e-08!22;UBERON:0001017!3.62e-08!82;UBERON:0000064!3.70e-08!219;UBERON:0002020!6.25e-08!34;UBERON:0003528!6.25e-08!34;UBERON:0000483!7.20e-08!309;UBERON:0005743!7.36e-08!86;UBERON:0000119!8.96e-08!312;UBERON:0001893!1.79e-07!34;UBERON:0002791!3.76e-07!33;UBERON:0002308!7.24e-07!9;UBERON:0000125!7.24e-07!9;UBERON:0003124!7.97e-07!7;UBERON:0006914!9.31e-07!25|ontology_enrichment_uberon_v019=UBERON:0004638;7.94e-11;18!UBERON:0001986;7.94e-11;18!UBERON:0004852;7.94e-11;18!UBERON:0007023;2.77e-09;114!UBERON:0001987;1.98e-08;4!UBERON:0000487;2.48e-08;22!UBERON:0006914;5.30e-07;25!UBERON:0007100;7.00e-07;25!UBERON:0004151;8.03e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-34,114;UBERON:0004111,4.74e-12,240;UBERON:0004638,5.93e-11,18;UBERON:0001986,5.93e-11,18;UBERON:0004852,5.93e-11,18;UBERON:0000025,1.27e-10,192;UBERON:0004872,7.16e-10,83;UBERON:0003124,1.26e-09,7;UBERON:0003103,1.83e-09,68;UBERON:0000055,2.92e-09,68;UBERON:0001987,1.76e-08,4;UBERON:0004340,1.76e-08,4;UBERON:0000487,1.97e-08,22;UBERON:0001009,4.48e-08,112;UBERON:0005631,2.11e-07,14;UBERON:0000158,2.11e-07,14;UBERON:0002049,2.97e-07,78;UBERON:0007798,2.97e-07,78;UBERON:0004876,3.42e-07,11;UBERON:0007100,3.85e-07,27;UBERON:0006914,4.37e-07,25;UBERON:0000080,6.13e-07,9;UBERON:0002120,6.13e-07,9;UBERON:0004875,6.13e-07,9;UBERON:0005721,6.13e-07,9;UBERON:0005754,6.13e-07,9;UBERON:0007297,6.13e-07,9;UBERON:0004151,8.42e-07,3;UBERON:0001049,8.89e-07,56;UBERON:0005068,8.89e-07,56;UBERON:0006241,8.89e-07,56;UBERON:0007135,8.89e-07,56|phase1_expression=0,0,0.422863212287913,1.0007329835313,0,0,0,1.26343974685366,0,0.491467873003018,0,2.40285509343189,2.63766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,1.15076305659177,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0,0.589405839739707,0.364295288292542,0,0,0,0.26591592103773,0,0,0,1.59009925893364,0,1.38856200643038,1.13061588384802,1.67799774483962,0.825354125820202,1.25396979922086,10.0782536076038,16.009481820902,9.70689777017544,2.01414658554573,19.7670747486813,0.976248230192678,7.72092468726324,0.81014194788176,1.69669483739752,2.69435247151404,2.59006405111641,0,2.84779697870439,0.732806975721629,2.63560834872127,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0.936480230490962,0.570471821544449,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,1.82032272387605,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,8.11971000087113,2.80483547606892,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.866198686566443,1.38895653772983,0.570762456703795,0,0,0,1.17002132569619,0.594524649154913,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,3.57656445851882,1.690605505112,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9718 | |||
|TSSclassifier=W | |||
|UniProt=P49023 | |||
|association_with_transcript=115bp_to_uc001txx.2_5end | |||
|coexpression_cluster_id=C3244 | |||
|description=CAGE_peak_11_at_PXN_5end | |||
|id=chr12:120687798..120687841,- | |||
|ontology_enrichment_celltype=CL:0002139!1.24e-14!24;CL:0000115!6.15e-14!35;CL:0000071!2.37e-10!18;CL:0002546!2.37e-10!18;CL:0002078!4.71e-10!44;CL:0000213!3.52e-09!57;CL:0000215!3.52e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;9.66e-16;36!CL:0002139;1.39e-14;24!CL:0000071;7.94e-11;18!CL:0002078;6.26e-09;45!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:0002188;6.49e-07;5!CL:0002577;8.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.67e-18,36;CL:0002078,6.18e-15,45;CL:0002139,1.01e-14,24;CL:0000071,5.93e-11,18;CL:0002546,5.93e-11,18;CL:0000213,4.17e-10,58;CL:0000215,4.17e-10,58;CL:0002188,6.65e-07,5;CL:0002577,8.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;7.94e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-39!115;UBERON:0004111!8.22e-16!241;UBERON:0001049!6.91e-13!57;UBERON:0005068!6.91e-13!57;UBERON:0006241!6.91e-13!57;UBERON:0007135!6.91e-13!57;UBERON:0000025!7.88e-13!194;UBERON:0000477!6.39e-12!286;UBERON:0003075!1.14e-10!86;UBERON:0007284!1.14e-10!86;UBERON:0003080!2.22e-10!42;UBERON:0001986!2.37e-10!18;UBERON:0004638!2.37e-10!18;UBERON:0004852!2.37e-10!18;UBERON:0002780!1.01e-09!41;UBERON:0001890!1.01e-09!41;UBERON:0006240!1.01e-09!41;UBERON:0002616!1.29e-09!59;UBERON:0002346!1.55e-09!90;UBERON:0000955!4.10e-09!69;UBERON:0006238!4.10e-09!69;UBERON:0000487!1.92e-08!22;UBERON:0001017!3.62e-08!82;UBERON:0000064!3.70e-08!219;UBERON:0002020!6.25e-08!34;UBERON:0003528!6.25e-08!34;UBERON:0000483!7.20e-08!309;UBERON:0005743!7.36e-08!86;UBERON:0000119!8.96e-08!312;UBERON:0001893!1.79e-07!34;UBERON:0002791!3.76e-07!33;UBERON:0002308!7.24e-07!9;UBERON:0000125!7.24e-07!9;UBERON:0003124!7.97e-07!7;UBERON:0006914!9.31e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.94e-11;18!UBERON:0001986;7.94e-11;18!UBERON:0004852;7.94e-11;18!UBERON:0007023;2.77e-09;114!UBERON:0001987;1.98e-08;4!UBERON:0000487;2.48e-08;22!UBERON:0006914;5.30e-07;25!UBERON:0007100;7.00e-07;25!UBERON:0004151;8.03e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-34,114;UBERON:0004111,4.74e-12,240;UBERON:0004638,5.93e-11,18;UBERON:0001986,5.93e-11,18;UBERON:0004852,5.93e-11,18;UBERON:0000025,1.27e-10,192;UBERON:0004872,7.16e-10,83;UBERON:0003124,1.26e-09,7;UBERON:0003103,1.83e-09,68;UBERON:0000055,2.92e-09,68;UBERON:0001987,1.76e-08,4;UBERON:0004340,1.76e-08,4;UBERON:0000487,1.97e-08,22;UBERON:0001009,4.48e-08,112;UBERON:0005631,2.11e-07,14;UBERON:0000158,2.11e-07,14;UBERON:0002049,2.97e-07,78;UBERON:0007798,2.97e-07,78;UBERON:0004876,3.42e-07,11;UBERON:0007100,3.85e-07,27;UBERON:0006914,4.37e-07,25;UBERON:0000080,6.13e-07,9;UBERON:0002120,6.13e-07,9;UBERON:0004875,6.13e-07,9;UBERON:0005721,6.13e-07,9;UBERON:0005754,6.13e-07,9;UBERON:0007297,6.13e-07,9;UBERON:0004151,8.42e-07,3;UBERON:0001049,8.89e-07,56;UBERON:0005068,8.89e-07,56;UBERON:0006241,8.89e-07,56;UBERON:0007135,8.89e-07,56 | |||
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| |||
|short_description=p11@PXN | |||
}} |
Revision as of 21:15, 10 September 2013
Short description: | p11@PXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PXN_5end |
Coexpression cluster: | C3244_heart_lung_giant_Endothelial_Renal_Placental_skeletal |
Association with transcript: | 115bp_to_uc001txx.2_5end |
EntrezGene: | PXN |
HGNC: | 9718 |
UniProt: | P49023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.67e-18 | 36 |
meso-epithelial cell | 6.18e-15 | 45 |
endothelial cell of vascular tree | 1.01e-14 | 24 |
blood vessel endothelial cell | 5.93e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.93e-11 | 18 |
lining cell | 4.17e-10 | 58 |
barrier cell | 4.17e-10 | 58 |
glomerular endothelial cell | 6.65e-07 | 5 |
placental epithelial cell | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-34 | 114 |
anatomical conduit | 4.74e-12 | 240 |
blood vessel endothelium | 5.93e-11 | 18 |
endothelium | 5.93e-11 | 18 |
cardiovascular system endothelium | 5.93e-11 | 18 |
tube | 1.27e-10 | 192 |
splanchnic layer of lateral plate mesoderm | 7.16e-10 | 83 |
chorion | 1.26e-09 | 7 |
compound organ | 1.83e-09 | 68 |
vessel | 2.92e-09 | 68 |
placenta | 1.76e-08 | 4 |
allantois | 1.76e-08 | 4 |
simple squamous epithelium | 1.97e-08 | 22 |
circulatory system | 4.48e-08 | 112 |
extraembryonic membrane | 2.11e-07 | 14 |
membranous layer | 2.11e-07 | 14 |
vasculature | 2.97e-07 | 78 |
vascular system | 2.97e-07 | 78 |
urogenital ridge | 3.42e-07 | 11 |
primary circulatory organ | 3.85e-07 | 27 |
squamous epithelium | 4.37e-07 | 25 |
mesonephros | 6.13e-07 | 9 |
pronephros | 6.13e-07 | 9 |
nephrogenic cord | 6.13e-07 | 9 |
pronephric mesoderm | 6.13e-07 | 9 |
rostral part of nephrogenic cord | 6.13e-07 | 9 |
presumptive pronephric mesoderm | 6.13e-07 | 9 |
cardiac chamber | 8.42e-07 | 3 |
neural tube | 8.89e-07 | 56 |
neural rod | 8.89e-07 | 56 |
future spinal cord | 8.89e-07 | 56 |
neural keel | 8.89e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.