FFCP PHASE1:Hg19::chr12:10854646..10854658,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8531|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2428|TSSclassifier=N|UniProt=|association_with_transcript=311bp_to_ENST00000366290_5end|coexpression_cluster_id=C14|description=CAGE_peak_24_at_CSDA_5end|id=chr12:10854646..10854658,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;1.87e-07;2!CL:0000558;1.87e-07;2|ontology_enrichment_celltype_v019_2=CL:0000764,2.25e-07,2;CL:0000765,2.25e-07,2;CL:0000050,2.25e-07,2;CL:0000038,2.25e-07,2;CL:0000558,2.25e-07,2;CL:0000547,2.25e-07,2;CL:0000549,2.25e-07,2;CL:0000550,2.25e-07,2;CL:0000552,2.25e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.63e-09!15;UBERON:0000179!1.63e-09!15;UBERON:0000463!1.63e-09!15|ontology_enrichment_uberon_v019=UBERON:0000178;7.83e-53;15!UBERON:0000179;7.83e-53;15!UBERON:0000463;7.83e-53;15!UBERON:0005090;1.85e-25;2!UBERON:0001630;1.85e-25;2!UBERON:0002390;4.35e-23;32!UBERON:0001389;1.25e-13;1!UBERON:0000026;1.25e-13;1!UBERON:0008784;1.25e-13;1!UBERON:0006058;1.25e-13;1!UBERON:0002426;1.25e-13;1!UBERON:0003831;1.25e-13;1!UBERON:0003898;1.25e-13;1!UBERON:0004830;1.25e-13;1!UBERON:0003663;1.25e-13;1!UBERON:0004256;1.25e-13;1!UBERON:0004708;1.25e-13;1!UBERON:0002101;1.25e-13;1!UBERON:0004709;1.25e-13;1!UBERON:0003830;1.25e-13;1!UBERON:0005175;1.25e-13;1!UBERON:0002529;1.25e-13;1!UBERON:0010538;1.25e-13;1!UBERON:0003661;1.25e-13;1!UBERON:0010890;1.25e-13;1!UBERON:0002471;1.25e-13;1!UBERON:0001774;1.25e-13;1!UBERON:0001383;1.25e-13;1!UBERON:0010758;1.25e-13;1!UBERON:0010707;1.25e-13;1!UBERON:0001103;1.25e-13;1!UBERON:0000978;1.25e-13;1!UBERON:0002103;1.25e-13;1!UBERON:0001665;1.25e-13;1!UBERON:0003823;1.25e-13;1!UBERON:0000154;1.25e-13;1!UBERON:0010709;1.25e-13;1!UBERON:0002193;3.26e-13;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.41e-53,15;UBERON:0000179,6.41e-53,15;UBERON:0000463,6.41e-53,15;UBERON:0005090,9.87e-26,2;UBERON:0001630,9.87e-26,2;UBERON:0005418,7.55e-14,1;UBERON:0001389,7.55e-14,1;UBERON:0000026,7.55e-14,1;UBERON:0008784,7.55e-14,1;UBERON:0006058,7.55e-14,1;UBERON:0003663,7.55e-14,1;UBERON:0004256,7.55e-14,1;UBERON:0004708,7.55e-14,1;UBERON:0002101,7.55e-14,1;UBERON:0004709,7.55e-14,1;UBERON:0002529,7.55e-14,1;UBERON:0010538,7.55e-14,1;UBERON:0003661,7.55e-14,1;UBERON:0010890,7.55e-14,1;UBERON:0002471,7.55e-14,1;UBERON:0001383,7.55e-14,1;UBERON:0004357,7.55e-14,1;UBERON:0004347,7.55e-14,1;UBERON:0005420,7.55e-14,1;UBERON:0005732,7.55e-14,1;UBERON:0010758,7.55e-14,1;UBERON:0010707,7.55e-14,1;UBERON:0000978,7.55e-14,1;UBERON:0002103,7.55e-14,1;UBERON:0001665,7.55e-14,1;UBERON:0003823,7.55e-14,1;UBERON:0000154,7.55e-14,1;UBERON:0010709,7.55e-14,1;UBERON:0005733,7.55e-14,1;UBERON:0005730,7.55e-14,1;UBERON:0002426,1.10e-13,1;UBERON:0003831,1.10e-13,1;UBERON:0003898,1.10e-13,1;UBERON:0004830,1.10e-13,1;UBERON:0003830,1.10e-13,1;UBERON:0005175,1.10e-13,1;UBERON:0001774,1.10e-13,1;UBERON:0001103,1.10e-13,1;UBERON:0010084,1.10e-13,1;UBERON:0007023,5.87e-12,114;UBERON:0002390,2.83e-09,98;UBERON:0003061,2.83e-09,98;UBERON:0002193,2.52e-08,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,1.0429658368404,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.813795071099207,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,1.09629938322967,0.522870902049801,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8531 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=311bp_to_ENST00000366290_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_24_at_CSDA_5end | |||
|id=chr12:10854646..10854658,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.87e-07;2!CL:0000558;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.25e-07,2;CL:0000765,2.25e-07,2;CL:0000050,2.25e-07,2;CL:0000038,2.25e-07,2;CL:0000558,2.25e-07,2;CL:0000547,2.25e-07,2;CL:0000549,2.25e-07,2;CL:0000550,2.25e-07,2;CL:0000552,2.25e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.63e-09!15;UBERON:0000179!1.63e-09!15;UBERON:0000463!1.63e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.83e-53;15!UBERON:0000179;7.83e-53;15!UBERON:0000463;7.83e-53;15!UBERON:0005090;1.85e-25;2!UBERON:0001630;1.85e-25;2!UBERON:0002390;4.35e-23;32!UBERON:0001389;1.25e-13;1!UBERON:0000026;1.25e-13;1!UBERON:0008784;1.25e-13;1!UBERON:0006058;1.25e-13;1!UBERON:0002426;1.25e-13;1!UBERON:0003831;1.25e-13;1!UBERON:0003898;1.25e-13;1!UBERON:0004830;1.25e-13;1!UBERON:0003663;1.25e-13;1!UBERON:0004256;1.25e-13;1!UBERON:0004708;1.25e-13;1!UBERON:0002101;1.25e-13;1!UBERON:0004709;1.25e-13;1!UBERON:0003830;1.25e-13;1!UBERON:0005175;1.25e-13;1!UBERON:0002529;1.25e-13;1!UBERON:0010538;1.25e-13;1!UBERON:0003661;1.25e-13;1!UBERON:0010890;1.25e-13;1!UBERON:0002471;1.25e-13;1!UBERON:0001774;1.25e-13;1!UBERON:0001383;1.25e-13;1!UBERON:0010758;1.25e-13;1!UBERON:0010707;1.25e-13;1!UBERON:0001103;1.25e-13;1!UBERON:0000978;1.25e-13;1!UBERON:0002103;1.25e-13;1!UBERON:0001665;1.25e-13;1!UBERON:0003823;1.25e-13;1!UBERON:0000154;1.25e-13;1!UBERON:0010709;1.25e-13;1!UBERON:0002193;3.26e-13;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.41e-53,15;UBERON:0000179,6.41e-53,15;UBERON:0000463,6.41e-53,15;UBERON:0005090,9.87e-26,2;UBERON:0001630,9.87e-26,2;UBERON:0005418,7.55e-14,1;UBERON:0001389,7.55e-14,1;UBERON:0000026,7.55e-14,1;UBERON:0008784,7.55e-14,1;UBERON:0006058,7.55e-14,1;UBERON:0003663,7.55e-14,1;UBERON:0004256,7.55e-14,1;UBERON:0004708,7.55e-14,1;UBERON:0002101,7.55e-14,1;UBERON:0004709,7.55e-14,1;UBERON:0002529,7.55e-14,1;UBERON:0010538,7.55e-14,1;UBERON:0003661,7.55e-14,1;UBERON:0010890,7.55e-14,1;UBERON:0002471,7.55e-14,1;UBERON:0001383,7.55e-14,1;UBERON:0004357,7.55e-14,1;UBERON:0004347,7.55e-14,1;UBERON:0005420,7.55e-14,1;UBERON:0005732,7.55e-14,1;UBERON:0010758,7.55e-14,1;UBERON:0010707,7.55e-14,1;UBERON:0000978,7.55e-14,1;UBERON:0002103,7.55e-14,1;UBERON:0001665,7.55e-14,1;UBERON:0003823,7.55e-14,1;UBERON:0000154,7.55e-14,1;UBERON:0010709,7.55e-14,1;UBERON:0005733,7.55e-14,1;UBERON:0005730,7.55e-14,1;UBERON:0002426,1.10e-13,1;UBERON:0003831,1.10e-13,1;UBERON:0003898,1.10e-13,1;UBERON:0004830,1.10e-13,1;UBERON:0003830,1.10e-13,1;UBERON:0005175,1.10e-13,1;UBERON:0001774,1.10e-13,1;UBERON:0001103,1.10e-13,1;UBERON:0010084,1.10e-13,1;UBERON:0007023,5.87e-12,114;UBERON:0002390,2.83e-09,98;UBERON:0003061,2.83e-09,98;UBERON:0002193,2.52e-08,108 | |||
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|short_description=p24@CSDA | |||
}} |
Revision as of 20:41, 10 September 2013
Short description: | p24@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_CSDA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 311bp_to_ENST00000366290_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.25e-07 | 2 |
erythroblast | 2.25e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.25e-07 | 2 |
erythroid progenitor cell | 2.25e-07 | 2 |
reticulocyte | 2.25e-07 | 2 |
proerythroblast | 2.25e-07 | 2 |
basophilic erythroblast | 2.25e-07 | 2 |
polychromatophilic erythroblast | 2.25e-07 | 2 |
orthochromatic erythroblast | 2.25e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.