FFCP PHASE1:Hg19::chr11:17297848..17297868,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4925|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8044|TSSclassifier=W|UniProt=|association_with_transcript=-409bp_to_ENST00000525637_5end|description=CAGE_peak_9_at_NUCB2_5end|id=chr11:17297848..17297868,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;6.55e-10;2!CL:0000558;6.55e-10;2!CL:0000763;9.43e-10;100|ontology_enrichment_celltype_v019_2=CL:0000763,2.57e-23,108;CL:0000049,2.57e-23,108;CL:0000037,5.28e-22,168;CL:0000988,1.56e-20,177;CL:0002032,8.72e-20,161;CL:0000837,8.72e-20,161;CL:0000764,5.57e-10,2;CL:0000765,5.57e-10,2;CL:0000050,5.57e-10,2;CL:0000038,5.57e-10,2;CL:0000558,5.57e-10,2;CL:0000547,5.57e-10,2;CL:0000549,5.57e-10,2;CL:0000550,5.57e-10,2;CL:0000552,5.57e-10,2;CL:0000134,3.14e-08,354;CL:0002320,6.26e-08,361;CL:0000034,4.45e-07,441;CL:0000219,7.04e-07,386|ontology_enrichment_development_v019=CL:0000049;5.95e-08;108|ontology_enrichment_disease=DOID:2531!1.86e-28!51;DOID:0060083!1.86e-28!51;DOID:1240!2.17e-27!39;DOID:8692!1.81e-21!31;DOID:0050686!7.63e-15!137;DOID:14566!2.60e-14!239;DOID:162!1.02e-13!235|ontology_enrichment_disease_v019=DOID:8692;1.03e-64;31!DOID:1240;6.72e-58;39!DOID:2531;1.80e-39;51!DOID:0060083;1.80e-39;51|ontology_enrichment_disease_v019_2=DOID:1240,7.47e-77,39;DOID:8692,9.50e-69,31;DOID:2531,2.54e-62,51;DOID:0060083,2.54e-62,51;DOID:0050686,4.10e-19,137;DOID:162,1.47e-09,235;DOID:14566,3.12e-09,239|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002370;6.55e-10;2!UBERON:0005058;6.55e-10;2!UBERON:0009113;6.55e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.48e-11,4;UBERON:0005058,4.48e-11,4;UBERON:0009113,4.48e-11,4;UBERON:0003295,4.48e-11,4;UBERON:0005562,4.48e-11,4;UBERON:0002384,2.94e-08,371;UBERON:0003351,1.57e-07,6|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.492603536699674,0.0787107813136792,0,0,0,0,0,0,0.852139206383318,0.568676929949686,6.75281010470149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,2.24203425192614,4.47752944117631,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.493313713811028,0.276350017785848,0.579606171470105,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0,0,1.5905718941022,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.327447688744282,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0.18611685633159,0.506328996723799,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,0,13.2438929824395,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,5.41929561685538,0.880484340132261,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0.434343920002738,0,0,9.8634926714304,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,0.561320188866147,0.128139149255701,0,0,0,0.462629081407967,0,0.0821271560138091,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,2.41185864310528,1.8300481571743,0,0,0,0.206082023295445,0.27470839445503,0.82509499920588,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.721346064882224,5.19335456443423,7.49303481825465,2.79411120005943,6.51118258450047,0,0.324621940274555,3.93116049358842,3.19528550646469,13.787830828026,5.01268954180134,0.677167111206413,5.13881840331838,8.67738740921505,4.68430861459359,5.49608551609224,7.06653757909453,9.39439653148147,7.17451309361207,6.44780714826733,2.22724939116194,1.23087398947712,1.08182271390393,3.66379164797602,0,0,0,0,0.111443384277478,0.568272293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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8044 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-409bp_to_ENST00000525637_5end | |||
|description=CAGE_peak_9_at_NUCB2_5end | |||
|id=chr11:17297848..17297868,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;6.55e-10;2!CL:0000558;6.55e-10;2!CL:0000763;9.43e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.57e-23,108;CL:0000049,2.57e-23,108;CL:0000037,5.28e-22,168;CL:0000988,1.56e-20,177;CL:0002032,8.72e-20,161;CL:0000837,8.72e-20,161;CL:0000764,5.57e-10,2;CL:0000765,5.57e-10,2;CL:0000050,5.57e-10,2;CL:0000038,5.57e-10,2;CL:0000558,5.57e-10,2;CL:0000547,5.57e-10,2;CL:0000549,5.57e-10,2;CL:0000550,5.57e-10,2;CL:0000552,5.57e-10,2;CL:0000134,3.14e-08,354;CL:0002320,6.26e-08,361;CL:0000034,4.45e-07,441;CL:0000219,7.04e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;5.95e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.86e-28!51;DOID:0060083!1.86e-28!51;DOID:1240!2.17e-27!39;DOID:8692!1.81e-21!31;DOID:0050686!7.63e-15!137;DOID:14566!2.60e-14!239;DOID:162!1.02e-13!235 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.03e-64;31!DOID:1240;6.72e-58;39!DOID:2531;1.80e-39;51!DOID:0060083;1.80e-39;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.47e-77,39;DOID:8692,9.50e-69,31;DOID:2531,2.54e-62,51;DOID:0060083,2.54e-62,51;DOID:0050686,4.10e-19,137;DOID:162,1.47e-09,235;DOID:14566,3.12e-09,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.55e-10;2!UBERON:0005058;6.55e-10;2!UBERON:0009113;6.55e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.48e-11,4;UBERON:0005058,4.48e-11,4;UBERON:0009113,4.48e-11,4;UBERON:0003295,4.48e-11,4;UBERON:0005562,4.48e-11,4;UBERON:0002384,2.94e-08,371;UBERON:0003351,1.57e-07,6 | |||
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| |||
|short_description=p9@NUCB2 | |||
}} |
Revision as of 16:55, 10 September 2013
Short description: | p9@NUCB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_NUCB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -409bp_to_ENST00000525637_5end |
EntrezGene: | NUCB2 |
HGNC: | 8044 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.57e-23 | 108 |
common myeloid progenitor | 2.57e-23 | 108 |
hematopoietic stem cell | 5.28e-22 | 168 |
hematopoietic cell | 1.56e-20 | 177 |
hematopoietic oligopotent progenitor cell | 8.72e-20 | 161 |
hematopoietic multipotent progenitor cell | 8.72e-20 | 161 |
erythroid lineage cell | 5.57e-10 | 2 |
erythroblast | 5.57e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 5.57e-10 | 2 |
erythroid progenitor cell | 5.57e-10 | 2 |
reticulocyte | 5.57e-10 | 2 |
proerythroblast | 5.57e-10 | 2 |
basophilic erythroblast | 5.57e-10 | 2 |
polychromatophilic erythroblast | 5.57e-10 | 2 |
orthochromatic erythroblast | 5.57e-10 | 2 |
mesenchymal cell | 3.14e-08 | 354 |
connective tissue cell | 6.26e-08 | 361 |
stem cell | 4.45e-07 | 441 |
motile cell | 7.04e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.48e-11 | 4 |
hemolymphoid system gland | 4.48e-11 | 4 |
thymic region | 4.48e-11 | 4 |
pharyngeal gland | 4.48e-11 | 4 |
thymus primordium | 4.48e-11 | 4 |
connective tissue | 2.94e-08 | 371 |
pharyngeal epithelium | 1.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.47e-77 | 39 |
myeloid leukemia | 9.50e-69 | 31 |
hematologic cancer | 2.54e-62 | 51 |
immune system cancer | 2.54e-62 | 51 |
organ system cancer | 4.10e-19 | 137 |
cancer | 1.47e-09 | 235 |
disease of cellular proliferation | 3.12e-09 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.