FFCP PHASE1:Hg19::chr3:55515438..55515465,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.11e-22!180;CL:0000057!9.23e-16!75;CL:0002620!2.44e-10!23;CL:0000680!1.89e-08!57;CL:0000056!1.89e-08!57;CL:0000355!1.89e-08!57;CL:0000187!1.96e-07!54;CL:0000183!5.58e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.11e-22!180;CL:0000057!9.23e-16!75;CL:0002620!2.44e-10!23;CL:0000680!1.89e-08!57;CL:0000056!1.89e-08!57;CL:0000355!1.89e-08!57;CL:0000187!1.96e-07!54;CL:0000183!5.58e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.71e-13;23!CL:0000134;9.11e-13;55!CL:0000349;4.61e-12;19!CL:0000723;7.62e-12;61!CL:0000048;8.94e-11;58!CL:0000034;4.53e-09;69!CL:0000057;1.00e-07;73!CL:0002320;6.68e-07;188 | |ontology_enrichment_celltype_v019=CL:0002620;4.71e-13;23!CL:0000134;9.11e-13;55!CL:0000349;4.61e-12;19!CL:0000723;7.62e-12;61!CL:0000048;8.94e-11;58!CL:0000034;4.53e-09;69!CL:0000057;1.00e-07;73!CL:0002320;6.68e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.53e-16,76;CL:0002620,5.40e-13,23;CL:0000349,4.58e-12,19;CL:0000048,1.24e-08,427;CL:0000680,2.62e-08,58;CL:0000056,2.62e-08,58;CL:0000355,2.62e-08,58;CL:0000723,5.16e-08,433;CL:0000034,3.10e-07,441;CL:0000187,4.26e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;7.49e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;7.49e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,7.99e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.62e-14!365;UBERON:0000914!2.24e-13!83;UBERON:0002329!2.24e-13!83;UBERON:0003077!2.24e-13!83;UBERON:0003059!2.24e-13!83;UBERON:0007282!2.24e-13!83;UBERON:0009618!2.24e-13!83;UBERON:0007285!2.24e-13!83;UBERON:0003102!2.56e-12!95;UBERON:0000481!1.09e-10!347;UBERON:0000486!1.97e-10!82;UBERON:0002199!1.51e-09!45;UBERON:0002416!1.51e-09!45;UBERON:0005631!1.85e-09!14;UBERON:0000158!1.85e-09!14;UBERON:0004290!1.90e-09!70;UBERON:0005256!2.03e-09!143;UBERON:0000064!1.11e-08!219;UBERON:0002097!3.40e-08!40;UBERON:0000478!2.70e-07!24;UBERON:0001444!2.91e-07!48;UBERON:0003104!4.30e-07!238;UBERON:0009142!4.30e-07!238;UBERON:0004871!5.24e-07!8;UBERON:0000468!5.32e-07!659;UBERON:0000305!6.18e-07!7;UBERON:0001134!6.25e-07!61;UBERON:0002036!6.25e-07!61;UBERON:0003082!6.25e-07!61;UBERON:0001737!8.91e-07!9 | |ontology_enrichment_uberon=UBERON:0000475!1.62e-14!365;UBERON:0000914!2.24e-13!83;UBERON:0002329!2.24e-13!83;UBERON:0003077!2.24e-13!83;UBERON:0003059!2.24e-13!83;UBERON:0007282!2.24e-13!83;UBERON:0009618!2.24e-13!83;UBERON:0007285!2.24e-13!83;UBERON:0003102!2.56e-12!95;UBERON:0000481!1.09e-10!347;UBERON:0000486!1.97e-10!82;UBERON:0002199!1.51e-09!45;UBERON:0002416!1.51e-09!45;UBERON:0005631!1.85e-09!14;UBERON:0000158!1.85e-09!14;UBERON:0004290!1.90e-09!70;UBERON:0005256!2.03e-09!143;UBERON:0000064!1.11e-08!219;UBERON:0002097!3.40e-08!40;UBERON:0000478!2.70e-07!24;UBERON:0001444!2.91e-07!48;UBERON:0003104!4.30e-07!238;UBERON:0009142!4.30e-07!238;UBERON:0004871!5.24e-07!8;UBERON:0000468!5.32e-07!659;UBERON:0000305!6.18e-07!7;UBERON:0001134!6.25e-07!61;UBERON:0002036!6.25e-07!61;UBERON:0003082!6.25e-07!61;UBERON:0001737!8.91e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.73e-09;24!UBERON:0005631;2.84e-09;10!UBERON:0000158;2.84e-09;10!UBERON:0000305;8.08e-09;7!UBERON:0002097;1.04e-08;41!UBERON:0001737;1.46e-08;9!UBERON:0001557;1.46e-08;9!UBERON:0003102;1.45e-07;50!UBERON:0002199;1.54e-07;46!UBERON:0002416;1.54e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0000478;2.73e-09;24!UBERON:0005631;2.84e-09;10!UBERON:0000158;2.84e-09;10!UBERON:0000305;8.08e-09;7!UBERON:0002097;1.04e-08;41!UBERON:0001737;1.46e-08;9!UBERON:0001557;1.46e-08;9!UBERON:0003102;1.45e-07;50!UBERON:0002199;1.54e-07;46!UBERON:0002416;1.54e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.67e-13,99;UBERON:0002199,1.09e-12,46;UBERON:0002416,1.09e-12,46;UBERON:0005631,1.42e-12,14;UBERON:0000158,1.42e-12,14;UBERON:0002097,2.72e-11,41;UBERON:0007524,3.70e-10,73;UBERON:0002329,6.21e-10,71;UBERON:0003059,6.21e-10,71;UBERON:0007282,6.21e-10,71;UBERON:0004290,6.21e-10,71;UBERON:0009618,6.21e-10,71;UBERON:0003077,1.26e-09,72;UBERON:0007285,1.26e-09,72;UBERON:0000478,2.57e-09,24;UBERON:0000486,2.95e-09,83;UBERON:0007503,4.69e-09,78;UBERON:0004871,6.48e-09,8;UBERON:0000305,8.09e-09,7;UBERON:0001737,1.32e-08,9;UBERON:0004923,2.45e-07,66;UBERON:0001134,3.73e-07,62;UBERON:0002036,3.73e-07,62;UBERON:0003082,3.73e-07,62 | |||
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| ||
|short_description=p4@WNT5A | |short_description=p4@WNT5A | ||
}} | }} |
Revision as of 04:13, 20 November 2012
Short description: | p4@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_WNT5A_5end |
Coexpression cluster: | C1516_amniotic_Fibroblast_Hair_Amniotic_Placental_Chondrocyte_liposarcoma |
Association with transcript: | -17bp_to_ENST00000497027_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.53e-16 | 76 |
skin fibroblast | 5.40e-13 | 23 |
extraembryonic cell | 4.58e-12 | 19 |
multi fate stem cell | 1.24e-08 | 427 |
muscle precursor cell | 2.62e-08 | 58 |
myoblast | 2.62e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.62e-08 | 58 |
somatic stem cell | 5.16e-08 | 433 |
stem cell | 3.10e-07 | 441 |
muscle cell | 4.26e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.67e-13 | 99 |
integument | 1.09e-12 | 46 |
integumental system | 1.09e-12 | 46 |
extraembryonic membrane | 1.42e-12 | 14 |
membranous layer | 1.42e-12 | 14 |
skin of body | 2.72e-11 | 41 |
dense mesenchyme tissue | 3.70e-10 | 73 |
somite | 6.21e-10 | 71 |
presomitic mesoderm | 6.21e-10 | 71 |
presumptive segmental plate | 6.21e-10 | 71 |
dermomyotome | 6.21e-10 | 71 |
trunk paraxial mesoderm | 6.21e-10 | 71 |
paraxial mesoderm | 1.26e-09 | 72 |
presumptive paraxial mesoderm | 1.26e-09 | 72 |
extraembryonic structure | 2.57e-09 | 24 |
multilaminar epithelium | 2.95e-09 | 83 |
epithelial vesicle | 4.69e-09 | 78 |
somatic layer of lateral plate mesoderm | 6.48e-09 | 8 |
amnion | 8.09e-09 | 7 |
larynx | 1.32e-08 | 9 |
organ component layer | 2.45e-07 | 66 |
skeletal muscle tissue | 3.73e-07 | 62 |
striated muscle tissue | 3.73e-07 | 62 |
myotome | 3.73e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.99e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.