FFCP PHASE1:Hg19::chr6:2245779..2245782,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;2.36e-09;86!UBERON:0009497;5.75e-07;13 | |ontology_enrichment_development_v019=UBERON:0006595;2.36e-09;86!UBERON:0009497;5.75e-07;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;4.57e-09;2 | |ontology_enrichment_disease_v019=DOID:3493;4.57e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,4.97e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!8.20e-07!155;UBERON:0001555!8.20e-07!155;UBERON:0007026!8.20e-07!155;UBERON:0004921!9.34e-07!129;UBERON:0004185!9.34e-07!129 | |ontology_enrichment_uberon=UBERON:0001007!8.20e-07!155;UBERON:0001555!8.20e-07!155;UBERON:0007026!8.20e-07!155;UBERON:0004921!9.34e-07!129;UBERON:0004185!9.34e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.02e-17;33!UBERON:0001041;1.62e-12;14!UBERON:0005409;7.11e-12;22!UBERON:0001829;1.73e-08;2!UBERON:0003127;5.18e-08;2!UBERON:0006562;5.18e-08;2!UBERON:0000945;9.01e-08;5!UBERON:0010039;9.01e-08;5!UBERON:0004905;3.31e-07;8!UBERON:0000982;3.31e-07;8!UBERON:0004770;3.31e-07;8!UBERON:0001555;3.33e-07;54!UBERON:0000160;6.41e-07;17!UBERON:0011135;7.01e-07;5!UBERON:0002216;7.01e-07;5!UBERON:0011134;7.01e-07;5!UBERON:0002209;7.01e-07;5!UBERON:0002213;7.01e-07;5!UBERON:0007844;7.01e-07;5!UBERON:0011138;7.01e-07;5!UBERON:0001130;7.01e-07;5!UBERON:0001066;7.01e-07;5!UBERON:0001468;7.01e-07;5!UBERON:0001155;8.42e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.02e-17;33!UBERON:0001041;1.62e-12;14!UBERON:0005409;7.11e-12;22!UBERON:0001829;1.73e-08;2!UBERON:0003127;5.18e-08;2!UBERON:0006562;5.18e-08;2!UBERON:0000945;9.01e-08;5!UBERON:0010039;9.01e-08;5!UBERON:0004905;3.31e-07;8!UBERON:0000982;3.31e-07;8!UBERON:0004770;3.31e-07;8!UBERON:0001555;3.33e-07;54!UBERON:0000160;6.41e-07;17!UBERON:0011135;7.01e-07;5!UBERON:0002216;7.01e-07;5!UBERON:0011134;7.01e-07;5!UBERON:0002209;7.01e-07;5!UBERON:0002213;7.01e-07;5!UBERON:0007844;7.01e-07;5!UBERON:0011138;7.01e-07;5!UBERON:0001130;7.01e-07;5!UBERON:0001066;7.01e-07;5!UBERON:0001468;7.01e-07;5!UBERON:0001155;8.42e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.71e-13,118;UBERON:0001007,1.35e-10,145;UBERON:0001555,1.35e-10,145;UBERON:0007026,1.35e-10,145;UBERON:0005409,3.08e-10,25;UBERON:0001041,2.56e-09,87;UBERON:0004119,4.82e-09,160;UBERON:0000925,4.82e-09,160;UBERON:0006595,4.82e-09,160;UBERON:0001829,1.34e-08,2;UBERON:0003127,2.91e-08,2;UBERON:0011216,6.32e-08,223;UBERON:0004905,4.07e-07,8;UBERON:0000982,4.07e-07,8;UBERON:0004770,4.07e-07,8;UBERON:0000160,7.60e-07,17;UBERON:0011135,8.58e-07,5;UBERON:0002216,8.58e-07,5;UBERON:0011134,8.58e-07,5;UBERON:0002209,8.58e-07,5;UBERON:0002213,8.58e-07,5;UBERON:0005856,8.58e-07,5;UBERON:0005866,8.58e-07,5;UBERON:0005863,8.58e-07,5;UBERON:0007844,8.58e-07,5;UBERON:0011138,8.58e-07,5;UBERON:0001130,8.58e-07,5;UBERON:0001066,8.58e-07,5;UBERON:0001468,8.58e-07,5 | |||
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| ||
|short_description=p5@GMDS | |short_description=p5@GMDS | ||
}} | }} |
Revision as of 15:33, 19 November 2012
Short description: | p5@GMDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GMDS_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_uc003mtq.2_5end |
EntrezGene: | GMDS |
HGNC: | 4369 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 4.71e-13 | 118 |
digestive system | 1.35e-10 | 145 |
digestive tract | 1.35e-10 | 145 |
primitive gut | 1.35e-10 | 145 |
gastrointestinal system | 3.08e-10 | 25 |
foregut | 2.56e-09 | 87 |
endoderm-derived structure | 4.82e-09 | 160 |
endoderm | 4.82e-09 | 160 |
presumptive endoderm | 4.82e-09 | 160 |
major salivary gland | 1.34e-08 | 2 |
open tracheal system trachea | 2.91e-08 | 2 |
organ system subdivision | 6.32e-08 | 223 |
articulation | 4.07e-07 | 8 |
skeletal joint | 4.07e-07 | 8 |
articular system | 4.07e-07 | 8 |
intestine | 7.60e-07 | 17 |
intervertebral cartilage | 8.58e-07 | 5 |
symphysis | 8.58e-07 | 5 |
nonsynovial joint | 8.58e-07 | 5 |
fibrous joint | 8.58e-07 | 5 |
cartilaginous joint | 8.58e-07 | 5 |
developing mesenchymal condensation | 8.58e-07 | 5 |
pre-cartilage condensation | 8.58e-07 | 5 |
cartilaginous condensation | 8.58e-07 | 5 |
cartilage element | 8.58e-07 | 5 |
post-cranial axial skeletal system | 8.58e-07 | 5 |
vertebral column | 8.58e-07 | 5 |
intervertebral disk | 8.58e-07 | 5 |
intervertebral joint | 8.58e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.97e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.