FFCP PHASE1:Hg19::chr18:21166736..21166756,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000548!1.98e-10!679;CL:0000004!1.98e-10!679;CL:0000255!1.98e-10!679;CL:0000012!7.63e-10!682;CL:0000066!6.25e-09!254;CL:0000063!7.53e-07!578 | |ontology_enrichment_celltype=CL:0000548!1.98e-10!679;CL:0000004!1.98e-10!679;CL:0000255!1.98e-10!679;CL:0000012!7.63e-10!682;CL:0000066!6.25e-09!254;CL:0000063!7.53e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.70e-13;10!CL:1000494;1.70e-13;10!CL:0002681;5.80e-11;12!CL:0002584;5.80e-11;12!CL:1000449;1.52e-10;15!CL:0002368;4.12e-09;13!CL:1000497;4.53e-09;17!CL:0002518;4.53e-09;17!CL:0000239;4.52e-08;3!CL:1000615;4.52e-08;3!CL:0002306;4.52e-08;3!CL:0002567;3.74e-07;3 | |ontology_enrichment_celltype_v019=CL:1000507;1.70e-13;10!CL:1000494;1.70e-13;10!CL:0002681;5.80e-11;12!CL:0002584;5.80e-11;12!CL:1000449;1.52e-10;15!CL:0002368;4.12e-09;13!CL:1000497;4.53e-09;17!CL:0002518;4.53e-09;17!CL:0000239;4.52e-08;3!CL:1000615;4.52e-08;3!CL:0002306;4.52e-08;3!CL:0002567;3.74e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.41e-13,10;CL:1000494,1.41e-13,10;CL:0002681,6.02e-11,12;CL:0002584,6.02e-11,12;CL:1000449,1.16e-10,15;CL:0002368,1.59e-09,13;CL:1000497,3.59e-09,17;CL:0002518,3.59e-09,17;CL:0000239,4.56e-08,3;CL:1000615,4.56e-08,3;CL:0002306,4.56e-08,3;CL:0002567,3.42e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!6.06e-10!511;UBERON:0000468!3.45e-08!659;UBERON:0000467!4.54e-08!625;UBERON:0000480!6.67e-08!626 | |ontology_enrichment_uberon=UBERON:0000062!6.06e-10!511;UBERON:0000468!3.45e-08!659;UBERON:0000467!4.54e-08!625;UBERON:0000480!6.67e-08!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.70e-13;10!UBERON:0009773;1.70e-13;10!UBERON:0001231;1.70e-13;10!UBERON:0004810;1.70e-13;10!UBERON:0001225;5.80e-11;12!UBERON:0008987;5.80e-11;12!UBERON:0006555;1.52e-10;15!UBERON:0004819;1.52e-10;15!UBERON:0001285;1.52e-10;15!UBERON:0007684;1.52e-10;15!UBERON:0001851;1.94e-08;15!UBERON:0000353;1.94e-08;15!UBERON:0006853;4.52e-08;3!UBERON:0007685;4.52e-08;3!UBERON:0004134;4.52e-08;3!UBERON:0002113;3.21e-07;24!UBERON:0011143;3.21e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0004211;1.70e-13;10!UBERON:0009773;1.70e-13;10!UBERON:0001231;1.70e-13;10!UBERON:0004810;1.70e-13;10!UBERON:0001225;5.80e-11;12!UBERON:0008987;5.80e-11;12!UBERON:0006555;1.52e-10;15!UBERON:0004819;1.52e-10;15!UBERON:0001285;1.52e-10;15!UBERON:0007684;1.52e-10;15!UBERON:0001851;1.94e-08;15!UBERON:0000353;1.94e-08;15!UBERON:0006853;4.52e-08;3!UBERON:0007685;4.52e-08;3!UBERON:0004134;4.52e-08;3!UBERON:0002113;3.21e-07;24!UBERON:0011143;3.21e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.41e-13,10;UBERON:0001225,6.02e-11,12;UBERON:0008987,6.02e-11,12;UBERON:0004211,1.16e-10,15;UBERON:0009773,1.16e-10,15;UBERON:0001231,1.16e-10,15;UBERON:0001285,1.16e-10,15;UBERON:0007684,1.16e-10,15;UBERON:0004208,1.16e-10,15;UBERON:0006555,7.20e-10,16;UBERON:0004819,7.20e-10,16;UBERON:0001851,1.99e-08,15;UBERON:0000353,1.99e-08,15;UBERON:0006853,4.56e-08,3;UBERON:0007685,4.56e-08,3;UBERON:0004134,4.56e-08,3 | |||
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|short_description=p6@NPC1 | |short_description=p6@NPC1 | ||
}} | }} |
Revision as of 15:18, 18 November 2012
Short description: | p6@NPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -155bp_to_NM_000271, uc002kum.3, uc010xba.1_5end |
EntrezGene: | NPC1 |
HGNC: | 7897 |
UniProt: | O15118 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.41e-13 | 10 |
nephron tubule epithelial cell | 1.41e-13 | 10 |
kidney cortical cell | 6.02e-11 | 12 |
renal cortical epithelial cell | 6.02e-11 | 12 |
epithelial cell of nephron | 1.16e-10 | 15 |
respiratory epithelial cell | 1.59e-09 | 13 |
kidney cell | 3.59e-09 | 17 |
kidney epithelial cell | 3.59e-09 | 17 |
brush border epithelial cell | 4.56e-08 | 3 |
kidney cortex tubule cell | 4.56e-08 | 3 |
epithelial cell of proximal tubule | 4.56e-08 | 3 |
light melanocyte | 3.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.41e-13 | 10 |
cortex of kidney | 6.02e-11 | 12 |
renal parenchyma | 6.02e-11 | 12 |
nephron epithelium | 1.16e-10 | 15 |
renal tubule | 1.16e-10 | 15 |
nephron tubule | 1.16e-10 | 15 |
nephron | 1.16e-10 | 15 |
uriniferous tubule | 1.16e-10 | 15 |
nephrogenic mesenchyme | 1.16e-10 | 15 |
excretory tube | 7.20e-10 | 16 |
kidney epithelium | 7.20e-10 | 16 |
cortex | 1.99e-08 | 15 |
parenchyma | 1.99e-08 | 15 |
renal cortex tubule | 4.56e-08 | 3 |
region of nephron tubule | 4.56e-08 | 3 |
proximal tubule | 4.56e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.