FFCP PHASE1:Mm9::chr6:40719029..40719070,+: Difference between revisions
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|id=chr6:40719029..40719070,+ | |id=chr6:40719029..40719070,+ | ||
|ontology_enrichment_celltype=CL:0000239!5.63e-16!6;CL:0000677!5.63e-16!6;CL:0000212!5.63e-16!6;CL:0000584!5.63e-16!6;CL:0000075!1.39e-13!7;CL:0002563!2.18e-10!9;CL:0002251!2.18e-10!9 | |ontology_enrichment_celltype=CL:0000239!5.63e-16!6;CL:0000677!5.63e-16!6;CL:0000212!5.63e-16!6;CL:0000584!5.63e-16!6;CL:0000075!1.39e-13!7;CL:0002563!2.18e-10!9;CL:0002251!2.18e-10!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.72e-19,6;CL:0000677,5.72e-19,6;CL:0000584,5.72e-19,6;CL:0000075,2.62e-16,7;CL:0002563,9.47e-13,9;CL:0002251,9.47e-13,9;CL:0000057,2.98e-08,1;CL:0000632,2.98e-08,1;CL:0002076,9.70e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.97e-20!15;UBERON:0000160!1.40e-17!43;UBERON:0001242!1.46e-15!13;UBERON:0000060!1.46e-15!13;UBERON:0001262!1.46e-15!13;UBERON:0004786!1.46e-15!13;UBERON:0005409!1.88e-14!59;UBERON:0004923!1.93e-11!24;UBERON:0003350!2.18e-10!9;UBERON:0004808!2.18e-10!9;UBERON:0001277!2.18e-10!9;UBERON:0000485!2.35e-08!11;UBERON:0001007!6.13e-07!128;UBERON:0001555!6.13e-07!128;UBERON:0007026!6.13e-07!128;UBERON:0004119!9.54e-07!130;UBERON:0000925!9.54e-07!130;UBERON:0006595!9.54e-07!130 | |ontology_enrichment_uberon=UBERON:0000344!8.97e-20!15;UBERON:0000160!1.40e-17!43;UBERON:0001242!1.46e-15!13;UBERON:0000060!1.46e-15!13;UBERON:0001262!1.46e-15!13;UBERON:0004786!1.46e-15!13;UBERON:0005409!1.88e-14!59;UBERON:0004923!1.93e-11!24;UBERON:0003350!2.18e-10!9;UBERON:0004808!2.18e-10!9;UBERON:0001277!2.18e-10!9;UBERON:0000485!2.35e-08!11;UBERON:0001007!6.13e-07!128;UBERON:0001555!6.13e-07!128;UBERON:0007026!6.13e-07!128;UBERON:0004119!9.54e-07!130;UBERON:0000925!9.54e-07!130;UBERON:0006595!9.54e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.68e-28,15;UBERON:0001242,1.91e-25,13;UBERON:0001262,1.91e-25,13;UBERON:0004786,1.91e-25,13;UBERON:0000160,4.94e-21,31;UBERON:0004923,1.34e-17,24;UBERON:0005409,1.48e-13,47;UBERON:0003350,9.47e-13,9;UBERON:0004808,9.47e-13,9;UBERON:0001277,9.47e-13,9;UBERON:0000485,1.77e-10,11;UBERON:0000331,1.03e-09,3;UBERON:0002116,1.03e-09,3;UBERON:0001204,1.03e-09,3;UBERON:0001168,1.03e-09,3;UBERON:0003199,6.57e-08,1;UBERON:0002108,1.67e-07,4;UBERON:0001007,2.77e-07,116;UBERON:0001555,2.77e-07,116;UBERON:0007026,2.77e-07,116;UBERON:0004119,3.88e-07,118;UBERON:0000925,3.88e-07,118;UBERON:0006595,3.88e-07,118 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,5.14189159221611,37.0662840160297,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.14704640533585,0,0,0.861884930743556,1.33016393619462,1.00812051903972,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,1.05780226665418,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0.648414149624083,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.36499771816861,5.14189159221611,37.0662840160297,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.14704640533585,0,0,0.861884930743556,1.33016393619462,1.00812051903972,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,1.05780226665418,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,1.79763881730844,0.648414149624083,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:40719029..40719070,+ | |short_description=p@chr6:40719029..40719070,+ | ||
}} | }} |
Revision as of 03:37, 15 November 2012
Short description: | p@chr6:40719029..40719070, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:40719029..40719070, + |
Coexpression cluster: | MCL_coexpression_mm9:309 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.72e-19 | 6 |
gut absorptive cell | 5.72e-19 | 6 |
enterocyte | 5.72e-19 | 6 |
columnar/cuboidal epithelial cell | 2.62e-16 | 7 |
intestinal epithelial cell | 9.47e-13 | 9 |
epithelial cell of alimentary canal | 9.47e-13 | 9 |
fibroblast | 2.98e-08 | 1 |
hepatic stellate cell | 2.98e-08 | 1 |
endo-epithelial cell | 9.70e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.68e-28 | 15 |
intestinal mucosa | 1.91e-25 | 13 |
wall of intestine | 1.91e-25 | 13 |
gastrointestinal system mucosa | 1.91e-25 | 13 |
intestine | 4.94e-21 | 31 |
organ component layer | 1.34e-17 | 24 |
gastrointestinal system | 1.48e-13 | 47 |
epithelium of mucosa | 9.47e-13 | 9 |
gastrointestinal system epithelium | 9.47e-13 | 9 |
intestinal epithelium | 9.47e-13 | 9 |
simple columnar epithelium | 1.77e-10 | 11 |
ileal mucosa | 1.03e-09 | 3 |
ileum | 1.03e-09 | 3 |
mucosa of small intestine | 1.03e-09 | 3 |
wall of small intestine | 1.03e-09 | 3 |
egg chamber | 6.57e-08 | 1 |
small intestine | 1.67e-07 | 4 |
digestive system | 2.77e-07 | 116 |
digestive tract | 2.77e-07 | 116 |
primitive gut | 2.77e-07 | 116 |
endoderm-derived structure | 3.88e-07 | 118 |
endoderm | 3.88e-07 | 118 |
presumptive endoderm | 3.88e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.