FFCP PHASE1:Mm9::chr13:20276809..20276858,+: Difference between revisions
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|id=chr13:20276809..20276858,+ | |id=chr13:20276809..20276858,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.26e-09!32;CL:0002032!1.26e-09!32;CL:0000037!1.26e-09!32;CL:0000566!1.26e-09!32;CL:0000837!1.26e-09!32;CL:0000838!2.35e-08!12;CL:0000542!4.83e-08!13;CL:0000051!4.83e-08!13;CL:0000084!7.49e-08!11;CL:0000827!7.49e-08!11;CL:0000738!1.34e-07!17;CL:0002087!1.34e-07!17;CL:0002031!7.80e-07!25;CL:0000791!9.10e-07!9;CL:0000789!9.10e-07!9;CL:0002420!9.10e-07!9;CL:0002419!9.10e-07!9;CL:0000790!9.10e-07!9 | |ontology_enrichment_celltype=CL:0000988!1.26e-09!32;CL:0002032!1.26e-09!32;CL:0000037!1.26e-09!32;CL:0000566!1.26e-09!32;CL:0000837!1.26e-09!32;CL:0000838!2.35e-08!12;CL:0000542!4.83e-08!13;CL:0000051!4.83e-08!13;CL:0000084!7.49e-08!11;CL:0000827!7.49e-08!11;CL:0000738!1.34e-07!17;CL:0002087!1.34e-07!17;CL:0002031!7.80e-07!25;CL:0000791!9.10e-07!9;CL:0000789!9.10e-07!9;CL:0002420!9.10e-07!9;CL:0002419!9.10e-07!9;CL:0000790!9.10e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.63e-12,32;CL:0002032,1.63e-12,32;CL:0000037,1.63e-12,32;CL:0000837,1.63e-12,32;CL:0000838,6.84e-11,12;CL:0000084,3.34e-10,11;CL:0000827,3.34e-10,11;CL:0000542,1.12e-09,13;CL:0000051,1.12e-09,13;CL:0002031,3.08e-09,25;CL:0000791,1.02e-08,9;CL:0000789,1.02e-08,9;CL:0002420,1.02e-08,9;CL:0002419,1.02e-08,9;CL:0000790,1.02e-08,9;CL:0000738,1.23e-08,17;CL:0002087,1.23e-08,17;CL:0000624,7.36e-08,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.02e-14!48;UBERON:0002390!1.28e-14!45;UBERON:0003061!1.28e-14!45;UBERON:0004177!7.42e-12!29;UBERON:0000065!4.06e-11!41;UBERON:0001004!6.44e-11!42;UBERON:0002370!6.08e-10!23;UBERON:0000974!6.08e-10!23;UBERON:0004807!6.08e-10!23;UBERON:0005058!6.08e-10!23;UBERON:0003351!6.08e-10!23;UBERON:0009113!6.08e-10!23;UBERON:0003295!6.08e-10!23;UBERON:0009722!6.08e-10!23;UBERON:0005562!6.08e-10!23;UBERON:0007690!6.08e-10!23;UBERON:0006562!8.20e-10!24;UBERON:0001557!8.20e-10!24;UBERON:0001042!8.20e-10!24;UBERON:0008814!8.20e-10!24;UBERON:0009145!8.20e-10!24;UBERON:0003081!9.44e-10!88;UBERON:0003408!1.29e-09!24;UBERON:0000926!2.91e-08!193;UBERON:0004120!2.91e-08!193;UBERON:0006603!2.91e-08!193;UBERON:0002405!7.40e-08!70;UBERON:0000072!4.05e-07!27 | |ontology_enrichment_uberon=UBERON:0002193!1.02e-14!48;UBERON:0002390!1.28e-14!45;UBERON:0003061!1.28e-14!45;UBERON:0004177!7.42e-12!29;UBERON:0000065!4.06e-11!41;UBERON:0001004!6.44e-11!42;UBERON:0002370!6.08e-10!23;UBERON:0000974!6.08e-10!23;UBERON:0004807!6.08e-10!23;UBERON:0005058!6.08e-10!23;UBERON:0003351!6.08e-10!23;UBERON:0009113!6.08e-10!23;UBERON:0003295!6.08e-10!23;UBERON:0009722!6.08e-10!23;UBERON:0005562!6.08e-10!23;UBERON:0007690!6.08e-10!23;UBERON:0006562!8.20e-10!24;UBERON:0001557!8.20e-10!24;UBERON:0001042!8.20e-10!24;UBERON:0008814!8.20e-10!24;UBERON:0009145!8.20e-10!24;UBERON:0003081!9.44e-10!88;UBERON:0003408!1.29e-09!24;UBERON:0000926!2.91e-08!193;UBERON:0004120!2.91e-08!193;UBERON:0006603!2.91e-08!193;UBERON:0002405!7.40e-08!70;UBERON:0000072!4.05e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.79e-18,45;UBERON:0003061,1.79e-18,45;UBERON:0002193,6.70e-18,48;UBERON:0002405,6.70e-18,48;UBERON:0004177,2.02e-17,29;UBERON:0005057,2.02e-17,29;UBERON:0000065,8.48e-17,41;UBERON:0001004,4.45e-16,42;UBERON:0002370,8.13e-15,23;UBERON:0000974,8.13e-15,23;UBERON:0004807,8.13e-15,23;UBERON:0005058,8.13e-15,23;UBERON:0003351,8.13e-15,23;UBERON:0009113,8.13e-15,23;UBERON:0003295,8.13e-15,23;UBERON:0009722,8.13e-15,23;UBERON:0005562,8.13e-15,23;UBERON:0007690,8.13e-15,23;UBERON:0006562,7.96e-14,24;UBERON:0003408,7.96e-14,24;UBERON:0001557,7.96e-14,24;UBERON:0001042,7.96e-14,24;UBERON:0008814,7.96e-14,24;UBERON:0009145,7.96e-14,24;UBERON:0000077,1.46e-12,35;UBERON:0000072,2.52e-11,27;UBERON:0003081,1.58e-08,87;UBERON:0001041,4.65e-08,80;UBERON:0005911,2.01e-07,69;UBERON:0007811,3.89e-07,36 | |||
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| ||
|short_description=p4@Elmo1 | |short_description=p4@Elmo1 | ||
}} | }} |
Revision as of 23:31, 14 November 2012
Short description: | p4@Elmo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Elmo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -364bp_to_uc007ppp.1_5end |
EntrezGene: | Elmo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.63e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.63e-12 | 32 |
hematopoietic stem cell | 1.63e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.63e-12 | 32 |
lymphoid lineage restricted progenitor cell | 6.84e-11 | 12 |
T cell | 3.34e-10 | 11 |
pro-T cell | 3.34e-10 | 11 |
lymphocyte | 1.12e-09 | 13 |
common lymphoid progenitor | 1.12e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 3.08e-09 | 25 |
mature alpha-beta T cell | 1.02e-08 | 9 |
alpha-beta T cell | 1.02e-08 | 9 |
immature T cell | 1.02e-08 | 9 |
mature T cell | 1.02e-08 | 9 |
immature alpha-beta T cell | 1.02e-08 | 9 |
leukocyte | 1.23e-08 | 17 |
nongranular leukocyte | 1.23e-08 | 17 |
CD4-positive, alpha-beta T cell | 7.36e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.79e-18 | 45 |
blood island | 1.79e-18 | 45 |
hemolymphoid system | 6.70e-18 | 48 |
immune system | 6.70e-18 | 48 |
hemopoietic organ | 2.02e-17 | 29 |
immune organ | 2.02e-17 | 29 |
respiratory tract | 8.48e-17 | 41 |
respiratory system | 4.45e-16 | 42 |
thymus | 8.13e-15 | 23 |
neck | 8.13e-15 | 23 |
respiratory system epithelium | 8.13e-15 | 23 |
hemolymphoid system gland | 8.13e-15 | 23 |
pharyngeal epithelium | 8.13e-15 | 23 |
thymic region | 8.13e-15 | 23 |
pharyngeal gland | 8.13e-15 | 23 |
entire pharyngeal arch endoderm | 8.13e-15 | 23 |
thymus primordium | 8.13e-15 | 23 |
early pharyngeal endoderm | 8.13e-15 | 23 |
pharynx | 7.96e-14 | 24 |
gland of gut | 7.96e-14 | 24 |
upper respiratory tract | 7.96e-14 | 24 |
chordate pharynx | 7.96e-14 | 24 |
pharyngeal arch system | 7.96e-14 | 24 |
pharyngeal region of foregut | 7.96e-14 | 24 |
mixed endoderm/mesoderm-derived structure | 1.46e-12 | 35 |
segment of respiratory tract | 2.52e-11 | 27 |
lateral plate mesoderm | 1.58e-08 | 87 |
foregut | 4.65e-08 | 80 |
endo-epithelium | 2.01e-07 | 69 |
craniocervical region | 3.89e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.