FFCP PHASE1:Mm9::chr2:180937212..180937239,-: Difference between revisions
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|id=chr2:180937212..180937239,- | |id=chr2:180937212..180937239,- | ||
|ontology_enrichment_celltype=CL:0000239!7.83e-08!6;CL:0000677!7.83e-08!6;CL:0000212!7.83e-08!6;CL:0000584!7.83e-08!6 | |ontology_enrichment_celltype=CL:0000239!7.83e-08!6;CL:0000677!7.83e-08!6;CL:0000212!7.83e-08!6;CL:0000584!7.83e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.16e-11,6;CL:0000677,1.16e-11,6;CL:0000584,1.16e-11,6;CL:0000075,7.34e-10,7;CL:0002563,1.85e-07,9;CL:0002251,1.85e-07,9;CL:0000682,5.17e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.49e-13!59;UBERON:0000344!4.53e-12!15;UBERON:0000160!7.43e-12!43;UBERON:0001242!3.82e-10!13;UBERON:0000060!3.82e-10!13;UBERON:0001262!3.82e-10!13;UBERON:0004786!3.82e-10!13;UBERON:0004923!2.35e-08!24 | |ontology_enrichment_uberon=UBERON:0005409!1.49e-13!59;UBERON:0000344!4.53e-12!15;UBERON:0000160!7.43e-12!43;UBERON:0001242!3.82e-10!13;UBERON:0000060!3.82e-10!13;UBERON:0001262!3.82e-10!13;UBERON:0004786!3.82e-10!13;UBERON:0004923!2.35e-08!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.98e-24,47;UBERON:0000160,1.21e-22,31;UBERON:0000344,4.21e-17,15;UBERON:0001242,4.78e-14,13;UBERON:0001262,4.78e-14,13;UBERON:0004786,4.78e-14,13;UBERON:0004923,4.53e-13,24;UBERON:0004119,9.79e-10,118;UBERON:0000925,9.79e-10,118;UBERON:0006595,9.79e-10,118;UBERON:0001007,2.73e-09,116;UBERON:0001555,2.73e-09,116;UBERON:0007026,2.73e-09,116;UBERON:0000014,8.10e-09,5;UBERON:0001003,8.10e-09,5;UBERON:0002097,8.10e-09,5;UBERON:0002199,8.10e-09,5;UBERON:0007029,8.10e-09,5;UBERON:0007376,8.10e-09,5;UBERON:0002416,8.10e-09,5;UBERON:0007383,8.10e-09,5;UBERON:0002108,1.36e-08,4;UBERON:0004921,6.44e-08,114;UBERON:0003350,1.85e-07,9;UBERON:0004808,1.85e-07,9;UBERON:0001277,1.85e-07,9;UBERON:0000331,3.79e-07,3;UBERON:0002116,3.79e-07,3;UBERON:0001204,3.79e-07,3;UBERON:0001168,3.79e-07,3 | |||
|phase1_expression=0,51.9973357382648,45.0449246995641,23.5922084819327,17.0304548181758,5.20425742926858,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,7.35965144849671,11.2410547722913,37.3250776674763,41.3531516312712,24.5637205261914,74.6792038463549,35.2842181663903,40.1332224286102,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0.258937883647172,0,0,0,0,0,0,0,40.5399747084373,0,0.884610551949874,0,0,0,9.31958806090611,0,0,46.4931840479636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0,0,0,0,0,0,0,0.556094498451196,5.57203466435466,6.99659263787008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0943402046714,23.5361004330554,0,0,0,0.201683524623343,0.444756087689741,0.760902504450237,14.2358718463353,3.78807595865225,2.26201687920243,2.38747766449381,0.38992817423824,15.2799299471218,9.07779809473716,6.17337947088538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,1.96635977658886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69465656691056,0,6.26567761177624,12.4327608555847,4.34253059482722,8.11731939221328,3.61109979439135,6.41257840585672,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,4.59994251231831,7.86105229486239,6.20375993370175,2.47960367176008,2.35580347785627,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0.100826185136841,0.292373642219257,0.0962118416403295,0,13.3770926332975,0,0,0,0,0,0,3.64426244434412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,0,0,0.320919209591815,0.252697211763798,0.760437899670719,0,0.0936415074698824,0,0.17230640686684,0,0.231768651889711,0.77163688185482,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,2.12197272079256,1.74867404556562,2.10538447600868,1.07435527024149,1.72159498861959,1.32354851471709,0.231867835620421 | |phase1_expression=0,51.9973357382648,45.0449246995641,23.5922084819327,17.0304548181758,5.20425742926858,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,7.35965144849671,11.2410547722913,37.3250776674763,41.3531516312712,24.5637205261914,74.6792038463549,35.2842181663903,40.1332224286102,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0.258937883647172,0,0,0,0,0,0,0,40.5399747084373,0,0.884610551949874,0,0,0,9.31958806090611,0,0,46.4931840479636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0,0,0,0,0,0,0,0.556094498451196,5.57203466435466,6.99659263787008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0943402046714,23.5361004330554,0,0,0,0.201683524623343,0.444756087689741,0.760902504450237,14.2358718463353,3.78807595865225,2.26201687920243,2.38747766449381,0.38992817423824,15.2799299471218,9.07779809473716,6.17337947088538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,1.96635977658886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69465656691056,0,6.26567761177624,12.4327608555847,4.34253059482722,8.11731939221328,3.61109979439135,6.41257840585672,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,4.59994251231831,7.86105229486239,6.20375993370175,2.47960367176008,2.35580347785627,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0.100826185136841,0.292373642219257,0.0962118416403295,0,13.3770926332975,0,0,0,0,0,0,3.64426244434412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,0,0,0.320919209591815,0.252697211763798,0.760437899670719,0,0.0936415074698824,0,0.17230640686684,0,0.231768651889711,0.77163688185482,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,2.12197272079256,1.74867404556562,2.10538447600868,1.07435527024149,1.72159498861959,1.32354851471709,0.231867835620421 | ||
|short_description=p1@Ptk6 | |short_description=p1@Ptk6 | ||
}} | }} |
Revision as of 19:32, 13 November 2012
Short description: | p1@Ptk6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptk6_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 254bp_to_ENSMUST00000016511, NM_009184, uc008olk.1, uc012cmj.1_5end |
EntrezGene: | Ptk6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.16e-11 | 6 |
gut absorptive cell | 1.16e-11 | 6 |
enterocyte | 1.16e-11 | 6 |
columnar/cuboidal epithelial cell | 7.34e-10 | 7 |
intestinal epithelial cell | 1.85e-07 | 9 |
epithelial cell of alimentary canal | 1.85e-07 | 9 |
M cell of gut | 5.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.98e-24 | 47 |
intestine | 1.21e-22 | 31 |
mucosa | 4.21e-17 | 15 |
intestinal mucosa | 4.78e-14 | 13 |
wall of intestine | 4.78e-14 | 13 |
gastrointestinal system mucosa | 4.78e-14 | 13 |
organ component layer | 4.53e-13 | 24 |
endoderm-derived structure | 9.79e-10 | 118 |
endoderm | 9.79e-10 | 118 |
presumptive endoderm | 9.79e-10 | 118 |
digestive system | 2.73e-09 | 116 |
digestive tract | 2.73e-09 | 116 |
primitive gut | 2.73e-09 | 116 |
zone of skin | 8.10e-09 | 5 |
skin epidermis | 8.10e-09 | 5 |
skin of body | 8.10e-09 | 5 |
integument | 8.10e-09 | 5 |
surface | 8.10e-09 | 5 |
outer epithelium | 8.10e-09 | 5 |
integumental system | 8.10e-09 | 5 |
enveloping layer of ectoderm | 8.10e-09 | 5 |
small intestine | 1.36e-08 | 4 |
subdivision of digestive tract | 6.44e-08 | 114 |
epithelium of mucosa | 1.85e-07 | 9 |
gastrointestinal system epithelium | 1.85e-07 | 9 |
intestinal epithelium | 1.85e-07 | 9 |
ileal mucosa | 3.79e-07 | 3 |
ileum | 3.79e-07 | 3 |
mucosa of small intestine | 3.79e-07 | 3 |
wall of small intestine | 3.79e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.