FFCP PHASE2:Mm9::chr11:96325901..96325951,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:78473 |HGNC= |MCL_coexpression_id=33 |TSSclassifier=NA |UniProt=uniprot:Q3UUV5,uniprot:Q3U5H2,uniprot:B1AQX1,unipro...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=78473 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q3UUV5,Q3U5H2,B1AQX1,A2A881,Q3V3I1,A8Y5F1,A8Y5F0,B2RWZ1,B1AQX5 | ||
|association_with_transcript=0bp_to_ENSMUST00000071510,ENSMUST00000100519,ENSMUST00000100521,ENSMUST00000103154,ENSMUST00000107662,ENSMUST00000136836,NM_001033186,NM_001177898,NM_001177899,uc007lca.2,uc007lcb.2,uc007lcc.2,uc007lcd.2,uc007lce.2,uc007lcf.2,uc007lcg.2,uc011ydi.1_5end | |association_with_transcript=0bp_to_ENSMUST00000071510,ENSMUST00000100519,ENSMUST00000100521,ENSMUST00000103154,ENSMUST00000107662,ENSMUST00000136836,NM_001033186,NM_001177898,NM_001177899,uc007lca.2,uc007lcb.2,uc007lcc.2,uc007lcd.2,uc007lce.2,uc007lcf.2,uc007lcg.2,uc011ydi.1_5end | ||
|cluster_id=chr11:96325901..96325951,+ | |cluster_id=chr11:96325901..96325951,+ | ||
Latest revision as of 01:38, 26 September 2015
| Short description: | p1@Skap1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Skap1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:33 |
| Association with transcript: | 0bp_to_ENSMUST00000071510, ENSMUST00000100519, ENSMUST00000100521, ENSMUST00000103154, ENSMUST00000107662, ENSMUST00000136836, NM_001033186, NM_001177898, NM_001177899, uc007lca.2, uc007lcb.2, uc007lcc.2, uc007lcd.2, uc007lce.2, uc007lcf.2, uc007lcg.2, uc011ydi.1_5end |
| EntrezGene: | Skap1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 2.46e-08 | 9 |
| alpha-beta T cell | 2.46e-08 | 9 |
| immature T cell | 2.46e-08 | 9 |
| mature T cell | 2.46e-08 | 9 |
| immature alpha-beta T cell | 2.46e-08 | 9 |
| CD4-positive, alpha-beta T cell | 1.57e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| hemopoietic organ | 4.60e-16 | 29 |
| immune organ | 4.60e-16 | 29 |
| mixed endoderm/mesoderm-derived structure | 1.20e-13 | 35 |
| gland of gut | 2.81e-13 | 24 |
| thymus | 8.56e-13 | 23 |
| neck | 8.56e-13 | 23 |
| respiratory system epithelium | 8.56e-13 | 23 |
| hemolymphoid system gland | 8.56e-13 | 23 |
| pharyngeal epithelium | 8.56e-13 | 23 |
| thymic region | 8.56e-13 | 23 |
| pharyngeal gland | 8.56e-13 | 23 |
| entire pharyngeal arch endoderm | 8.56e-13 | 23 |
| thymus primordium | 8.56e-13 | 23 |
| early pharyngeal endoderm | 8.56e-13 | 23 |
| hemolymphoid system | 2.89e-12 | 48 |
| immune system | 2.89e-12 | 48 |
| pharynx | 7.98e-12 | 24 |
| upper respiratory tract | 7.98e-12 | 24 |
| chordate pharynx | 7.98e-12 | 24 |
| pharyngeal arch system | 7.98e-12 | 24 |
| pharyngeal region of foregut | 7.98e-12 | 24 |
| hematopoietic system | 8.36e-11 | 45 |
| blood island | 8.36e-11 | 45 |
| respiratory system | 7.58e-10 | 42 |
| respiratory tract | 2.08e-09 | 41 |
| segment of respiratory tract | 2.13e-09 | 27 |
| gland | 4.77e-08 | 65 |
