FFCP PHASE1:Mm9::chr9:57492932..57492943,-: Difference between revisions
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{{FFCP|EntrezGene=12988|HGNC=|MCL_coexpression_id=165|UniProt=P41241|association_with_transcript=43bp_to_NM_007783,uc009pvk.1_5end|description=CAGE_peak_5_at_Csk_5end|id=chr9:57492932..57492943,-|ontology_enrichment_celltype=CL:0002320!4.99e-15!46;CL:0000134!4.99e-15!46;CL:0002031!6.56e-14!25;CL:0000988!3.00e-12!32;CL:0002032!3.00e-12!32;CL:0000037!3.00e-12!32;CL:0000566!3.00e-12!32;CL:0000837!3.00e-12!32;CL:0000219!6.31e-11!54;CL:0000738!2.49e-09!17;CL:0002087!2.49e-09!17;CL:0000034!1.30e-08!97;CL:0000723!1.49e-08!91;CL:0000048!1.49e-08!91;CL:0000838!1.90e-08!12;CL:0000084!8.81e-08!11;CL:0000827!8.81e-08!11;CL:0000063!3.00e-07!66;CL:0000542!3.40e-07!13;CL:0000051!3.40e-07!13;CL:0000839!7.52e-07!13|ontology_enrichment_celltype_v019_2=CL:0002031,9.10e-27,25;CL:0002320,9.28e-27,46;CL:0000134,9.28e-27,46;CL:0000988,1.61e-24,32;CL:0002032,1.61e-24,32;CL:0000037,1.61e-24,32;CL:0000837,1.61e-24,32;CL:0000219,3.86e-21,54;CL:0000034,1.56e-18,97;CL:0000738,9.23e-18,17;CL:0002087,9.23e-18,17;CL:0000723,1.55e-17,91;CL:0000048,1.55e-17,91;CL:0000838,5.17e-15,12;CL:0000084,1.03e-13,11;CL:0000827,1.03e-13,11;CL:0000542,1.41e-13,13;CL:0000051,1.41e-13,13;CL:0000839,7.07e-13,13;CL:0000049,3.65e-12,19;CL:0000791,2.27e-11,9;CL:0000789,2.27e-11,9;CL:0002420,2.27e-11,9;CL:0002419,2.27e-11,9;CL:0000790,2.27e-11,9;CL:0000763,2.94e-11,16;CL:0000624,2.06e-10,8;CL:0000050,8.76e-09,9;CL:0000107,3.54e-08,9;CL:0000893,7.54e-08,6;CL:0002489,7.54e-08,6;CL:0000898,7.54e-08,6;CL:0000809,7.54e-08,6;CL:0000810,7.54e-08,6;CL:0000895,7.54e-08,6;CL:0000808,7.54e-08,6;CL:0000894,7.54e-08,6;CL:0000806,7.54e-08,6;CL:0000807,7.54e-08,6;CL:0000805,7.54e-08,6;CL:0002425,7.54e-08,6;CL:0002436,7.54e-08,6;CL:0002427,7.54e-08,6;CL:0002428,7.54e-08,6;CL:0002429,7.54e-08,6;CL:0002433,7.54e-08,6;CL:0002431,7.54e-08,6;CL:0002432,7.54e-08,6;CL:0000553,1.19e-07,6;CL:0000556,1.19e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.02e-19!70;UBERON:0002193!3.03e-18!48;UBERON:0002390!9.58e-17!45;UBERON:0003061!9.58e-17!45;UBERON:0002384!4.99e-15!46;UBERON:0005057!2.58e-12!51;UBERON:0004177!4.11e-11!29;UBERON:0002370!4.42e-09!23;UBERON:0000974!4.42e-09!23;UBERON:0004807!4.42e-09!23;UBERON:0005058!4.42e-09!23;UBERON:0003351!4.42e-09!23;UBERON:0009113!4.42e-09!23;UBERON:0003295!4.42e-09!23;UBERON:0009722!4.42e-09!23;UBERON:0005562!4.42e-09!23;UBERON:0007690!4.42e-09!23;UBERON:0006562!7.76e-09!24;UBERON:0001557!7.76e-09!24;UBERON:0001042!7.76e-09!24;UBERON:0008814!7.76e-09!24;UBERON:0009145!7.76e-09!24;UBERON:0003408!3.41e-08!24;UBERON:0005911!2.68e-07!69;UBERON:0002368!4.04e-07!60;UBERON:0003929!4.24e-07!55;UBERON:0003081!9.24e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.85e-30,48;UBERON:0002405,2.85e-30,48;UBERON:0002390,6.89e-29,45;UBERON:0003061,6.89e-29,45;UBERON:0002384,9.28e-27,46;UBERON:0004177,2.34e-16,29;UBERON:0005057,2.34e-16,29;UBERON:0002370,5.09e-15,23;UBERON:0000974,5.09e-15,23;UBERON:0004807,5.09e-15,23;UBERON:0005058,5.09e-15,23;UBERON:0003351,5.09e-15,23;UBERON:0009113,5.09e-15,23;UBERON:0003295,5.09e-15,23;UBERON:0009722,5.09e-15,23;UBERON:0005562,5.09e-15,23;UBERON:0007690,5.09e-15,23;UBERON:0006562,3.70e-14,24;UBERON:0003408,3.70e-14,24;UBERON:0001557,3.70e-14,24;UBERON:0001042,3.70e-14,24;UBERON:0008814,3.70e-14,24;UBERON:0009145,3.70e-14,24;UBERON:0002371,5.28e-13,16;UBERON:0000077,2.10e-12,35;UBERON:0000072,5.71e-12,27;UBERON:0003081,2.37e-11,87;UBERON:0001474,6.54e-10,22;UBERON:0004765,6.54e-10,22;UBERON:0001434,6.54e-10,22;UBERON:0002410,3.54e-08,9;UBERON:0003929,4.68e-08,55;UBERON:0007811,1.12e-07,36;UBERON:0002204,2.72e-07,32;UBERON:0000490,7.04e-07,66|phase1_expression=0,1.04692622291808,0.909998478779072,0,0.500895729946347,0,0,5.68142623142936,1.83025338797167,6.55380673701582,1.36974374580404,2.15384829287408,2.56801094896809,4.89554253546385,1.33243904726265,1.41732687172878,1.39912375625629,7.25562980323947,7.54129384831563,10.6097412949508,0.0850432901510698,4.76596565764249,2.35079810225042,1.59992422793407,0.91763712426868,0,0,0.430942465371778,0.190023419456374,0,0.221730510655305,4.44521471421742,3.69038872550742,0,0,0,0,1.67412652294763,0,1.0470474879476,3.52938892818609,5.46436387966757,0.485510353031154,0.125896817975577,0,0,0,0.436050312760893,0,0,0,0,4.86569557567435,4.35217285206807,2.01656279485478,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,1.7997994345628,2.96659908770092,2.8419204597844,2.09720077362883,1.15265491596466,0.103689612308478,0.270011876663381,0,0.285650984403804,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.227178579999552,0.151143120213571,0.289864488701678,1.72084775396277,0,2.15881276655127,1.29955283489534,2.24013443548668,0.140444420131752,0.681721290312231,1.03914401841148,0.70667914902068,0,0,2.54805239706646,0,0,0,0,0.22836775943812,7.50919862576798,0.445326417194474,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0.433798070759735,2.65383165584962,0.161766849947409,0.441683036920787,0,0,0,0,0.510914110417183,2.03685711660064,1.79970819298022,0.889491589511453,0,0,0.125654352112864,0.173824320192276,0,0,0,0,1.11966273549084,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,0,0,1.02939162845886,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.569003702859245,0,0,0,0,0.210407459670956,0.126473074248515,0,0.470996183524124,0.123397163921801,0.889357881261447,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,1.72617682470486,0.162135226775035,0.549122826376163,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0,0.325929952884052,0.169745085775188,0,0.670025029767263,0.952174563544055,0,0.788175720530955,0.664394068946325,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,6.03165135757089,4.35124547054968,0.491764273019036,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,3.12350995437311,2.80050417052639,3.10659437338318,2.00518806674155,1.41538265394416,2.42886421004937,2.63030272120181,1.18586333383957,1.28528526568723,0.141940085208269,0.35613120733451,0.162886959353576,0.659880491890142,1.32745138339963,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0.493647061806363,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0.874442509889552,0.18542530201051,1.53783792718067,1.44470807574256,0.925972636848558,0.565105371014073,1.6403307326523,1.14389086603261,1.18984900995699,1.53946597556024,1.52019971184866,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0,0.404593039154462,0.0826534557253359,1.04702376793612,0,0,0,0,0.496375471371293,0,0,0,0.234714477291508,0,0,0,0,2.21207784439725,1.01362607645082,0.924398614483445,1.94881234466693,0.895133478337407,1.78813219303138,1.80293174279953,1.18151621739662,1.81739609906666,1.600342939755,1.81487133246313,3.02119430293232,2.11666051608725,1.5193997283604,0.226730383615211,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0.857473516316263,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.320125762024346,0,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0.290692833264657,0.376437521661322,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0.429742108096597,0.191288332068843,0,0.463735671240843|short_description=p5@Csk}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12988 | |||
|HGNC= | |||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P41241 | |||
|association_with_transcript=43bp_to_NM_007783,uc009pvk.1_5end | |||
|cluster_id=chr9:57492932..57492943,- | |||
|description=CAGE_peak_5_at_Csk_5end | |||
|id=chr9:57492932..57492943,- | |||
|ontology_enrichment_celltype=CL:0002320!4.99e-15!46;CL:0000134!4.99e-15!46;CL:0002031!6.56e-14!25;CL:0000988!3.00e-12!32;CL:0002032!3.00e-12!32;CL:0000037!3.00e-12!32;CL:0000566!3.00e-12!32;CL:0000837!3.00e-12!32;CL:0000219!6.31e-11!54;CL:0000738!2.49e-09!17;CL:0002087!2.49e-09!17;CL:0000034!1.30e-08!97;CL:0000723!1.49e-08!91;CL:0000048!1.49e-08!91;CL:0000838!1.90e-08!12;CL:0000084!8.81e-08!11;CL:0000827!8.81e-08!11;CL:0000063!3.00e-07!66;CL:0000542!3.40e-07!13;CL:0000051!3.40e-07!13;CL:0000839!7.52e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,9.10e-27,25;CL:0002320,9.28e-27,46;CL:0000134,9.28e-27,46;CL:0000988,1.61e-24,32;CL:0002032,1.61e-24,32;CL:0000037,1.61e-24,32;CL:0000837,1.61e-24,32;CL:0000219,3.86e-21,54;CL:0000034,1.56e-18,97;CL:0000738,9.23e-18,17;CL:0002087,9.23e-18,17;CL:0000723,1.55e-17,91;CL:0000048,1.55e-17,91;CL:0000838,5.17e-15,12;CL:0000084,1.03e-13,11;CL:0000827,1.03e-13,11;CL:0000542,1.41e-13,13;CL:0000051,1.41e-13,13;CL:0000839,7.07e-13,13;CL:0000049,3.65e-12,19;CL:0000791,2.27e-11,9;CL:0000789,2.27e-11,9;CL:0002420,2.27e-11,9;CL:0002419,2.27e-11,9;CL:0000790,2.27e-11,9;CL:0000763,2.94e-11,16;CL:0000624,2.06e-10,8;CL:0000050,8.76e-09,9;CL:0000107,3.54e-08,9;CL:0000893,7.54e-08,6;CL:0002489,7.54e-08,6;CL:0000898,7.54e-08,6;CL:0000809,7.54e-08,6;CL:0000810,7.54e-08,6;CL:0000895,7.54e-08,6;CL:0000808,7.54e-08,6;CL:0000894,7.54e-08,6;CL:0000806,7.54e-08,6;CL:0000807,7.54e-08,6;CL:0000805,7.54e-08,6;CL:0002425,7.54e-08,6;CL:0002436,7.54e-08,6;CL:0002427,7.54e-08,6;CL:0002428,7.54e-08,6;CL:0002429,7.54e-08,6;CL:0002433,7.54e-08,6;CL:0002431,7.54e-08,6;CL:0002432,7.54e-08,6;CL:0000553,1.19e-07,6;CL:0000556,1.19e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.02e-19!70;UBERON:0002193!3.03e-18!48;UBERON:0002390!9.58e-17!45;UBERON:0003061!9.58e-17!45;UBERON:0002384!4.99e-15!46;UBERON:0005057!2.58e-12!51;UBERON:0004177!4.11e-11!29;UBERON:0002370!4.42e-09!23;UBERON:0000974!4.42e-09!23;UBERON:0004807!4.42e-09!23;UBERON:0005058!4.42e-09!23;UBERON:0003351!4.42e-09!23;UBERON:0009113!4.42e-09!23;UBERON:0003295!4.42e-09!23;UBERON:0009722!4.42e-09!23;UBERON:0005562!4.42e-09!23;UBERON:0007690!4.42e-09!23;UBERON:0006562!7.76e-09!24;UBERON:0001557!7.76e-09!24;UBERON:0001042!7.76e-09!24;UBERON:0008814!7.76e-09!24;UBERON:0009145!7.76e-09!24;UBERON:0003408!3.41e-08!24;UBERON:0005911!2.68e-07!69;UBERON:0002368!4.04e-07!60;UBERON:0003929!4.24e-07!55;UBERON:0003081!9.24e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.85e-30,48;UBERON:0002405,2.85e-30,48;UBERON:0002390,6.89e-29,45;UBERON:0003061,6.89e-29,45;UBERON:0002384,9.28e-27,46;UBERON:0004177,2.34e-16,29;UBERON:0005057,2.34e-16,29;UBERON:0002370,5.09e-15,23;UBERON:0000974,5.09e-15,23;UBERON:0004807,5.09e-15,23;UBERON:0005058,5.09e-15,23;UBERON:0003351,5.09e-15,23;UBERON:0009113,5.09e-15,23;UBERON:0003295,5.09e-15,23;UBERON:0009722,5.09e-15,23;UBERON:0005562,5.09e-15,23;UBERON:0007690,5.09e-15,23;UBERON:0006562,3.70e-14,24;UBERON:0003408,3.70e-14,24;UBERON:0001557,3.70e-14,24;UBERON:0001042,3.70e-14,24;UBERON:0008814,3.70e-14,24;UBERON:0009145,3.70e-14,24;UBERON:0002371,5.28e-13,16;UBERON:0000077,2.10e-12,35;UBERON:0000072,5.71e-12,27;UBERON:0003081,2.37e-11,87;UBERON:0001474,6.54e-10,22;UBERON:0004765,6.54e-10,22;UBERON:0001434,6.54e-10,22;UBERON:0002410,3.54e-08,9;UBERON:0003929,4.68e-08,55;UBERON:0007811,1.12e-07,36;UBERON:0002204,2.72e-07,32;UBERON:0000490,7.04e-07,66 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,0,0.500895729946347,0,0,5.68142623142936,1.83025338797167,6.55380673701582,1.36974374580404,2.15384829287408,2.56801094896809,4.89554253546385,1.33243904726265,1.41732687172878,1.39912375625629,7.25562980323947,7.54129384831563,10.6097412949508,0.0850432901510698,4.76596565764249,2.35079810225042,1.59992422793407,0.91763712426868,0,0,0.430942465371778,0.190023419456374,0,0.221730510655305,4.44521471421742,3.69038872550742,0,0,0,0,1.67412652294763,0,1.0470474879476,3.52938892818609,5.46436387966757,0.485510353031154,0.125896817975577,0,0,0,0.436050312760893,0,0,0,0,4.86569557567435,4.35217285206807,2.01656279485478,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,1.7997994345628,2.96659908770092,2.8419204597844,2.09720077362883,1.15265491596466,0.103689612308478,0.270011876663381,0,0.285650984403804,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.227178579999552,0.151143120213571,0.289864488701678,1.72084775396277,0,2.15881276655127,1.29955283489534,2.24013443548668,0.140444420131752,0.681721290312231,1.03914401841148,0.70667914902068,0,0,2.54805239706646,0,0,0,0,0.22836775943812,7.50919862576798,0.445326417194474,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0.433798070759735,2.65383165584962,0.161766849947409,0.441683036920787,0,0,0,0,0.510914110417183,2.03685711660064,1.79970819298022,0.889491589511453,0,0,0.125654352112864,0.173824320192276,0,0,0,0,1.11966273549084,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,0,0,1.02939162845886,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.569003702859245,0,0,0,0,0.210407459670956,0.126473074248515,0,0.470996183524124,0.123397163921801,0.889357881261447,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,1.72617682470486,0.162135226775035,0.549122826376163,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0,0.325929952884052,0.169745085775188,0,0.670025029767263,0.952174563544055,0,0.788175720530955,0.664394068946325,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,6.03165135757089,4.35124547054968,0.491764273019036,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,3.12350995437311,2.80050417052639,3.10659437338318,2.00518806674155,1.41538265394416,2.42886421004937,2.63030272120181,1.18586333383957,1.28528526568723,0.141940085208269,0.35613120733451,0.162886959353576,0.659880491890142,1.32745138339963,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0.493647061806363,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0.874442509889552,0.18542530201051,1.53783792718067,1.44470807574256,0.925972636848558,0.565105371014073,1.6403307326523,1.14389086603261,1.18984900995699,1.53946597556024,1.52019971184866,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0,0.404593039154462,0.0826534557253359,1.04702376793612,0,0,0,0,0.496375471371293,0,0,0,0.234714477291508,0,0,0,0,2.21207784439725,1.01362607645082,0.924398614483445,1.94881234466693,0.895133478337407,1.78813219303138,1.80293174279953,1.18151621739662,1.81739609906666,1.600342939755,1.81487133246313,3.02119430293232,2.11666051608725,1.5193997283604,0.226730383615211,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0.857473516316263,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.320125762024346,0,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0.290692833264657,0.376437521661322,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0.429742108096597,0.191288332068843,0,0.463735671240843 | |||
|short_description=p5@Csk | |||
}} |
Revision as of 09:07, 5 August 2015
Short description: | p5@Csk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Csk_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 43bp_to_NM_007783, uc009pvk.1_5end |
EntrezGene: | 12988 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data