FFCP PHASE1:Mm9::chr6:85911666..85911677,-: Difference between revisions
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{{FFCP|EntrezGene=72102|HGNC=|MCL_coexpression_id=317|UniProt=Q6NXK5|association_with_transcript=-5bp_to_ENSMUST00000032071,ENSMUST00000151394,NM_028099,uc009cqp.1_5end|description=CAGE_peak_4_at_Dusp11_5end|id=chr6:85911666..85911677,-|ontology_enrichment_celltype=CL:0000791!2.71e-07!9;CL:0000789!2.71e-07!9;CL:0002420!2.71e-07!9;CL:0002419!2.71e-07!9;CL:0000790!2.71e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.71e-07,9;CL:0000789,2.71e-07,9;CL:0002420,2.71e-07,9;CL:0002419,2.71e-07,9;CL:0000790,2.71e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!2.95e-08!99;UBERON:0000072!6.42e-08!27;UBERON:0003929!9.79e-08!55;UBERON:0004177!1.10e-07!29;UBERON:0006562!1.96e-07!24;UBERON:0001557!1.96e-07!24;UBERON:0001042!1.96e-07!24;UBERON:0008814!1.96e-07!24;UBERON:0009145!1.96e-07!24;UBERON:0000063!2.05e-07!35;UBERON:0003408!2.37e-07!24;UBERON:0005057!3.05e-07!51;UBERON:0004119!4.51e-07!130;UBERON:0000925!4.51e-07!130;UBERON:0006595!4.51e-07!130;UBERON:0002370!5.46e-07!23;UBERON:0000974!5.46e-07!23;UBERON:0004807!5.46e-07!23;UBERON:0005058!5.46e-07!23;UBERON:0003351!5.46e-07!23;UBERON:0009113!5.46e-07!23;UBERON:0003295!5.46e-07!23;UBERON:0009722!5.46e-07!23;UBERON:0005562!5.46e-07!23;UBERON:0007690!5.46e-07!23;UBERON:0000490!5.72e-07!66;UBERON:0001007!6.63e-07!128;UBERON:0001555!6.63e-07!128;UBERON:0007026!6.63e-07!128;UBERON:0007023!7.58e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000077,2.03e-08,35;UBERON:0004119,2.31e-08,118;UBERON:0000925,2.31e-08,118;UBERON:0006595,2.31e-08,118;UBERON:0001007,3.44e-08,116;UBERON:0001555,3.44e-08,116;UBERON:0007026,3.44e-08,116;UBERON:0000072,6.42e-08,27;UBERON:0004921,7.52e-08,114;UBERON:0003929,9.79e-08,55;UBERON:0004177,1.10e-07,29;UBERON:0005057,1.10e-07,29;UBERON:0006562,1.96e-07,24;UBERON:0001557,1.96e-07,24;UBERON:0001042,1.96e-07,24;UBERON:0008814,1.96e-07,24;UBERON:0009145,1.96e-07,24;UBERON:0003408,2.37e-07,24;UBERON:0002370,5.46e-07,23;UBERON:0000974,5.46e-07,23;UBERON:0004807,5.46e-07,23;UBERON:0005058,5.46e-07,23;UBERON:0003351,5.46e-07,23;UBERON:0009113,5.46e-07,23;UBERON:0003295,5.46e-07,23;UBERON:0009722,5.46e-07,23;UBERON:0005562,5.46e-07,23;UBERON:0007690,5.46e-07,23;UBERON:0000490,5.72e-07,66;UBERON:0007023,7.61e-07,51;UBERON:0001041,7.75e-07,80|phase1_expression=1.92178616525753,8.72438519098403,10.4649825059593,8.16653370528441,10.0179145989269,5.37213670118047,5.13947809310157,12.2667157269497,16.3314917695933,14.7460651582856,8.21846247482424,8.61539317149633,14.5520620441525,13.6375827773636,5.3297561890506,6.2767332890846,4.19737126876888,7.88655413395594,9.73512478600745,11.0341309467488,4.42225108785563,0.992909512008853,3.13439746966722,5.59973479776923,4.35877634027623,8.03924749761028,6.46142994238612,8.40337807474967,3.80046838912748,5.04060259519861,4.21287970245079,1.27006134691926,1.84519436275371,0,3.75507105676657,2.82598897109437,2.85837098767317,7.11503772252743,5.4693474116666,8.37637990358077,8.2352408324342,8.87959130445979,8.25367600152961,4.15459499319405,3.24406179902447,2.56965453026354,3.12956537739216,2.8343270329458,2.85592037554813,2.13872888981712,2.93971485413261,1.43752564364972,9.89917375740644,12.3311564141929,13.1076581665561,4.63066984864705,4.01146815914259,4.12537673821954,5.26022798234954,4.7609188134483,2.53532561402472,3.38844532069132,3.55717918444456,3.1496490104849,2.96659908770092,1.4209602298922,2.09720077362883,1.92109152660777,2.38486108309499,2.8351247049655,2.73422449756797,4.28476476605705,3.75476519617743,2.57230678351403,3.54628242767475,4.5960939330501,1.10115880999389,4.21368215681119,3.07213066512487,4.3522474950964,3.47653045689157,4.16730696445408,3.35019598801657,2.8138130501584,3.51435969886663,3.53554302568401,4.12877874317399,4.10078780815661,5.45228591998925,2.87171928405785,4.92769630792852,10.3250865237766,7.47968467078526,4.31762553310254,8.4470934268197,9.40856462904405,3.7919993435573,2.55645483867087,2.07828803682295,2.47337702157238,1.26759077799012,2.56652954828636,7.64415719119937,7.11066703153331,3.89683873820185,5.57391704045217,7.07734223020697,5.1382745873577,18.6435276225964,3.11728492036132,2.60227990149204,3.04465478312141,1.84492397804847,4.22023393547343,1.76383060703557,2.89033160058254,5.19109432242185,7.08536848907567,3.5384422077995,3.23533699894818,4.85851340612866,5.81850303762267,5.59175283654366,8.49064311333487,3.77004072264219,5.62005521458901,5.27186547826049,3.59941638596045,5.20987930999565,4.6435098215495,7.32000964509802,4.02093926761166,3.65031072403781,3.3243009452943,4.1557608911912,3.73154905055843,2.13862664085664,4.10543003013307,3.79084137650512,2.73574412652416,1.82168620147785,1.14951052216736,1.98068342785884,3.91832526372859,2.24520447199382,1.66547836370305,1.87403449119458,6.72628763921441,1.07783996466421,3.78212160335639,4.04687585577082,3.28793598641362,5.00485048606076,5.57203466435466,6.58502836505419,1.59227413454795,2.80885274925294,2.31613116403244,2.55747149456033,2.27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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72102 | |||
|HGNC= | |||
|MCL_coexpression_id=317 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6NXK5 | |||
|association_with_transcript=-5bp_to_ENSMUST00000032071,ENSMUST00000151394,NM_028099,uc009cqp.1_5end | |||
|cluster_id=chr6:85911666..85911677,- | |||
|description=CAGE_peak_4_at_Dusp11_5end | |||
|id=chr6:85911666..85911677,- | |||
|ontology_enrichment_celltype=CL:0000791!2.71e-07!9;CL:0000789!2.71e-07!9;CL:0002420!2.71e-07!9;CL:0002419!2.71e-07!9;CL:0000790!2.71e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.71e-07,9;CL:0000789,2.71e-07,9;CL:0002420,2.71e-07,9;CL:0002419,2.71e-07,9;CL:0000790,2.71e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!2.95e-08!99;UBERON:0000072!6.42e-08!27;UBERON:0003929!9.79e-08!55;UBERON:0004177!1.10e-07!29;UBERON:0006562!1.96e-07!24;UBERON:0001557!1.96e-07!24;UBERON:0001042!1.96e-07!24;UBERON:0008814!1.96e-07!24;UBERON:0009145!1.96e-07!24;UBERON:0000063!2.05e-07!35;UBERON:0003408!2.37e-07!24;UBERON:0005057!3.05e-07!51;UBERON:0004119!4.51e-07!130;UBERON:0000925!4.51e-07!130;UBERON:0006595!4.51e-07!130;UBERON:0002370!5.46e-07!23;UBERON:0000974!5.46e-07!23;UBERON:0004807!5.46e-07!23;UBERON:0005058!5.46e-07!23;UBERON:0003351!5.46e-07!23;UBERON:0009113!5.46e-07!23;UBERON:0003295!5.46e-07!23;UBERON:0009722!5.46e-07!23;UBERON:0005562!5.46e-07!23;UBERON:0007690!5.46e-07!23;UBERON:0000490!5.72e-07!66;UBERON:0001007!6.63e-07!128;UBERON:0001555!6.63e-07!128;UBERON:0007026!6.63e-07!128;UBERON:0007023!7.58e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,2.03e-08,35;UBERON:0004119,2.31e-08,118;UBERON:0000925,2.31e-08,118;UBERON:0006595,2.31e-08,118;UBERON:0001007,3.44e-08,116;UBERON:0001555,3.44e-08,116;UBERON:0007026,3.44e-08,116;UBERON:0000072,6.42e-08,27;UBERON:0004921,7.52e-08,114;UBERON:0003929,9.79e-08,55;UBERON:0004177,1.10e-07,29;UBERON:0005057,1.10e-07,29;UBERON:0006562,1.96e-07,24;UBERON:0001557,1.96e-07,24;UBERON:0001042,1.96e-07,24;UBERON:0008814,1.96e-07,24;UBERON:0009145,1.96e-07,24;UBERON:0003408,2.37e-07,24;UBERON:0002370,5.46e-07,23;UBERON:0000974,5.46e-07,23;UBERON:0004807,5.46e-07,23;UBERON:0005058,5.46e-07,23;UBERON:0003351,5.46e-07,23;UBERON:0009113,5.46e-07,23;UBERON:0003295,5.46e-07,23;UBERON:0009722,5.46e-07,23;UBERON:0005562,5.46e-07,23;UBERON:0007690,5.46e-07,23;UBERON:0000490,5.72e-07,66;UBERON:0007023,7.61e-07,51;UBERON:0001041,7.75e-07,80 | |||
|phase1_expression=1.92178616525753,8.72438519098403,10.4649825059593,8.16653370528441,10.0179145989269,5.37213670118047,5.13947809310157,12.2667157269497,16.3314917695933,14.7460651582856,8.21846247482424,8.61539317149633,14.5520620441525,13.6375827773636,5.3297561890506,6.2767332890846,4.19737126876888,7.88655413395594,9.73512478600745,11.0341309467488,4.42225108785563,0.992909512008853,3.13439746966722,5.59973479776923,4.35877634027623,8.03924749761028,6.46142994238612,8.40337807474967,3.80046838912748,5.04060259519861,4.21287970245079,1.27006134691926,1.84519436275371,0,3.75507105676657,2.82598897109437,2.85837098767317,7.11503772252743,5.4693474116666,8.37637990358077,8.2352408324342,8.87959130445979,8.25367600152961,4.15459499319405,3.24406179902447,2.56965453026354,3.12956537739216,2.8343270329458,2.85592037554813,2.13872888981712,2.93971485413261,1.43752564364972,9.89917375740644,12.3311564141929,13.1076581665561,4.63066984864705,4.01146815914259,4.12537673821954,5.26022798234954,4.7609188134483,2.53532561402472,3.38844532069132,3.55717918444456,3.1496490104849,2.96659908770092,1.4209602298922,2.09720077362883,1.92109152660777,2.38486108309499,2.8351247049655,2.73422449756797,4.28476476605705,3.75476519617743,2.57230678351403,3.54628242767475,4.5960939330501,1.10115880999389,4.21368215681119,3.07213066512487,4.3522474950964,3.47653045689157,4.16730696445408,3.35019598801657,2.8138130501584,3.51435969886663,3.53554302568401,4.12877874317399,4.10078780815661,5.45228591998925,2.87171928405785,4.92769630792852,10.3250865237766,7.47968467078526,4.31762553310254,8.4470934268197,9.40856462904405,3.7919993435573,2.55645483867087,2.07828803682295,2.47337702157238,1.26759077799012,2.56652954828636,7.64415719119937,7.11066703153331,3.89683873820185,5.57391704045217,7.07734223020697,5.1382745873577,18.6435276225964,3.11728492036132,2.60227990149204,3.04465478312141,1.84492397804847,4.22023393547343,1.76383060703557,2.89033160058254,5.19109432242185,7.08536848907567,3.5384422077995,3.23533699894818,4.85851340612866,5.81850303762267,5.59175283654366,8.49064311333487,3.77004072264219,5.62005521458901,5.27186547826049,3.59941638596045,5.20987930999565,4.6435098215495,7.32000964509802,4.02093926761166,3.65031072403781,3.3243009452943,4.1557608911912,3.73154905055843,2.13862664085664,4.10543003013307,3.79084137650512,2.73574412652416,1.82168620147785,1.14951052216736,1.98068342785884,3.91832526372859,2.24520447199382,1.66547836370305,1.87403449119458,6.72628763921441,1.07783996466421,3.78212160335639,4.04687585577082,3.28793598641362,5.00485048606076,5.57203466435466,6.58502836505419,1.59227413454795,2.80885274925294,2.31613116403244,2.55747149456033,2.27838349789052,2.34526059981096,3.42117916775928,4.97163944728941,3.34499193970586,3.70241070929708,3.25547522650571,3.48755421819505,2.10177616260905,3.12663714835613,3.61168420974009,4.37771571547621,4.38599962275997,4.83010253640311,3.22095405024892,3.78521907415429,4.11618449517138,5.61711931072457,3.43785736662608,2.13288250535234,3.71578674976702,4.12375876230699,2.62188582010345,2.00140239460383,3.80451252225118,2.84717436926707,3.62337700392824,3.77002813200404,4.97391180102877,4.48417400373976,1.79763881730844,4.75503709724327,5.37681437786791,2.46568271239006,2.97046132785295,3.38123207019241,4.07302655690629,4.07300223052014,2.10407459670956,3.85742876457969,3.98547399544926,3.61097074035162,3.20832626196681,2.37162101669719,4.00428253718626,5.11053387294328,5.62155280962134,4.86864291332407,3.13530307678142,3.05551022137704,2.30156909960649,2.7562988551756,4.94210543738547,1.43768206527355,2.97712758134803,4.68056509671841,5.05157755894223,5.56131981917928,4.3419916922703,4.98833613449833,2.27389694124582,3.42226450528254,2.71592137240301,2.34690248288502,4.18765643604539,5.47500374037832,3.12213836572478,4.25614889086716,3.32197034473162,3.98636921643718,4.42430949732493,3.45369963731791,3.61622646453779,1.50791283939272,3.26343410291226,4.42587845717133,6.62248191131358,3.85321415970701,4.10240903072711,1.80328439914343,2.27223834483936,3.15508219416257,5.0757036758563,3.87762115919038,4.54040716109849,2.89638276307112,2.83076530788832,2.83367491172426,2.33804686329049,3.95287777946523,6.10510501201433,5.53566332312248,1.78065603667255,2.76907830901079,5.1140738121486,6.63725691699814,3.15614827001476,2.41858845571801,3.96070667487386,2.36241514304618,4.61152721915891,3.10113951801865,2.54473610634254,3.20847640546249,6.0046984007805,4.21674434299995,0,4.08527526904546,3.06103859853227,1.81102157295856,2.35770738534752,3.01478397191865,3.21063871683727,3.45552943264454,1.8267896946876,6.8054795338476,3.38931313382112,4.6310963591542,6.10079135883476,5.32832608096488,5.36785031860587,5.61050016814741,4.10352249362653,4.08073171281791,4.45020724825223,6.66396435111626,3.92135049130123,4.07427960213366,5.46268525313604,4.78429797023588,5.49067615695654,4.75939603982795,4.61839792668071,2.62579950228405,4.77335309007557,3.32152793260192,5.69294507955176,3.672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| |||
|short_description=p4@Dusp11 | |||
}} |
Revision as of 05:31, 6 August 2015
Short description: | p4@Dusp11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dusp11_5end |
Coexpression cluster: | MCL_coexpression_mm9:317 |
Association with transcript: | -5bp_to_ENSMUST00000032071, ENSMUST00000151394, NM_028099, uc009cqp.1_5end |
EntrezGene: | 72102 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.71e-07 | 9 |
alpha-beta T cell | 2.71e-07 | 9 |
immature T cell | 2.71e-07 | 9 |
mature T cell | 2.71e-07 | 9 |
immature alpha-beta T cell | 2.71e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 2.03e-08 | 35 |
endoderm-derived structure | 2.31e-08 | 118 |
endoderm | 2.31e-08 | 118 |
presumptive endoderm | 2.31e-08 | 118 |
digestive system | 3.44e-08 | 116 |
digestive tract | 3.44e-08 | 116 |
primitive gut | 3.44e-08 | 116 |
segment of respiratory tract | 6.42e-08 | 27 |
subdivision of digestive tract | 7.52e-08 | 114 |
gut epithelium | 9.79e-08 | 55 |
hemopoietic organ | 1.10e-07 | 29 |
immune organ | 1.10e-07 | 29 |
pharynx | 1.96e-07 | 24 |
upper respiratory tract | 1.96e-07 | 24 |
chordate pharynx | 1.96e-07 | 24 |
pharyngeal arch system | 1.96e-07 | 24 |
pharyngeal region of foregut | 1.96e-07 | 24 |
gland of gut | 2.37e-07 | 24 |
thymus | 5.46e-07 | 23 |
neck | 5.46e-07 | 23 |
respiratory system epithelium | 5.46e-07 | 23 |
hemolymphoid system gland | 5.46e-07 | 23 |
pharyngeal epithelium | 5.46e-07 | 23 |
thymic region | 5.46e-07 | 23 |
pharyngeal gland | 5.46e-07 | 23 |
entire pharyngeal arch endoderm | 5.46e-07 | 23 |
thymus primordium | 5.46e-07 | 23 |
early pharyngeal endoderm | 5.46e-07 | 23 |
unilaminar epithelium | 5.72e-07 | 66 |
adult organism | 7.61e-07 | 51 |
foregut | 7.75e-07 | 80 |