FFCP PHASE1:Mm9::chr6:54276822..54276839,+: Difference between revisions
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{{FFCP|EntrezGene=78004|HGNC=|MCL_coexpression_id=12|UniProt=Q9D1T5,A2RT92|association_with_transcript=-166bp_to_ENSMUST00000059138,NM_030024,uc009bzu.1_5end|description=CAGE_peak_4_at_Prr15_5end|id=chr6:54276822..54276839,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000075,2.26e-11,7;CL:0002563,9.48e-11,9;CL:0002251,9.48e-11,9;CL:0000239,1.67e-10,6;CL:0000677,1.67e-10,6;CL:0000584,1.67e-10,6;CL:0000066,5.89e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.09e-12!43;UBERON:0005409!1.29e-11!59;UBERON:0000344!1.53e-10!15;UBERON:0001242!3.82e-09!13;UBERON:0000060!3.82e-09!13;UBERON:0001262!3.82e-09!13;UBERON:0004786!3.82e-09!13;UBERON:0005156!1.30e-07!26;UBERON:0000990!1.30e-07!26;UBERON:0000485!9.20e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.10e-25,31;UBERON:0000344,2.04e-19,15;UBERON:0005409,1.18e-16,47;UBERON:0001242,1.79e-16,13;UBERON:0001262,1.79e-16,13;UBERON:0004786,1.79e-16,13;UBERON:0003350,9.48e-11,9;UBERON:0004808,9.48e-11,9;UBERON:0001277,9.48e-11,9;UBERON:0000007,1.16e-10,8;UBERON:0003296,1.16e-10,8;UBERON:0010133,1.16e-10,8;UBERON:0004923,1.50e-10,24;UBERON:0000485,2.04e-10,11;UBERON:0001894,3.39e-08,10;UBERON:0006222,3.39e-08,10;UBERON:0002108,5.56e-07,4|phase1_expression=0.480446541314382,36.2934423944936,27.7549536027617,12.40103266358,11.520601788766,6.71517087647559,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,10.5594999043648,11.4704640533585,17.2269589234506,16.3689558540448,17.0222273821852,10.8313349090133,12.6015064879965,9.5344119581781,0,0,0,1.44425809875637,1.49611180822643,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.365950574409639,1.04182674111352,0.279182999001381,0,0.15279824777681,0,0,0.372798891650601,0,0,1.15945795480671,0,0,0,0.649776417447669,0,0.842666520790511,0,0,0,1.40843419776681,0,0,0,0,0.760079596425296,0,2.39786147410026,0.258937883647172,1.03909497345377,0.346970653532272,0.304465478312141,0.691846491768175,0.60289056221049,0.352766121407114,0.628332956648377,0,0.289198713839823,0,0,0,0,1.86391761218122,0.292780797011547,0,2.29911349687732,0,0,0.127070227073065,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0.407357455401265,0.373220911830279,1.76905930903572,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,1.2604344302271,0.710234206755631,1.96764231747404,0.617068451549513,0.930135779001631,0.804820204198858,1.16765342367169,0.658239399653922,0,0.243206428637567,0,0,0.536825675041487,0,0.411618449517138,3.96502539580558,7.1401652999157,0.639864751605702,0.232236671860439,0.77320476793256,1.21010114774006,1.77902435075896,1.71203063501303,2.84717436926707,1.97638745668813,1.00534083520108,1.79060824837036,0.779856348476481,0.898819408654221,2.16138049874694,3.38540164532424,0.569003702859245,0.456994050438915,0,0.407302655690628,0.775809948670503,0.420814919341911,0.822074982615345,0.590440591918409,1.255989822731,0.493588655687202,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.568474235311454,0.325929952884052,0.339490171550376,0,0.335012514883631,0.714130922658041,1.56106918286239,0.788175720530955,0.44292937929755,0.637819074629948,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.709700426041343,0.35613120733451,0.81443479676788,2.14461159864296,0,0,0.302323556964751,0,0.295301892880773,0.922305443831782,1.03371317267288,1.45413491791002,0,0.316036757935816,0,0,3.40439605753788,1.08036656418786,3.62204314591713,2.35770738534752,2.30542303734956,1.07021290561242,1.97458824722545,3.34911444026059,0.23467170806371,0.63549621259146,2.8668691747145,0.16488625294148,0,0,0.119372344003136,0,1.7488850197791,0.18542530201051,0,0.82554747185289,0.185194527369712,0,0,0,0.169978429993855,0,0,0.954670618015114,0,0.609958401380546,0.86404272657441,1.25452977608681,0.655087691238533,0.539457385539283,0.495920734352016,0.523511883968059,1.29614973291793,1.24267862617385,0.56369293868419,0.448549638131936,0.827292452285488,0.583353565032143,1.54991788173277,1.18269287843545,1.05621514781179,2.3436789271911,1.8874681996628,1.44950472495604,1.15212002503146,0,0,0,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0,0,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0.19318959403219,1.68914227906064,1.83151624267265,0.214368379079066,0.501572104035363,0,0.920650473014354,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,1.01391719956096,0.565879024158229,0.187283014939765,0.128050304809739,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0,0.883193520806384,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0.548783918618318,0.789209134313529,0.679020569229309,0.561142271657738,0.593175090620871,0.29551344712669,0,0.309873682371932,0,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p4@Prr15}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:78004 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D1T5,uniprot:A2RT92 | |||
|association_with_transcript=-166bp_to_ENSMUST00000059138,NM_030024,uc009bzu.1_5end | |||
|cluster_id=chr6:54276822..54276839,+ | |||
|description=CAGE_peak_4_at_Prr15_5end | |||
|id=chr6:54276822..54276839,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,2.26e-11,7;CL:0002563,9.48e-11,9;CL:0002251,9.48e-11,9;CL:0000239,1.67e-10,6;CL:0000677,1.67e-10,6;CL:0000584,1.67e-10,6;CL:0000066,5.89e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.09e-12!43;UBERON:0005409!1.29e-11!59;UBERON:0000344!1.53e-10!15;UBERON:0001242!3.82e-09!13;UBERON:0000060!3.82e-09!13;UBERON:0001262!3.82e-09!13;UBERON:0004786!3.82e-09!13;UBERON:0005156!1.30e-07!26;UBERON:0000990!1.30e-07!26;UBERON:0000485!9.20e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.10e-25,31;UBERON:0000344,2.04e-19,15;UBERON:0005409,1.18e-16,47;UBERON:0001242,1.79e-16,13;UBERON:0001262,1.79e-16,13;UBERON:0004786,1.79e-16,13;UBERON:0003350,9.48e-11,9;UBERON:0004808,9.48e-11,9;UBERON:0001277,9.48e-11,9;UBERON:0000007,1.16e-10,8;UBERON:0003296,1.16e-10,8;UBERON:0010133,1.16e-10,8;UBERON:0004923,1.50e-10,24;UBERON:0000485,2.04e-10,11;UBERON:0001894,3.39e-08,10;UBERON:0006222,3.39e-08,10;UBERON:0002108,5.56e-07,4 | |||
|phase1_expression=0.480446541314382,36.2934423944936,27.7549536027617,12.40103266358,11.520601788766,6.71517087647559,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,10.5594999043648,11.4704640533585,17.2269589234506,16.3689558540448,17.0222273821852,10.8313349090133,12.6015064879965,9.5344119581781,0,0,0,1.44425809875637,1.49611180822643,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.365950574409639,1.04182674111352,0.279182999001381,0,0.15279824777681,0,0,0.372798891650601,0,0,1.15945795480671,0,0,0,0.649776417447669,0,0.842666520790511,0,0,0,1.40843419776681,0,0,0,0,0.760079596425296,0,2.39786147410026,0.258937883647172,1.03909497345377,0.346970653532272,0.304465478312141,0.691846491768175,0.60289056221049,0.352766121407114,0.628332956648377,0,0.289198713839823,0,0,0,0,1.86391761218122,0.292780797011547,0,2.29911349687732,0,0,0.127070227073065,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0.407357455401265,0.373220911830279,1.76905930903572,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,1.2604344302271,0.710234206755631,1.96764231747404,0.617068451549513,0.930135779001631,0.804820204198858,1.16765342367169,0.658239399653922,0,0.243206428637567,0,0,0.536825675041487,0,0.411618449517138,3.96502539580558,7.1401652999157,0.639864751605702,0.232236671860439,0.77320476793256,1.21010114774006,1.77902435075896,1.71203063501303,2.84717436926707,1.97638745668813,1.00534083520108,1.79060824837036,0.779856348476481,0.898819408654221,2.16138049874694,3.38540164532424,0.569003702859245,0.456994050438915,0,0.407302655690628,0.775809948670503,0.420814919341911,0.822074982615345,0.590440591918409,1.255989822731,0.493588655687202,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.568474235311454,0.325929952884052,0.339490171550376,0,0.335012514883631,0.714130922658041,1.56106918286239,0.788175720530955,0.44292937929755,0.637819074629948,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.709700426041343,0.35613120733451,0.81443479676788,2.14461159864296,0,0,0.302323556964751,0,0.295301892880773,0.922305443831782,1.03371317267288,1.45413491791002,0,0.316036757935816,0,0,3.40439605753788,1.08036656418786,3.62204314591713,2.35770738534752,2.30542303734956,1.07021290561242,1.97458824722545,3.34911444026059,0.23467170806371,0.63549621259146,2.8668691747145,0.16488625294148,0,0,0.119372344003136,0,1.7488850197791,0.18542530201051,0,0.82554747185289,0.185194527369712,0,0,0,0.169978429993855,0,0,0.954670618015114,0,0.609958401380546,0.86404272657441,1.25452977608681,0.655087691238533,0.539457385539283,0.495920734352016,0.523511883968059,1.29614973291793,1.24267862617385,0.56369293868419,0.448549638131936,0.827292452285488,0.583353565032143,1.54991788173277,1.18269287843545,1.05621514781179,2.3436789271911,1.8874681996628,1.44950472495604,1.15212002503146,0,0,0,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0,0,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0.19318959403219,1.68914227906064,1.83151624267265,0.214368379079066,0.501572104035363,0,0.920650473014354,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,1.01391719956096,0.565879024158229,0.187283014939765,0.128050304809739,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0,0.883193520806384,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0.548783918618318,0.789209134313529,0.679020569229309,0.561142271657738,0.593175090620871,0.29551344712669,0,0.309873682371932,0,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p4@Prr15 | |||
}} |
Revision as of 23:22, 5 August 2015
Short description: | p4@Prr15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prr15_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -166bp_to_ENSMUST00000059138, NM_030024, uc009bzu.1_5end |
EntrezGene: | 78004 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 2.26e-11 | 7 |
intestinal epithelial cell | 9.48e-11 | 9 |
epithelial cell of alimentary canal | 9.48e-11 | 9 |
brush border epithelial cell | 1.67e-10 | 6 |
gut absorptive cell | 1.67e-10 | 6 |
enterocyte | 1.67e-10 | 6 |
epithelial cell | 5.89e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.10e-25 | 31 |
mucosa | 2.04e-19 | 15 |
gastrointestinal system | 1.18e-16 | 47 |
intestinal mucosa | 1.79e-16 | 13 |
wall of intestine | 1.79e-16 | 13 |
gastrointestinal system mucosa | 1.79e-16 | 13 |
epithelium of mucosa | 9.48e-11 | 9 |
gastrointestinal system epithelium | 9.48e-11 | 9 |
intestinal epithelium | 9.48e-11 | 9 |
pituitary gland | 1.16e-10 | 8 |
gland of diencephalon | 1.16e-10 | 8 |
neuroendocrine gland | 1.16e-10 | 8 |
organ component layer | 1.50e-10 | 24 |
simple columnar epithelium | 2.04e-10 | 11 |
diencephalon | 3.39e-08 | 10 |
future diencephalon | 3.39e-08 | 10 |
small intestine | 5.56e-07 | 4 |