FFCP PHASE1:Hg19::chr9:112403059..112403079,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15845 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IXS6 | |||
|association_with_transcript=0bp_to_ENST00000374531,NM_001037293,uc004bef.2,uc004beg.2_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_PALM2_5end | |||
|id=chr9:112403059..112403079,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.37e-25;82!UBERON:0006241;2.08e-10;3!UBERON:0003057;2.08e-10;3!UBERON:0006215;1.68e-09;3!UBERON:0010122;1.59e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.58e-78!57;UBERON:0005068!3.58e-78!57;UBERON:0006241!3.58e-78!57;UBERON:0007135!3.58e-78!57;UBERON:0001017!6.10e-69!82;UBERON:0005743!6.47e-67!86;UBERON:0002616!1.65e-65!59;UBERON:0000955!4.37e-65!69;UBERON:0006238!4.37e-65!69;UBERON:0000073!3.54e-63!94;UBERON:0001016!3.54e-63!94;UBERON:0002346!3.26e-59!90;UBERON:0002780!5.44e-59!41;UBERON:0001890!5.44e-59!41;UBERON:0006240!5.44e-59!41;UBERON:0003075!2.07e-58!86;UBERON:0007284!2.07e-58!86;UBERON:0003080!2.72e-57!42;UBERON:0007023!7.59e-55!115;UBERON:0002020!3.97e-48!34;UBERON:0003528!3.97e-48!34;UBERON:0001893!5.94e-48!34;UBERON:0002791!2.47e-46!33;UBERON:0001869!2.01e-44!32;UBERON:0003056!2.73e-37!61;UBERON:0000924!3.96e-36!173;UBERON:0006601!3.96e-36!173;UBERON:0000153!5.60e-36!129;UBERON:0007811!5.60e-36!129;UBERON:0000033!8.09e-36!123;UBERON:0002619!5.90e-35!22;UBERON:0004121!6.33e-35!169;UBERON:0000956!1.04e-32!25;UBERON:0000203!1.04e-32!25;UBERON:0001950!1.58e-31!20;UBERON:0003076!6.11e-21!15;UBERON:0003057!6.11e-21!15;UBERON:0000025!5.49e-20!194;UBERON:0004732!6.09e-18!13;UBERON:0002308!6.50e-17!9;UBERON:0000125!6.50e-17!9;UBERON:0002420!1.28e-16!9;UBERON:0007245!1.28e-16!9;UBERON:0010009!1.28e-16!9;UBERON:0010011!1.28e-16!9;UBERON:0000454!1.28e-16!9;UBERON:0004733!3.13e-16!12;UBERON:0002028!3.13e-16!12;UBERON:0007277!3.13e-16!12;UBERON:0004111!1.47e-14!241;UBERON:0009663!2.19e-13!7;UBERON:0001894!3.34e-12!7;UBERON:0006222!3.34e-12!7;UBERON:0000064!7.24e-12!219;UBERON:0000477!1.08e-11!286;UBERON:0002680!1.52e-11!9;UBERON:0001895!1.52e-11!9;UBERON:0010092!1.52e-11!9;UBERON:0002298!1.65e-11!8;UBERON:0000200!2.82e-11!6;UBERON:0000475!2.91e-11!365;UBERON:0000483!3.45e-11!309;UBERON:0001871!3.99e-11!7;UBERON:0000119!6.69e-11!312;UBERON:0000062!1.09e-10!511;UBERON:0000349!6.42e-10!5;UBERON:0002021!1.09e-09!5;UBERON:0001872!1.85e-09!5;UBERON:0000481!4.23e-08!347;UBERON:0000369!4.44e-08!4;UBERON:0002435!4.44e-08!4;UBERON:0000204!4.44e-08!4;UBERON:0010082!4.44e-08!4;UBERON:0000468!2.24e-07!659;UBERON:0000922!3.11e-07!612;UBERON:0003296!6.14e-07!4;UBERON:0010133!6.14e-07!4;UBERON:0000467!6.44e-07!625;UBERON:0000988!6.63e-07!3;UBERON:0006331!7.01e-07!3;UBERON:0000480!7.29e-07!626;UBERON:0000923!8.97e-07!604;UBERON:0005291!8.97e-07!604;UBERON:0006598!8.97e-07!604;UBERON:0002532!8.97e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.41e-70;34!UBERON:0002780;8.64e-70;41!UBERON:0001890;8.64e-70;41!UBERON:0003528;1.53e-69;34!UBERON:0002020;1.53e-69;34!UBERON:0002791;3.41e-68;32!UBERON:0001869;5.25e-68;32!UBERON:0000073;1.36e-66;53!UBERON:0002616;1.36e-66;53!UBERON:0002619;3.75e-63;22!UBERON:0001950;7.73e-57;20!UBERON:0000956;3.67e-55;25!UBERON:0000203;3.67e-55;25!UBERON:0000955;1.85e-44;68!UBERON:0001017;4.58e-44;75!UBERON:0001016;3.17e-38;83!UBERON:0000125;1.57e-29;9!UBERON:0002308;1.57e-29;9!UBERON:0002420;5.62e-29;9!UBERON:0007245;5.62e-29;9!UBERON:0010009;5.62e-29;9!UBERON:0010011;5.62e-29;9!UBERON:0000454;5.62e-29;9!UBERON:0004732;2.47e-23;13!UBERON:0009663;4.49e-23;7!UBERON:0004733;2.17e-20;12!UBERON:0002028;2.17e-20;12!UBERON:0002298;5.00e-20;6!UBERON:0000200;2.83e-19;6!UBERON:0007023;1.54e-18;114!UBERON:0000349;9.36e-17;5!UBERON:0002021;2.21e-16;5!UBERON:0001871;2.47e-16;6!UBERON:0001894;4.80e-16;7!UBERON:0001872;6.42e-16;5!UBERON:0011216;6.42e-14;132!UBERON:0000369;2.13e-13;4!UBERON:0002435;2.13e-13;4!UBERON:0000204;2.13e-13;4!UBERON:0002680;1.80e-12;9!UBERON:0001895;1.80e-12;9!UBERON:0000988;2.57e-11;3!UBERON:0010314;2.78e-11;132!UBERON:0001870;1.77e-10;3!UBERON:0005383;1.80e-10;3!UBERON:0005382;1.80e-10;3!UBERON:0001896;1.89e-10;3!UBERON:0005290;1.89e-10;3!UBERON:0002240;2.08e-10;3!UBERON:0005174;2.08e-10;3!UBERON:0001137;2.08e-10;3!UBERON:0001875;2.50e-08;2!UBERON:0006514;2.50e-08;2!UBERON:0001897;2.88e-08;2!UBERON:0010225;2.88e-08;2!UBERON:0002148;3.59e-08;2!UBERON:0006331;3.59e-08;2!UBERON:0009662;3.59e-08;2!UBERON:0005162;3.72e-08;2!UBERON:0000122;3.72e-08;2!UBERON:0002784;3.80e-08;4!UBERON:0001954;6.50e-08;2!UBERON:0003022;6.50e-08;2!UBERON:0002421;6.50e-08;2!UBERON:0002600;6.50e-08;2!UBERON:0002771;8.64e-08;2!UBERON:0001876;1.33e-07;2!UBERON:0002702;1.56e-07;2!UBERON:0001873;1.59e-07;2!UBERON:0003296;5.24e-07;4!UBERON:0010133;5.24e-07;4!UBERON:0002360;7.39e-07;2!UBERON:0000094;7.39e-07;2!UBERON:0010743;7.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.75e-127,56;UBERON:0005068,1.75e-127,56;UBERON:0006241,1.75e-127,56;UBERON:0007135,1.75e-127,56;UBERON:0000073,3.15e-118,53;UBERON:0002616,3.15e-118,53;UBERON:0001017,3.76e-107,81;UBERON:0000955,1.74e-101,68;UBERON:0006238,1.74e-101,68;UBERON:0001016,1.55e-99,89;UBERON:0002780,3.54e-98,41;UBERON:0001890,3.54e-98,41;UBERON:0003080,3.54e-98,41;UBERON:0006240,3.54e-98,41;UBERON:0003075,7.51e-88,82;UBERON:0007284,7.51e-88,82;UBERON:0002346,8.89e-87,86;UBERON:0003528,2.78e-83,34;UBERON:0002020,2.78e-83,34;UBERON:0001893,5.74e-83,34;UBERON:0002791,1.02e-76,32;UBERON:0001869,1.61e-76,32;UBERON:0010371,8.10e-70,104;UBERON:0003056,2.70e-67,61;UBERON:0002619,3.87e-63,22;UBERON:0007023,9.07e-61,114;UBERON:0010314,2.15e-57,132;UBERON:0001950,7.86e-57,20;UBERON:0000956,3.77e-55,25;UBERON:0000203,3.77e-55,25;UBERON:0004121,1.16e-50,171;UBERON:0000924,1.16e-50,171;UBERON:0006601,1.16e-50,171;UBERON:0011216,5.23e-36,223;UBERON:0000025,8.78e-31,192;UBERON:0000125,1.37e-29,9;UBERON:0002308,1.37e-29,9;UBERON:0002420,4.78e-29,9;UBERON:0007245,4.78e-29,9;UBERON:0010009,4.78e-29,9;UBERON:0010011,4.78e-29,9;UBERON:0000454,4.78e-29,9;UBERON:0003076,1.21e-28,15;UBERON:0003057,1.21e-28,15;UBERON:0004732,2.38e-23,13;UBERON:0009663,3.94e-23,7;UBERON:0004111,2.83e-22,240;UBERON:0004733,2.09e-20,12;UBERON:0002028,2.09e-20,12;UBERON:0007277,2.09e-20,12;UBERON:0002298,4.92e-20,6;UBERON:0000200,2.83e-19,6;UBERON:0000483,8.62e-19,306;UBERON:0000119,1.73e-18,309;UBERON:0000349,8.50e-17,5;UBERON:0002021,2.24e-16,5;UBERON:0001871,2.38e-16,6;UBERON:0001894,5.34e-16,7;UBERON:0006222,5.34e-16,7;UBERON:0001872,5.84e-16,5;UBERON:0000369,1.90e-13,4;UBERON:0002435,1.90e-13,4;UBERON:0000204,1.90e-13,4;UBERON:0010082,1.90e-13,4;UBERON:0002680,1.77e-12,9;UBERON:0001895,1.77e-12,9;UBERON:0010092,1.77e-12,9;UBERON:0000988,2.57e-11,3;UBERON:0005383,1.75e-10,3;UBERON:0005382,1.75e-10,3;UBERON:0001896,1.86e-10,3;UBERON:0005290,1.86e-10,3;UBERON:0010096,1.86e-10,3;UBERON:0001870,1.92e-10,3;UBERON:0002240,2.12e-10,3;UBERON:0005174,2.12e-10,3;UBERON:0001137,2.12e-10,3;UBERON:0000923,8.44e-10,560;UBERON:0010316,8.44e-10,560;UBERON:0005291,8.44e-10,560;UBERON:0006598,8.44e-10,560;UBERON:0010317,8.44e-10,560;UBERON:0002532,8.44e-10,560;UBERON:0002050,1.23e-09,564;UBERON:0005423,5.83e-09,581;UBERON:0000922,1.52e-08,592;UBERON:0001875,2.46e-08,2;UBERON:0006514,2.46e-08,2;UBERON:0001897,2.93e-08,2;UBERON:0010225,2.93e-08,2;UBERON:0002148,3.60e-08,2;UBERON:0006331,3.60e-08,2;UBERON:0009662,3.60e-08,2;UBERON:0005162,3.72e-08,2;UBERON:0000122,3.72e-08,2;UBERON:0002784,3.89e-08,4;UBERON:0001954,6.62e-08,2;UBERON:0003022,6.62e-08,2;UBERON:0002421,6.62e-08,2;UBERON:0002600,6.62e-08,2;UBERON:0002771,8.64e-08,2;UBERON:0001876,1.28e-07,2;UBERON:0001873,1.51e-07,2;UBERON:0010122,1.51e-07,2;UBERON:0002702,1.56e-07,2;UBERON:0003296,5.67e-07,4;UBERON:0010133,5.67e-07,4;UBERON:0002360,7.86e-07,2;UBERON:0000094,7.86e-07,2;UBERON:0010743,7.86e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0.670065061337395,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9063623642608,25.6018337867133,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,0,18.4173221758092,20.5017496937691,5.98841394003583,0,0,0,0,0,0,0,0,0.173624994933292,25.6865001886013,13.9891868805473,4.5774520895125,2.87506075821184,5.31985714116385,8.99480128331287,0,0.139423744278603,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,36.3292106765849,4.01288823649394,29.0487912699421,0,0,0,0,0,7.34574627913176,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,18.1701984393372,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,63.0441303145279,53.5300031467693,0,0.859530882839914,0,0.558564802544508,0.916641696046735,0.717873024576814,0,0.429226048136571,0.446342914883745,2.01550417460179,0,0,0,0,0,0.196854963029498,0,23.0616610044698,30.9181731873277,0,0,0,0,0,15.0051404945321,0,0,0.367182116944987,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,49.5153722864739,31.6035918165029,0,0,0,0.943225830597996,0,0,0,0,0,0,0,0,0,0.157054096250234,12.4049545195378,18.6700185300004,26.540477309778,18.9225034577724,15.1972800605488,21.3611626118359,0,0.499921631848426,0,0,0,0.936669811613763,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4168559533808,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,2.33832412111851,0.247871528518004,0,0,0.0788617450012534,0,0,0,18.9476214034556,22.6714522120936,34.1616458382304,23.3832655234461,7.31007919042983,13.9006077453078,22.2836390971955,32.8369666596055,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,17.1545464930722,15.6215619722769,23.9756683941374,17.7564268542939,10.3925213713462,0,0.496211178389294,0,0.127762427639595,0.535701835878287,1.3451348888753,1.21393120847326,1.36597314810779,0,0,0.342976018874837,27.5277418556168,14.9304195987667,0,0,0,18.5396396100882,0.280272163313789,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,33.7650563437706,11.5848096127564,14.792950465419,0,0,0,0,0,0,0,0,0,25.6577853841098,0,15.2980852929558,8.72701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,53.0668441253619,39.0976724357964,0,0.714193294391221,0,0.124149428591716,0,0.0636471582781649,0.404234377916439,0,0.684466602170562,0,0.430333232356058,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PALM2 | |||
}} |
Revision as of 02:41, 23 January 2014
Short description: | p3@PALM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PALM2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000374531, NM_001037293, uc004bef.2, uc004beg.2_5end |
EntrezGene: | PALM2 |
HGNC: | 15845 |
UniProt: | Q8IXS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data