FFCP PHASE1:Mm9::chr3:130815455..130815467,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16842|HGNC=|MCL_coexpression_id=0|UniProt=Q8C402,Q3TEN5|association_with_transcript=-247bp_to_ENSMUST00000098611,ENSMUST00000136147,uc008rji.1,uc008rjj.1,uc008rjk.1_5end|description=CAGE_peak_10_at_Lef1_5end|id=chr3:130815455..130815467,+|ontology_enrichment_celltype=CL:0000791!1.46e-08!9;CL:0000789!1.46e-08!9;CL:0002420!1.46e-08!9;CL:0002419!1.46e-08!9;CL:0000790!1.46e-08!9;CL:0000624!2.05e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,5.41e-11,9;CL:0000789,5.41e-11,9;CL:0002420,5.41e-11,9;CL:0002419,5.41e-11,9;CL:0000790,5.41e-11,9;CL:0000084,5.83e-09,11;CL:0000827,5.83e-09,11;CL:0000838,3.38e-08,12;CL:0000624,3.46e-08,8;CL:0000542,1.50e-07,13;CL:0000051,1.50e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.75e-17!23;UBERON:0000974!1.75e-17!23;UBERON:0004807!1.75e-17!23;UBERON:0005058!1.75e-17!23;UBERON:0003351!1.75e-17!23;UBERON:0009113!1.75e-17!23;UBERON:0003295!1.75e-17!23;UBERON:0009722!1.75e-17!23;UBERON:0005562!1.75e-17!23;UBERON:0007690!1.75e-17!23;UBERON:0006562!1.75e-16!24;UBERON:0003408!1.75e-16!24;UBERON:0001557!1.75e-16!24;UBERON:0001042!1.75e-16!24;UBERON:0008814!1.75e-16!24;UBERON:0009145!1.75e-16!24;UBERON:0004177!1.42e-15!29;UBERON:0000072!6.14e-14!27;UBERON:0000063!2.35e-10!35;UBERON:0002193!8.65e-10!48;UBERON:0000065!8.79e-10!41;UBERON:0002390!1.01e-09!45;UBERON:0003061!1.01e-09!45;UBERON:0001004!2.16e-09!42;UBERON:0000473!2.54e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.62e-27,23;UBERON:0000974,1.62e-27,23;UBERON:0004807,1.62e-27,23;UBERON:0005058,1.62e-27,23;UBERON:0003351,1.62e-27,23;UBERON:0009113,1.62e-27,23;UBERON:0003295,1.62e-27,23;UBERON:0009722,1.62e-27,23;UBERON:0005562,1.62e-27,23;UBERON:0007690,1.62e-27,23;UBERON:0006562,2.80e-26,24;UBERON:0003408,2.80e-26,24;UBERON:0001557,2.80e-26,24;UBERON:0001042,2.80e-26,24;UBERON:0008814,2.80e-26,24;UBERON:0009145,2.80e-26,24;UBERON:0000072,4.06e-23,27;UBERON:0004177,2.26e-21,29;UBERON:0005057,2.26e-21,29;UBERON:0000077,2.50e-17,35;UBERON:0007811,8.71e-17,36;UBERON:0000065,1.82e-14,41;UBERON:0002193,4.17e-14,48;UBERON:0002405,4.17e-14,48;UBERON:0001004,4.54e-14,42;UBERON:0000153,1.09e-13,43;UBERON:0002390,5.56e-13,45;UBERON:0003061,5.56e-13,45;UBERON:0003929,3.27e-10,55;UBERON:0002368,3.59e-09,60;UBERON:0002530,2.72e-08,65;UBERON:0000490,3.93e-08,66;UBERON:0005911,1.11e-07,69;UBERON:0000949,2.88e-07,72;UBERON:0000926,5.81e-07,120;UBERON:0004120,5.81e-07,120;UBERON:0006603,5.81e-07,120|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.16210991097419,0.985521055061667,0.70219357896598,0,0.0797721589953364,2.73921167889929,1.57356724354195,0,0,0,0.473193248037357,0.548457734422955,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,2.01656279485478,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,1.8125651855302,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0.643011105094777,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0.301564624640779,0,0.328281799490123,0,0,0,0,0,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1495845239459,0.299033092087958,0.496375471371293,0.777804753376191,1.29159823477731,0.168956125490778,0.117357238645754,0,0.419437377702843,9.42178071221424,16.7057403629562,2.21207784439725,0.202725215290164,0.924398614483445,1.42912905275575,0.716106782669926,2.18549490259391,1.44234539423963,2.36303243479324,2.62512769865184,1.600342939755,1.20991422164209,2.43644701849381,1.73181314952593,2.57129184799452,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p10@Lef1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16842 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C402,uniprot:Q3TEN5 | |||
|association_with_transcript=-247bp_to_ENSMUST00000098611,ENSMUST00000136147,uc008rji.1,uc008rjj.1,uc008rjk.1_5end | |||
|cluster_id=chr3:130815455..130815467,+ | |||
|description=CAGE_peak_10_at_Lef1_5end | |||
|id=chr3:130815455..130815467,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.46e-08!9;CL:0000789!1.46e-08!9;CL:0002420!1.46e-08!9;CL:0002419!1.46e-08!9;CL:0000790!1.46e-08!9;CL:0000624!2.05e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.41e-11,9;CL:0000789,5.41e-11,9;CL:0002420,5.41e-11,9;CL:0002419,5.41e-11,9;CL:0000790,5.41e-11,9;CL:0000084,5.83e-09,11;CL:0000827,5.83e-09,11;CL:0000838,3.38e-08,12;CL:0000624,3.46e-08,8;CL:0000542,1.50e-07,13;CL:0000051,1.50e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.75e-17!23;UBERON:0000974!1.75e-17!23;UBERON:0004807!1.75e-17!23;UBERON:0005058!1.75e-17!23;UBERON:0003351!1.75e-17!23;UBERON:0009113!1.75e-17!23;UBERON:0003295!1.75e-17!23;UBERON:0009722!1.75e-17!23;UBERON:0005562!1.75e-17!23;UBERON:0007690!1.75e-17!23;UBERON:0006562!1.75e-16!24;UBERON:0003408!1.75e-16!24;UBERON:0001557!1.75e-16!24;UBERON:0001042!1.75e-16!24;UBERON:0008814!1.75e-16!24;UBERON:0009145!1.75e-16!24;UBERON:0004177!1.42e-15!29;UBERON:0000072!6.14e-14!27;UBERON:0000063!2.35e-10!35;UBERON:0002193!8.65e-10!48;UBERON:0000065!8.79e-10!41;UBERON:0002390!1.01e-09!45;UBERON:0003061!1.01e-09!45;UBERON:0001004!2.16e-09!42;UBERON:0000473!2.54e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.62e-27,23;UBERON:0000974,1.62e-27,23;UBERON:0004807,1.62e-27,23;UBERON:0005058,1.62e-27,23;UBERON:0003351,1.62e-27,23;UBERON:0009113,1.62e-27,23;UBERON:0003295,1.62e-27,23;UBERON:0009722,1.62e-27,23;UBERON:0005562,1.62e-27,23;UBERON:0007690,1.62e-27,23;UBERON:0006562,2.80e-26,24;UBERON:0003408,2.80e-26,24;UBERON:0001557,2.80e-26,24;UBERON:0001042,2.80e-26,24;UBERON:0008814,2.80e-26,24;UBERON:0009145,2.80e-26,24;UBERON:0000072,4.06e-23,27;UBERON:0004177,2.26e-21,29;UBERON:0005057,2.26e-21,29;UBERON:0000077,2.50e-17,35;UBERON:0007811,8.71e-17,36;UBERON:0000065,1.82e-14,41;UBERON:0002193,4.17e-14,48;UBERON:0002405,4.17e-14,48;UBERON:0001004,4.54e-14,42;UBERON:0000153,1.09e-13,43;UBERON:0002390,5.56e-13,45;UBERON:0003061,5.56e-13,45;UBERON:0003929,3.27e-10,55;UBERON:0002368,3.59e-09,60;UBERON:0002530,2.72e-08,65;UBERON:0000490,3.93e-08,66;UBERON:0005911,1.11e-07,69;UBERON:0000949,2.88e-07,72;UBERON:0000926,5.81e-07,120;UBERON:0004120,5.81e-07,120;UBERON:0006603,5.81e-07,120 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.16210991097419,0.985521055061667,0.70219357896598,0,0.0797721589953364,2.73921167889929,1.57356724354195,0,0,0,0.473193248037357,0.548457734422955,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,2.01656279485478,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,1.8125651855302,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0.643011105094777,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0.301564624640779,0,0.328281799490123,0,0,0,0,0,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1495845239459,0.299033092087958,0.496375471371293,0.777804753376191,1.29159823477731,0.168956125490778,0.117357238645754,0,0.419437377702843,9.42178071221424,16.7057403629562,2.21207784439725,0.202725215290164,0.924398614483445,1.42912905275575,0.716106782669926,2.18549490259391,1.44234539423963,2.36303243479324,2.62512769865184,1.600342939755,1.20991422164209,2.43644701849381,1.73181314952593,2.57129184799452,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p10@Lef1 | |||
}} |
Revision as of 01:07, 6 August 2015
Short description: | p10@Lef1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Lef1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -247bp_to_ENSMUST00000098611, ENSMUST00000136147, uc008rji.1, uc008rjj.1, uc008rjk.1_5end |
EntrezGene: | 16842 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.41e-11 | 9 |
alpha-beta T cell | 5.41e-11 | 9 |
immature T cell | 5.41e-11 | 9 |
mature T cell | 5.41e-11 | 9 |
immature alpha-beta T cell | 5.41e-11 | 9 |
T cell | 5.83e-09 | 11 |
pro-T cell | 5.83e-09 | 11 |
lymphoid lineage restricted progenitor cell | 3.38e-08 | 12 |
CD4-positive, alpha-beta T cell | 3.46e-08 | 8 |
lymphocyte | 1.50e-07 | 13 |
common lymphoid progenitor | 1.50e-07 | 13 |