FFCP PHASE1:Mm9::chr3:122602361..122602377,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=309|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:122602361..122602377,+|id=chr3:122602361..122602377,+|ontology_enrichment_celltype=CL:0000239!1.55e-10!6;CL:0000677!1.55e-10!6;CL:0000212!1.55e-10!6;CL:0000584!1.55e-10!6;CL:0000075!6.95e-09!7|ontology_enrichment_celltype_v019_2=CL:0000682,1.87e-12,3;CL:0000239,7.85e-12,6;CL:0000677,7.85e-12,6;CL:0000584,7.85e-12,6;CL:0000075,3.73e-10,7;CL:0002563,6.51e-08,9;CL:0002251,6.51e-08,9;CL:0000066,2.10e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.09e-23!43;UBERON:0005409!6.32e-20!59;UBERON:0000344!6.04e-15!15;UBERON:0001242!2.94e-12!13;UBERON:0000060!2.94e-12!13;UBERON:0001262!2.94e-12!13;UBERON:0004786!2.94e-12!13;UBERON:0004923!3.79e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.48e-36,31;UBERON:0005409,1.19e-22,47;UBERON:0000344,4.77e-17,15;UBERON:0001242,2.08e-15,13;UBERON:0001262,2.08e-15,13;UBERON:0004786,2.08e-15,13;UBERON:0004923,3.07e-10,24;UBERON:0002108,8.51e-10,4;UBERON:0001155,6.82e-09,2;UBERON:0000059,6.82e-09,2;UBERON:0001007,1.63e-08,116;UBERON:0001555,1.63e-08,116;UBERON:0007026,1.63e-08,116;UBERON:0004119,2.58e-08,118;UBERON:0000925,2.58e-08,118;UBERON:0006595,2.58e-08,118;UBERON:0003350,6.51e-08,9;UBERON:0004808,6.51e-08,9;UBERON:0001277,6.51e-08,9;UBERON:0004921,1.38e-07,114|phase1_expression=0,2.44282785347553,2.27499619694768,6.35174843744343,36.5653882860833,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.60586496747019,1.72269589234506,1.29228598847722,1.939241094173,3.42042155021473,1.76421090831952,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,6.34681359992506,0,0,0.128867461322093,0.403367049246685,1.11189021922435,2.09248188723815,4.2707615539006,0.823494773620054,1.25667604400135,0.397912944082302,0.19496408711912,4.49409704327111,1.51296634912286,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962757628775446,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.436039249896986,0.188218760830661,0,0.365855945745545,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0,0,0|short_description=p@chr3:122602361..122602377,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=309 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:122602361..122602377,+ | |||
|description=CAGE_peak_at_chr3:122602361..122602377,+ | |||
|id=chr3:122602361..122602377,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.55e-10!6;CL:0000677!1.55e-10!6;CL:0000212!1.55e-10!6;CL:0000584!1.55e-10!6;CL:0000075!6.95e-09!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.87e-12,3;CL:0000239,7.85e-12,6;CL:0000677,7.85e-12,6;CL:0000584,7.85e-12,6;CL:0000075,3.73e-10,7;CL:0002563,6.51e-08,9;CL:0002251,6.51e-08,9;CL:0000066,2.10e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.09e-23!43;UBERON:0005409!6.32e-20!59;UBERON:0000344!6.04e-15!15;UBERON:0001242!2.94e-12!13;UBERON:0000060!2.94e-12!13;UBERON:0001262!2.94e-12!13;UBERON:0004786!2.94e-12!13;UBERON:0004923!3.79e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.48e-36,31;UBERON:0005409,1.19e-22,47;UBERON:0000344,4.77e-17,15;UBERON:0001242,2.08e-15,13;UBERON:0001262,2.08e-15,13;UBERON:0004786,2.08e-15,13;UBERON:0004923,3.07e-10,24;UBERON:0002108,8.51e-10,4;UBERON:0001155,6.82e-09,2;UBERON:0000059,6.82e-09,2;UBERON:0001007,1.63e-08,116;UBERON:0001555,1.63e-08,116;UBERON:0007026,1.63e-08,116;UBERON:0004119,2.58e-08,118;UBERON:0000925,2.58e-08,118;UBERON:0006595,2.58e-08,118;UBERON:0003350,6.51e-08,9;UBERON:0004808,6.51e-08,9;UBERON:0001277,6.51e-08,9;UBERON:0004921,1.38e-07,114 | |||
|phase1_expression=0,2.44282785347553,2.27499619694768,6.35174843744343,36.5653882860833,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.60586496747019,1.72269589234506,1.29228598847722,1.939241094173,3.42042155021473,1.76421090831952,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,6.34681359992506,0,0,0.128867461322093,0.403367049246685,1.11189021922435,2.09248188723815,4.2707615539006,0.823494773620054,1.25667604400135,0.397912944082302,0.19496408711912,4.49409704327111,1.51296634912286,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962757628775446,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.436039249896986,0.188218760830661,0,0.365855945745545,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr3:122602361..122602377,+ | |||
}} |
Latest revision as of 23:33, 5 August 2015
Short description: | p@chr3:122602361..122602377, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:122602361..122602377, + |
Coexpression cluster: | MCL_coexpression_mm9:309 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.87e-12 | 3 |
brush border epithelial cell | 7.85e-12 | 6 |
gut absorptive cell | 7.85e-12 | 6 |
enterocyte | 7.85e-12 | 6 |
columnar/cuboidal epithelial cell | 3.73e-10 | 7 |
intestinal epithelial cell | 6.51e-08 | 9 |
epithelial cell of alimentary canal | 6.51e-08 | 9 |
epithelial cell | 2.10e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.48e-36 | 31 |
gastrointestinal system | 1.19e-22 | 47 |
mucosa | 4.77e-17 | 15 |
intestinal mucosa | 2.08e-15 | 13 |
wall of intestine | 2.08e-15 | 13 |
gastrointestinal system mucosa | 2.08e-15 | 13 |
organ component layer | 3.07e-10 | 24 |
small intestine | 8.51e-10 | 4 |
colon | 6.82e-09 | 2 |
large intestine | 6.82e-09 | 2 |
digestive system | 1.63e-08 | 116 |
digestive tract | 1.63e-08 | 116 |
primitive gut | 1.63e-08 | 116 |
endoderm-derived structure | 2.58e-08 | 118 |
endoderm | 2.58e-08 | 118 |
presumptive endoderm | 2.58e-08 | 118 |
epithelium of mucosa | 6.51e-08 | 9 |
gastrointestinal system epithelium | 6.51e-08 | 9 |
intestinal epithelium | 6.51e-08 | 9 |
subdivision of digestive tract | 1.38e-07 | 114 |