FFCP PHASE1:Mm9::chr2:79095903..79095917,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16401|HGNC=|MCL_coexpression_id=18|UniProt=|association_with_transcript=25bp_to_ENSMUST00000135919_5end|description=CAGE_peak_7_at_Itga4_5end|id=chr2:79095903..79095917,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,1.36e-13,25;CL:0000553,1.28e-12,6;CL:0000556,1.28e-12,6;CL:0000988,4.02e-11,32;CL:0002032,4.02e-11,32;CL:0000037,4.02e-11,32;CL:0000837,4.02e-11,32;CL:0000839,1.73e-08,13;CL:0000763,4.13e-08,16;CL:0000050,4.58e-08,9;CL:0002027,7.35e-07,3;CL:0002006,7.35e-07,3;CL:0002024,7.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.17e-13!70;UBERON:0002193!5.24e-11!48;UBERON:0005057!8.14e-10!51;UBERON:0002390!3.20e-09!45;UBERON:0003061!3.20e-09!45;UBERON:0004177!7.88e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.21e-14,48;UBERON:0002405,1.21e-14,48;UBERON:0001474,7.49e-12,22;UBERON:0004765,7.49e-12,22;UBERON:0001434,7.49e-12,22;UBERON:0002390,2.84e-11,45;UBERON:0003061,2.84e-11,45;UBERON:0002106,4.96e-11,6;UBERON:0004457,4.96e-11,6;UBERON:0000042,4.96e-11,6;UBERON:0004854,4.96e-11,6;UBERON:0009034,4.96e-11,6;UBERON:0002095,4.96e-11,6;UBERON:0004782,4.96e-11,6;UBERON:0003281,4.96e-11,6;UBERON:0009664,4.96e-11,6;UBERON:0002296,4.96e-11,6;UBERON:0005602,4.96e-11,6;UBERON:0001179,4.96e-11,6;UBERON:0006293,4.96e-11,6;UBERON:0003887,1.37e-08,10;UBERON:0002371,4.13e-08,16;UBERON:0000981,6.23e-08,4;UBERON:0003608,6.23e-08,4;UBERON:0003826,6.23e-08,4;UBERON:0008202,6.23e-08,4;UBERON:0004381,6.23e-08,4;UBERON:0007273,6.23e-08,4;UBERON:0010912,6.23e-08,4;UBERON:0002513,6.23e-08,4;UBERON:0004375,6.23e-08,4;UBERON:0010740,6.23e-08,4;UBERON:0010363,6.23e-08,4;UBERON:0003860,6.23e-08,4;UBERON:0002428,6.23e-08,4;UBERON:0010742,6.23e-08,4;UBERON:0002495,6.23e-08,4;UBERON:0003464,6.23e-08,4;UBERON:0003606,6.23e-08,4;UBERON:0005893,6.23e-08,4;UBERON:0009749,6.23e-08,4;UBERON:0010712,6.23e-08,4;UBERON:0010886,6.23e-08,4;UBERON:0005254,6.23e-08,4;UBERON:0010885,6.23e-08,4;UBERON:0010881,6.23e-08,4;UBERON:0010882,6.23e-08,4;UBERON:0007844,6.23e-08,4;UBERON:0001441,6.23e-08,4;UBERON:0011249,6.23e-08,4;UBERON:0002091,6.23e-08,4;UBERON:0003285,6.23e-08,4;UBERON:0004288,6.23e-08,4;UBERON:0010129,6.23e-08,4;UBERON:0006234,6.23e-08,4;UBERON:0002204,3.68e-07,32;UBERON:0003081,5.05e-07,87|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0.140788722151667,0,0.171217968225505,0.0797721589953364,1.71200729931206,0.961624426608971,7.32841475994458,10.1237633694913,3.49780939064073,28.2338637995623,35.1012950030691,36.4975100546306,0.0850432901510698,2.28369187762036,1.82839852397255,2.71987118748791,4.35877634027623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,27.6841299995265,2.90144856804538,2.35265659399725,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,18.3845897389492,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.578397427679647,5.30766331169925,1.13236794963186,6.62524555381181,7.27312879702833,1.86391761218122,0,0,0,0.479260498023681,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0.101839363850316,6.84238338355512,0.252722758433675,0,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,1.13665399758237,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0.146199987425332,0.219550115291051,0.402619256281115,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.505892296994058,0,0,0.123397163921801,0,0.333690211432188,0.196558995113203,1.12431056192427,0.608580364165509,2.17059443777175,3.56476192493988,5.4662266115654,3.40483976227574,2.19649130550465,2.87536413054709,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,2.03228509183265,0,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,1.57635144106191,0.8858587585951,0.797273843287435,2.13022309130459,1.55416483679306,1.44649058581512,1.50791283939272,1.08781136763742,0.491764273019036,0.551873492609465,0,0.234423373184406,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0,5.63873906632914,1.23832120777933,2.40752885580625,5.27431679613135,5.60446333656203,4.34678529092393,0.679913719975421,1.81936888020755,2.48759952847963,0,0,0,0,0,0,0,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0.258319646955462,0.506868376472335,0.234714477291508,0,0.104859344425711,0,0,1.58005560314089,0.405450430580328,0.924398614483445,1.29920822977795,0.179026695667481,0.79472541912506,0.721172697119813,0.738447635872886,0.908698049533329,0.685861259894999,0.201652370273681,1.26695244961678,0.384847366561318,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0,0.207574695168353,0,0,0.486213434136588,0,0.367687016900028,0.888986911206461,0,0,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.448176066834085,0.516919220600519,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.752875043322645,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.593175090620871,0.689531376628944,0,0.464810523557898,0.771626443924566,0.249810577937946,0,0.859484216193193,0.382576664137687,1.10295709559758,1.15933917810211|short_description=p7@Itga4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16401 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENSMUST00000135919_5end | |||
|cluster_id=chr2:79095903..79095917,+ | |||
|description=CAGE_peak_7_at_Itga4_5end | |||
|id=chr2:79095903..79095917,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.36e-13,25;CL:0000553,1.28e-12,6;CL:0000556,1.28e-12,6;CL:0000988,4.02e-11,32;CL:0002032,4.02e-11,32;CL:0000037,4.02e-11,32;CL:0000837,4.02e-11,32;CL:0000839,1.73e-08,13;CL:0000763,4.13e-08,16;CL:0000050,4.58e-08,9;CL:0002027,7.35e-07,3;CL:0002006,7.35e-07,3;CL:0002024,7.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.17e-13!70;UBERON:0002193!5.24e-11!48;UBERON:0005057!8.14e-10!51;UBERON:0002390!3.20e-09!45;UBERON:0003061!3.20e-09!45;UBERON:0004177!7.88e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.21e-14,48;UBERON:0002405,1.21e-14,48;UBERON:0001474,7.49e-12,22;UBERON:0004765,7.49e-12,22;UBERON:0001434,7.49e-12,22;UBERON:0002390,2.84e-11,45;UBERON:0003061,2.84e-11,45;UBERON:0002106,4.96e-11,6;UBERON:0004457,4.96e-11,6;UBERON:0000042,4.96e-11,6;UBERON:0004854,4.96e-11,6;UBERON:0009034,4.96e-11,6;UBERON:0002095,4.96e-11,6;UBERON:0004782,4.96e-11,6;UBERON:0003281,4.96e-11,6;UBERON:0009664,4.96e-11,6;UBERON:0002296,4.96e-11,6;UBERON:0005602,4.96e-11,6;UBERON:0001179,4.96e-11,6;UBERON:0006293,4.96e-11,6;UBERON:0003887,1.37e-08,10;UBERON:0002371,4.13e-08,16;UBERON:0000981,6.23e-08,4;UBERON:0003608,6.23e-08,4;UBERON:0003826,6.23e-08,4;UBERON:0008202,6.23e-08,4;UBERON:0004381,6.23e-08,4;UBERON:0007273,6.23e-08,4;UBERON:0010912,6.23e-08,4;UBERON:0002513,6.23e-08,4;UBERON:0004375,6.23e-08,4;UBERON:0010740,6.23e-08,4;UBERON:0010363,6.23e-08,4;UBERON:0003860,6.23e-08,4;UBERON:0002428,6.23e-08,4;UBERON:0010742,6.23e-08,4;UBERON:0002495,6.23e-08,4;UBERON:0003464,6.23e-08,4;UBERON:0003606,6.23e-08,4;UBERON:0005893,6.23e-08,4;UBERON:0009749,6.23e-08,4;UBERON:0010712,6.23e-08,4;UBERON:0010886,6.23e-08,4;UBERON:0005254,6.23e-08,4;UBERON:0010885,6.23e-08,4;UBERON:0010881,6.23e-08,4;UBERON:0010882,6.23e-08,4;UBERON:0007844,6.23e-08,4;UBERON:0001441,6.23e-08,4;UBERON:0011249,6.23e-08,4;UBERON:0002091,6.23e-08,4;UBERON:0003285,6.23e-08,4;UBERON:0004288,6.23e-08,4;UBERON:0010129,6.23e-08,4;UBERON:0006234,6.23e-08,4;UBERON:0002204,3.68e-07,32;UBERON:0003081,5.05e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0.140788722151667,0,0.171217968225505,0.0797721589953364,1.71200729931206,0.961624426608971,7.32841475994458,10.1237633694913,3.49780939064073,28.2338637995623,35.1012950030691,36.4975100546306,0.0850432901510698,2.28369187762036,1.82839852397255,2.71987118748791,4.35877634027623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,27.6841299995265,2.90144856804538,2.35265659399725,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,18.3845897389492,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.578397427679647,5.30766331169925,1.13236794963186,6.62524555381181,7.27312879702833,1.86391761218122,0,0,0,0.479260498023681,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0.101839363850316,6.84238338355512,0.252722758433675,0,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,1.13665399758237,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0.146199987425332,0.219550115291051,0.402619256281115,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.505892296994058,0,0,0.123397163921801,0,0.333690211432188,0.196558995113203,1.12431056192427,0.608580364165509,2.17059443777175,3.56476192493988,5.4662266115654,3.40483976227574,2.19649130550465,2.87536413054709,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,2.03228509183265,0,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,1.57635144106191,0.8858587585951,0.797273843287435,2.13022309130459,1.55416483679306,1.44649058581512,1.50791283939272,1.08781136763742,0.491764273019036,0.551873492609465,0,0.234423373184406,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0,5.63873906632914,1.23832120777933,2.40752885580625,5.27431679613135,5.60446333656203,4.34678529092393,0.679913719975421,1.81936888020755,2.48759952847963,0,0,0,0,0,0,0,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0.258319646955462,0.506868376472335,0.234714477291508,0,0.104859344425711,0,0,1.58005560314089,0.405450430580328,0.924398614483445,1.29920822977795,0.179026695667481,0.79472541912506,0.721172697119813,0.738447635872886,0.908698049533329,0.685861259894999,0.201652370273681,1.26695244961678,0.384847366561318,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0,0.207574695168353,0,0,0.486213434136588,0,0.367687016900028,0.888986911206461,0,0,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.448176066834085,0.516919220600519,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.752875043322645,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.593175090620871,0.689531376628944,0,0.464810523557898,0.771626443924566,0.249810577937946,0,0.859484216193193,0.382576664137687,1.10295709559758,1.15933917810211 | |||
|short_description=p7@Itga4 | |||
}} |
Revision as of 13:05, 5 August 2015
Short description: | p7@Itga4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Itga4_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 25bp_to_ENSMUST00000135919_5end |
EntrezGene: | 16401 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.36e-13 | 25 |
megakaryocyte progenitor cell | 1.28e-12 | 6 |
megakaryocyte | 1.28e-12 | 6 |
hematopoietic cell | 4.02e-11 | 32 |
hematopoietic oligopotent progenitor cell | 4.02e-11 | 32 |
hematopoietic stem cell | 4.02e-11 | 32 |
hematopoietic multipotent progenitor cell | 4.02e-11 | 32 |
myeloid lineage restricted progenitor cell | 1.73e-08 | 13 |
myeloid cell | 4.13e-08 | 16 |
megakaryocyte-erythroid progenitor cell | 4.58e-08 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 7.35e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.35e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.35e-07 | 3 |