FFCP PHASE1:Hg19::chr7:136553426..136553441,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1951 | |||
|TSSclassifier=strong | |||
|UniProt=P08172 | |||
|association_with_transcript=10bp_to_ENST00000445907_5end | |||
|coexpression_cluster_id=C2880 | |||
|description=CAGE_peak_5_at_CHRM2_5end | |||
|id=chr7:136553426..136553441,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002622;4.36e-09;3!CL:0002195;7.19e-07;2!CL:0002571;7.19e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,3.80e-09,3;CL:0002195,7.98e-07,2;CL:0002571,7.98e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.37e-07;4!UBERON:0007284;1.37e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.57e-30!57;UBERON:0005068!1.57e-30!57;UBERON:0006241!1.57e-30!57;UBERON:0007135!1.57e-30!57;UBERON:0002020!3.92e-27!34;UBERON:0003528!3.92e-27!34;UBERON:0001893!8.16e-27!34;UBERON:0002780!3.04e-26!41;UBERON:0001890!3.04e-26!41;UBERON:0006240!3.04e-26!41;UBERON:0007023!7.53e-26!115;UBERON:0002791!1.08e-25!33;UBERON:0003080!2.18e-25!42;UBERON:0001869!3.74e-25!32;UBERON:0001950!3.54e-24!20;UBERON:0002619!6.67e-24!22;UBERON:0002616!6.83e-24!59;UBERON:0002346!1.20e-22!90;UBERON:0000955!2.57e-22!69;UBERON:0006238!2.57e-22!69;UBERON:0001017!1.04e-21!82;UBERON:0003075!1.37e-21!86;UBERON:0007284!1.37e-21!86;UBERON:0000073!1.67e-21!94;UBERON:0001016!1.67e-21!94;UBERON:0005743!4.25e-21!86;UBERON:0000956!2.44e-20!25;UBERON:0000203!2.44e-20!25;UBERON:0003056!1.56e-15!61;UBERON:0000033!8.80e-14!123;UBERON:0000924!1.04e-13!173;UBERON:0006601!1.04e-13!173;UBERON:0000153!3.17e-13!129;UBERON:0007811!3.17e-13!129;UBERON:0004121!7.67e-13!169;UBERON:0000062!5.38e-12!511;UBERON:0000475!3.30e-11!365;UBERON:0000025!6.48e-11!194;UBERON:0004111!7.50e-11!241;UBERON:0000481!2.99e-10!347;UBERON:0000468!1.01e-08!659;UBERON:0001871!1.68e-08!7;UBERON:0000064!2.04e-08!219;UBERON:0002308!3.27e-08!9;UBERON:0000125!3.27e-08!9;UBERON:0000200!3.91e-08!6;UBERON:0000477!4.04e-08!286;UBERON:0002298!4.77e-08!8;UBERON:0002021!6.71e-08!5;UBERON:0001872!1.04e-07!5;UBERON:0000467!1.14e-07!625;UBERON:0000480!1.32e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.23e-19;20!UBERON:0002619;1.17e-17;22!UBERON:0000956;2.89e-15;25!UBERON:0000203;2.89e-15;25!UBERON:0000160;6.06e-14;17!UBERON:0001869;7.61e-13;32!UBERON:0005409;9.10e-13;22!UBERON:0002791;2.65e-11;32!UBERON:0001893;7.97e-11;34!UBERON:0003528;2.07e-10;34!UBERON:0002020;2.07e-10;34!UBERON:0002021;2.03e-09;5!UBERON:0001872;2.37e-09;5!UBERON:0002780;6.50e-09;41!UBERON:0001890;6.50e-09;41!UBERON:0000922;6.52e-09;49!UBERON:0000059;1.22e-08;11!UBERON:0004921;1.15e-07;33!UBERON:0001155;2.40e-07;9!UBERON:0000073;8.11e-07;53!UBERON:0002616;8.11e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.36e-20,20;UBERON:0002619,7.36e-18,22;UBERON:0000956,1.93e-15,25;UBERON:0000203,1.93e-15,25;UBERON:0001049,9.88e-15,56;UBERON:0005068,9.88e-15,56;UBERON:0006241,9.88e-15,56;UBERON:0007135,9.88e-15,56;UBERON:0011216,2.64e-14,223;UBERON:0000160,5.35e-14,17;UBERON:0002346,6.03e-14,86;UBERON:0001869,2.28e-13,32;UBERON:0003528,1.49e-12,34;UBERON:0002020,1.49e-12,34;UBERON:0001893,2.04e-12,34;UBERON:0000073,2.32e-12,53;UBERON:0002616,2.32e-12,53;UBERON:0003075,3.19e-12,82;UBERON:0007284,3.19e-12,82;UBERON:0002791,1.61e-11,32;UBERON:0002780,1.63e-11,41;UBERON:0001890,1.63e-11,41;UBERON:0003080,1.63e-11,41;UBERON:0006240,1.63e-11,41;UBERON:0005409,4.36e-11,25;UBERON:0001016,1.69e-10,89;UBERON:0000955,8.74e-10,68;UBERON:0006238,8.74e-10,68;UBERON:0001017,1.01e-09,81;UBERON:0002021,1.89e-09,5;UBERON:0001872,3.43e-09,5;UBERON:0007023,5.02e-09,114;UBERON:0010314,9.06e-09,132;UBERON:0000059,1.25e-08,11;UBERON:0010371,1.73e-08,104;UBERON:0004111,3.84e-08,240;UBERON:0004121,6.25e-08,171;UBERON:0000924,6.25e-08,171;UBERON:0006601,6.25e-08,171;UBERON:0001155,2.46e-07,9;UBERON:0000025,5.23e-07,192;UBERON:0005253,8.71e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0.877955241761676,0,0,0.113432183160021,0,0,0,2.40072876867522,0.618315175430633,1.8034837803194,1.48893485065272,0.168776332241266,0.292311015483596,0.757301322732344,0.184099797284599,0,2.4850671476163,1.10827308050404,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,5.88034845542168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.775630294546667,0,0,2.92531928243358,6.24044621468197,0,0,0.266422179016099,6.0050757336422,0,0,0,1.42156779497018,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,2.14114786556594,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0,1.7222167224691,1.27463817604702,4.19598127870157,0,0,0,0,0,0,0,0,0,0.812839312631559,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899362287916574,2.47083326762449,1.17812402345686,0,0,0,0,0,0,1.63799893689583,2.40389234321312,0,0,0,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82870241333667,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.463840490809256,3.99227596002388,0,0,0,0,0,0,0,0,0.520874984799877,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68069372556344,1.22206028986725,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,3.62972148145992,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.886351143382302,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0.509991088181609,0,0.600420288709789,0,0,0.429765441419957,0,5.02708322290058,2.29160424011684,0,1.59743200399193,0.858452096273142,1.78537165953498,3.62790751428322,3.24269895188163,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,0.728994679896296,0,0.0788057072991982,0.314727528809989,0,0,0,8.5763439164804,5.95882773328889,0,0.542999601753713,0,1.30634944043764,0,0,0.170388021785422,0,0,0,2.19781025814636,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.488105059607853,1.502291168478,1.14681839138014,0.776503360757966,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,1.5652351854352,0,0,0,0,0,0,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,6.57731349519759,0,3.1670795075684,0,1.06287460050841,6.07285244869111,0,0,0,0,5.99549104274163,7.34989145647681,0.513833800771676,2.8339315265117,2.87340946302872,1.43581454968528,2.26864526599546,0.414943514785307,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08060135389431,1.56215619722769,2.27355476151302,1.01465296310251,4.37579847214576,0,0,0,0,0,0,0,0,0,0,0,3.33051691586475,0.328863867814245,0,0,0.39246546425257,0.157115589916002,0,11.8710633666234,0,0,0.0714765441766563,0,0,0,7.21540228257228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.926089897295336,2.62271472604749,0,3.92237314806249,0,2.55201007249429,0.297046400327086,3.8039015482506,0,0,0,0,0,0,0,2.92134555298607,0,0.143339583151451,0,0.747906392100062,2.61810414204226,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,4.1458471972939,0.724030971033267,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@CHRM2 | |||
}} |
Revision as of 19:31, 22 January 2014
Short description: | p5@CHRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHRM2_5end |
Coexpression cluster: | C2880_normal_sacrococcigeal_left_heart_stomach_Mesenchymal_smooth |
Association with transcript: | 10bp_to_ENST00000445907_5end |
EntrezGene: | CHRM2 |
HGNC: | 1951 |
UniProt: | P08172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 3.80e-09 | 3 |
hepatic stem cell | 7.98e-07 | 2 |
hepatic mesenchymal stem cell | 7.98e-07 | 2 |